Parus major (Great Tit): 107205814
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Entry
107205814 CDS
T04864
Symbol
USP47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47 isoform X2
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pmaj01002
]
107205814 (USP47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmaj04121
]
107205814 (USP47)
Enzymes [BR:
pmaj01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
107205814 (USP47)
Peptidases and inhibitors [BR:
pmaj01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
107205814 (USP47)
Ubiquitin system [BR:
pmaj04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
107205814 (USP47)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
ubiquitin
Ubiquitin_2
Sad1_UNC
Motif
Other DBs
NCBI-GeneID:
107205814
NCBI-ProteinID:
XP_015486251
Ensembl:
ENSPMJG00000007803
LinkDB
All DBs
Position
5:8913771..8967555
Genome browser
AA seq
1358 aa
AA seq
DB search
MVPSEENQLVPKEAECAAEEPRVLCIIQDTTNSKTVNERVTLNLPASTPLRRLFEDVAAK
VGYENGSFHLLWGNGDGVTATTPIDQNSDKTILDAGFEPGKKNFLHLTDKDGEQPHVMQE
ESGTAEDGAQERFIGPLPREGSMGCSNDYVSQSYSYSSVLSKSETGYVGLVNQAMTCYLN
SLLQTLFMTPEFRNALYKWEFEESEEDPERSIPYQLQRLFVLLQTSKKRAIETTDVTRSF
GWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADLINQLYQGKLKDYVRCLECGYEGWR
IDTYLDIPLVIRPYGCSQAFASVEEALHAFIQPEILDGPNQYFCERCKKKCDARKGLRFL
HFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELDMSVFIDVEDEKSPQTESCTDSGAE
NEGSCHSDQMSNDFSNDDGVDEGICLESNSAAERISKAGSEKSSLLYELFSVMVHSGSAA
GGHYYACIKSFSDDQWYSFNDQHVSKITQEDIKKTYGGSSGSRGYYSSAFASSTNAYMLI
YRLKDPTRNAKFLEAHEYPEHIKQLVQKERELEEQEKRQREIERNTCKIKLFCMHPTKQI
TMENKLEVHKDRTLREAVEIAYKLMDLEEAVPLDCCRLVKYDEFHDYLERSYEGEEDTPM
GLLLGGVKSTYMFDLLLETRRPDQVFQCYKPGEVMVKVHVVDLKAESVAPPISVRAYLNQ
TVSEFKQLISKATHVPADTMRVVLERCYNDLRLLNVASKTLKAEGFFRSNKVFIESSESL
DRHVPYADSQLWKLLDRHANTIRLYIALPEQAPASQLRRALHHKSAAAAASLDEPCERVK
GPVGNMKSVEAILEESTEKLKSLSLQQQQQQQEGDNGDSSKSTEASDFENIESPLNEIDS
SASAENRELDNQIQISDAENLQSEERSDSDVNNDRSTSSVDSDILSSSHSSDTLCNVDNA
PLPLANGLDSHSITSSRRSKANQGKKETWDTAEEDSGTDSEYDESGKSRGEAQYMYFKSE
PYTAEEGSGEGQKWLMVHVDKRITLSAFKQHLEPFVGVPSSLFKVFRVYASNQEFESVRL
NETLSSFSDDNKITIRLGRALKKGEYRVKVYQLLVNEPEPCKFLLDAVFAKGMTVRQSKE
ELLPQLREQCGLDLTIDRFRLRKKTWKNPGTVFLDYHIYEEDINISSNWEVFLEILDGVE
KMKSMSQLAVLSRRWRPSEMKLDSFQEVVLESSSVEELKEKLSEISGIPLENIEFAKGRG
TFPCDISILEIHQDLDWNPKVSTLNVWPLYICDDGAVIFYRDKTEELMELTDEQRNELMK
KESSRLQKTGHRVTYSPRKEKALKIYLDGAPNKDLTQD
NT seq
4077 nt
NT seq
+upstream
nt +downstream
nt
atggtgcccagcgaggagaaccagctcgtccccaaagaggcggagtgtgctgcggaggag
ccgcgggtgctgtgtataatccaggacaccaccaactccaagactgtgaacgagcgtgtc
acgctcaacctgccggcctccacaccgctcaggaggctcttcgaggacgtggctgccaaa
gtgggctacgagaacggctccttccacctgctgtggggcaacggggacggcgtcacggcc
acgactccaatagatcagaacagtgacaaaaccattcttgatgctggttttgagccaggg
aagaagaactttctgcatttgacagacaaggatggtgagcagcctcacgtaatgcaggag
gagtcgggtacagcggaggatggagcacaggagagattcataggtccccttccgagagaa
ggctccatgggatgtagcaatgactatgtcagtcaaagctattcttattcttcagtcctg
agcaagtcagagacaggttatgtggggctggtaaatcaagcaatgacttgctacttgaac
agccttctgcaaacacttttcatgactcctgaatttagaaatgcattgtataagtgggaa
tttgaggaatctgaagaggatcctgagaggagtatcccctaccagctgcaaagactgttt
gttttacttcagaccagcaaaaaaagggcaattgaaacaacagatgttacacggagtttt
ggatgggacagtagtgaagcgtggcagcagcatgatgtgcaggagctttgtagagtcatg
tttgatgctttggagcagaaatggaagcaaacggagcaggctgatcttataaatcaactg
taccaaggcaaactgaaggactatgtgaggtgcctggagtgtggctatgaaggctggaga
atcgacacatacctggatatccctctggtcatccgaccctatggctgcagccaggcgttt
gctagcgtggaagaagcactgcatgctttcattcagcctgagatccttgatggcccaaac
cagtacttttgtgaacgatgtaagaagaaatgtgatgcaaggaagggtctgcggttcttg
cactttccatacctgctgacgttacagctgaagagatttgactttgattacaccacaatg
cacagaattaaactcaatgatcgcatgactttcccagaggagctggacatgagtgtcttt
attgatgtggaagatgagaaatcccctcagacggagagttgcactgatagtggagctgaa
aatgaaggcagttgtcacagtgatcagatgagcaatgatttttctaacgatgatggagtt
gatgaaggaatctgccttgaaagcaatagtgcagcagagaggatctctaaagctggcagt
gaaaagagttctttactgtatgagctcttttctgtcatggttcattctggaagtgctgct
ggtggccattactatgcctgtataaaatcttttagtgatgatcagtggtacagctttaat
gatcagcatgttagcaagataactcaggaagatattaagaaaacatatggaggatcttct
ggaagcagaggctattattccagtgcttttgctagctccacaaatgcttacatgctgata
tacagactgaaagacccaacaagaaatgcaaagtttcttgaggcacatgaatatccagag
cacattaaacaattggtacagaaagagagagaattagaagaacaagaaaagaggcaacgt
gaaattgaacgcaacacgtgcaagattaaattattctgcatgcatcctacaaagcaaata
acgatggagaacaaactggaggttcataaggacagaacactgagagaagctgtggaaata
gcttacaagttgatggatttggaggaggctgttcccctggactgctgccgcctcgtcaaa
tacgatgagttccacgactacctggagcgctcgtacgagggagaggaggatacccccatg
ggcttgttactgggaggggtcaagtcaacctacatgtttgacttactgctggaaacaaga
aggcctgaccaagttttccagtgctataaacctggtgaggtcatggtaaaggttcacgta
gtcgacctgaaggctgaatctgttgctcctccaataagtgtacgagcttatttgaatcag
acagtttcagagtttaagcagctaatttcaaaggccacacacgtgcctgctgacaccatg
cgggtggtgttggagcgctgctacaatgacctgcgcctgctgaacgtggccagcaagact
ctgaaagctgaaggcttttttaggagcaacaaggtgttcattgagagctcggagtccctg
gaccgtcacgtgccgtacgcagactcgcagctctggaagctgctggaccgccacgccaac
accatcagactgtacattgcactgccagagcaggctcctgcctcccagctcaggcgggcc
ctccaccacaaatctgctgccgctgcagccagcttggatgaaccttgtgaaagagtaaaa
ggacctgtaggcaatatgaaatctgtagaggcaattttggaagaaagcactgaaaaactt
aaaagcttgtccctgcagcaacagcagcagcagcaggagggagataacggagacagcagc
aaaagcacagaagccagtgattttgaaaacattgaatcacctttaaatgaaatagactct
tcagcatcagcagaaaacagagaactcgacaaccaaattcagatttctgatgcagagaat
ctgcagtcggaggagcgctcggactcggacgtcaataacgacaggagcacgagttctgtg
gacagtgacatcctcagctccagccacagcagtgacactctgtgcaacgtggacaatgcc
cccctgcccctggccaacggcctggattcccacagcatcacgagcagcaggcgatcaaaa
gccaaccagggcaagaaggaaacctgggacacggcagaggaggattctggaacagacagt
gaatacgacgagagtggcaagagcagaggagaggcacagtatatgtactttaaatcagag
ccctacactgcagaggagggttcaggagaagggcagaaatggctgatggtgcatgttgac
aaaagaattacactgtctgccttcaaacagcacttggagccttttgttggagttccatct
tccctcttcaaagtctttcgagtctatgccagcaaccaagagttcgagagcgttcggctg
aatgagaccctttcatcattttctgatgacaataagataactattagacttggaagagcc
cttaagaagggtgaatacagagttaaagtctatcagctcttggtaaatgagcctgagcca
tgcaagtttctcctagatgcagtttttgctaaaggaatgactgtccgacagtccaaagag
gagctgcttcctcagcttcgagagcaatgtggcctagatttgacaattgacaggtttcgc
ctacggaagaaaacctggaagaatccaggcactgtgtttctggattatcatatctatgaa
gaagatatcaatatttccagcaactgggaagtcttcttagaaatacttgatggagtagaa
aagatgaaatccatgtcacaacttgctgttctatcgagacgatggaggccatcagagatg
aaattagattctttccaggaagttgtactagaaagcagcagtgtggaagaattaaaagag
aagctaagtgaaataagtggaatacccttagaaaacattgaatttgcaaagggtagagga
acctttccatgtgacatttccatactagagattcatcaagacttggactggaatccaaaa
gtatctacattgaatgtctggcccctgtacatttgtgatgatggtgcagtaatattttat
agggataaaactgaagaattaatggaattaacagatgagcaaagaaatgaactgatgaaa
aaagaaagcagcagactgcagaaaactggacaccgggtaacctactctccccgtaaagaa
aaagcactaaaaatttatctggatggagcaccaaataaagatttgactcaagactga
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integrated database retrieval system
