Parus major (Great Tit): 107198793 Help Entry 107198793         CDS       T04864                                  Symbol NCAN Name (RefSeq) neurocan core protein isoform X1   KO K06794   neurocan core protein Organism pmaj  Parus major (Great Tit) Brite KEGG Orthology (KO) [BR:pmaj00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00535 Proteoglycans [BR:pmaj00535]     107198793 (NCAN)    00536 Glycosaminoglycan binding proteins [BR:pmaj00536]     107198793 (NCAN)    04091 Lectins [BR:pmaj04091]     107198793 (NCAN) Proteoglycans [BR:pmaj00535]  Extracellular matrix (ECM) proteoglycans   Aggrecan / versican family    107198793 (NCAN) Glycosaminoglycan binding proteins [BR:pmaj00536]  Hyaluronan   Extracellular matrix or blood plasma proteins    107198793 (NCAN) Lectins [BR:pmaj04091]  C-Type lectins   Group 1: Proteoglycan core proteins    107198793 (NCAN) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Xlink Lectin_C Sushi V-set EGF hEGF Ig_3 Motif Other DBs NCBI-GeneID:  107198793 NCBI-ProteinID:  XP_015471493 Ensembl:  ENSPMJG00000001279 LinkDB All DBs Position Unknown AA seq 1413 aa AA seqDB search MVHVMGDAACWLLLGLSLLPIALLGSQDEGKVIHITRVQHQALRVGLGEPVTLPCLFLLH PSASLGPNEPPEPPRVKWSKVRSATGQREDVPILVAKDNAVKVVKAYEGRVALPGYPRDR SNATLQLRAARASDAGLYRCEVVAGIDDEQDLLPLEVTGVVFHYRPAGQRYALSFPAARR ACRDNSAVIASPQHLQAAFEDGYDNCDAGWLSDQSVRYPITLSRPGCYGDRNSLPGVRSY GRREPAELYDVYCYSRELRGTVFYATEPGRFTWQGARRHCRSRGASLATTGQLYLAWREG LDQCDPGWLADGSVRYPIRQPRRKCGGEASGVRTLYQFPNRTGFPPAASRFDAYCYKAAG DAEEPVLPVPPTPEPPSSDNVLVEHSEELGTSGDTRDIPRDRYHLLPPPGPAGLGEDEDE QLRPARGSPVGQRGDLPATALPPAPAAPGLATGAVTSLPPTAATSLAWPHEEEALNALDQ DPESSRRDPPSASPAPGDPEGPPASLLSHSRSAAPEHGPGSSLAPAGLETVPSAAPETPS TTPGSSSAPRRSYPGLNGRYFQFQRHSRDPAVAAGDPAVASEDPTVAPGDPTVSSEDPTV APEDPTVAPEDPAVAPGDPTVAPEDPAVASEDPTVAPEDSTVTAGDPAVTVGIDIQAVEL QSLPRGGSESPGREGPPASPEALEEEISPELVAAATSPVSLSPRGSGTPAGTPPMPFPSP AAPRDARDHRDIPAAAAQPRVPSARGDSPRPPADATEDFSGDPPSQEGSAPPLPPLPPAP LVAEGPELSPQPRGDTGDGSGAPGDGALERQRKAVTFLQPEGPSEGHRATPGHTEGASPG PRGRSGPTAPHGAAEPSQEQPEEPRDVGNGAAEPSSEAAASPPAWGVPSASPSPAATEVV LWASTERPEEVEPVAEEGSTGFAPPDPQPTHRSELEPGAAEQLLLSPPGPRQPPDPPTVP SHQSAPPAPGEEDSSGEAKREEPPTPLGSATRDPWPSPGVPRPAGTEPAGSPSSGLLFEP SAEPELGGAGGSPLLDTDSGSGEEPALDERELLAWVGTGNASGHAPAEPCHNNPCLHGGT SRANGTVCGCSCAPGFTGENCEIDIDDCLSSPCQNGGTCIDEVNSFVCLCLPSYGGSRCE KDTEGCDHNWHKFQGHCYRYFSRRRSWEDAERDCRRRAGHLTSIHSQEEHSFINGFGHEN TWIGLNDRIVEQDFQWTDNTGLQYENWRENQPDNFFAGGEDCVVLVSHEIGKWNDVPCNY NLPYICKKGTVLCGPPPEVPNAFPVGKKKEKYNIHSSVRYQCHEGFTQRHVPTIKCHSTG KWDRPKILCTKRGRTERGGTGGTGTATSTGSTTSTKPARSGENTGSTSGWTAWRRATTSR AGRAQRGTWPCPPRPSPTLSPPLFFNPLSALAP NT seq 4242 nt NT seq  +upstreamnt  +downstreamnt atggtccatgtgatgggcgatgccgcctgctggctcctgctcgggctctccctcctcccc atcgccctcctgggctcgcaggacgaggggaaggtgatccacatcaccagggtgcagcac caggcgctgcgcgtcgggctgggggagccggtgacgctgccctgcctcttcctcctgcac ccctcggcttccctggggcccaacgagcccccggagcctccccgcgtcaaatggagcaag gtgcgctcggccaccggccagagggaggacgtgcccatcctggtggccaaggacaacgcg gtgaaggtggtgaaggcctacgagggccgggtggctctgcccggatacccccgggaccgc tccaacgccaccctgcagctgcgggcggcccgcgccagcgacgcggggctctaccgctgc gaggtggtggccggcatcgatgatgagcaggacctgctgccgctggaggtgacgggcgtt gtgttccactaccggcccgcgggccagcgctacgccctgagcttccccgccgcccgtcgc gcctgtcgcgacaactccgccgtcatcgcctccccccagcacctccaggccgccttcgag gacggctacgacaactgcgacgcgggctggctcagcgaccagagcgtgcggtaccccatc accctgtcccggcccggctgctacggagaccgcaacagcctccccggcgtgcgcagctac gggcgcagggagcccgccgagctctacgatgtgtactgctactcccgggagctgcgaggg accgtgttctacgccaccgagccgggccgcttcacctggcagggcgcccgcaggcactgc cggagccggggggcatctctggccaccacgggccagctctacctggcctggcgagagggg ctggaccagtgcgacccgggctggctggccgatggcagcgtgcgctaccccatccgccag ccccgcaggaagtgcgggggagaggcctcgggggtgcggaccctctaccagttcccaaat cgcaccggttttccccccgccgcctccagattcgacgcttactgctacaaagccgcgggg gacgcggaggagccggtgctgccggtgccgcccacgcccgagccgccgagcagcgacaac gtgctggtggagcacagcgaggagctgggcacatcgggggacacccgcgacatcccccgc gaccgctaccacctcctgccaccgccggggcccgcggggctgggcgaggatgaggacgag cagctgcggccggcccggggcagcccggtggggcagcgcggggacctcccggccaccgcc ctgccaccggcaccggcggctccggggttggccacgggcgctgtgacatcgctgccgccc accgcggccacctcgctggcgtggccccacgaggaggaggctctcaacgcgctggatcag gatccggagagctcccggagggatcctcccagcgccagcccggcaccaggagaccctgag ggacccccggcctccctcctgtcgcattcccggagcgcagccccggagcacggccccggc tcgtccttggcaccggctgggctggagacggtgcccagcgcggccccggagacccccagc accaccccgggcagctccagcgccccgaggaggagctaccccggcctgaacgggcgctac ttccagttccagaggcacagccgggaccccgcggtggcagctggggaccccgcggtggca tctgaggaccccacagtggcacctggagaccccacggtgtcatctgaggaccccacggtg gcacctgaggaccccacggtggcacctgaggaccccgcagtggcacctggagaccccaca gtggcacctgaggaccccgcagtggcatctgaggaccccacagtggcacctgaggactcc acggtgacagctggggaccccgcggtgacagtgggaattgacatccaggccgtggagctg cagagcctcccccgaggtggcagcgagagccccgggcgggagggtcccccggcgtccccc gaggctttggaggaggagatcagccccgagctggtggccgcggccacctcccccgtgtcg ctgtcgccgaggggctcagggacccccgcagggactccccccatgccgttcccgtccccc gccgctccccgcgacgctcgggaccaccgggacatccccgcggctgccgcccagccccgc gtccccagcgcccgcggggactccccgaggccacccgccgatgccaccgaggacttctcc ggtgaccccccctcccaggagggttccgcgcccccgctgcccccgctgcccccggccccg ctggtggccgagggtcccgagctgtccccgcagccccgcggggacaccggggacggcagc ggggccccgggggacggcgcgctggagaggcagaggaaggcggtgacattcctgcagccg gagggaccctccgagggacaccgcgccacccccggccacaccgagggggcttctccgggg ccccggggccgctccggccccacggctccccacggggcggccgagcccagccaggagcag ccggaggaacccagggatgttgggaatggcgcggccgagcccagcagcgaagcagccgcc tcccccccggcctggggtgtcccctcagcgtccccttcccccgcggccaccgaggtggtg ctgtgggccagcaccgagcggccggaggaggtggagccggtggccgaggaggggtccacg ggcttcgctcccccagacccacagcccacccaccgctccgagctggaaccgggggcagcc gagcagctcctcctgtcccctccgggtccccggcagccccccgaccccccaactgtaccc agccatcagagcgctcccccagcccccggagaggaggactcctccggggaggccaagagg gaagagccccccacgcccctcggctcggccacccgcgacccctggccgtccccaggtgtc ccccgcccggcggggacagagcccgcggggtccccgagctcggggctgctctttgagccc tcggccgagccagagctggggggcgcgggggggtccccgctgctggataccgacagcggc agcggcgaggagccggcgctggacgagcgggagctgctggcctgggtgggcaccggcaac gccagcgggcacgctccggcggagccgtgccacaacaacccgtgcctgcacggagggacg agccgggccaacggcaccgtgtgcggctgcagctgcgccccgggcttcaccggagagaac tgcgagatcgacatcgatgactgcctgtccagcccgtgccagaacggcggcacctgcatc gacgaggtcaattccttcgtgtgcctctgcctgcccagctacggcggcagccgctgcgag aaagacacggagggctgtgaccacaactggcacaagttccagggccactgctaccgctac ttctcccgccggcgctcctgggaggacgcggagcgcgactgtcgccgccgggccgggcac ctcaccagcatccactcgcaggaggagcacagcttcatcaacggctttggccacgagaac acctggatcggcctcaacgaccgcatcgtggagcaggacttccagtggaccgacaacacc ggcttgcaatacgagaactggagggagaaccaacccgacaacttcttcgcgggcggcgag gactgcgtggtgctggtgtcccacgagatcggcaagtggaacgacgtgccctgcaactac aacctgccctacatctgcaagaagggcacagtgctgtgcgggccccccccggaggtgccg aacgctttcccggtgggaaagaagaaggagaagtacaacatccactccagcgtgcgctac cagtgccacgagggcttcacccagcgccacgtccccaccatcaagtgccacagcaccggc aagtgggaccggcccaaaatcctctgcacaaaacgcggtcgcaccgagcgcggcggcacc ggcggcaccggcacagccaccagcaccggcagcaccaccagcacaaagcccgcaaggagc ggcgaaaacaccggcagcacctccggctggacggcatggaggagggccactacttctaga gccgggcgagcacaaagggggacgtggccatgtcccccccgcccctctcccaccctctcc cctcccctcttttttaaccccctttcggctttagctccttag

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