Parus major (Great Tit): 107208657
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Entry
107208657 CDS
T04864
Symbol
WDR33
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33 isoform X1
KO
K15542
polyadenylation factor subunit 2
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107208657 (WDR33)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmaj03019
]
107208657 (WDR33)
Messenger RNA biogenesis [BR:
pmaj03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
107208657 (WDR33)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
eIF2A
Collagen
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
107208657
NCBI-ProteinID:
XP_015492715
Ensembl:
ENSPMJG00000016457
LinkDB
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Position
9:complement(233623..300867)
Genome browser
AA seq
1316 aa
AA seq
DB search
MATEIGSPPRFFHMPRFQHQAPRQLFYKRPDFAQQQAMQQLTFDGKRMRKAVNRKTIDYN
PSVIKYLENRVWQRDQRDMRAIQPDAGYYNDLVPPIGMLNNPMNAVTTKFVRTSTNKVKC
PVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD
HGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERIL
RGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNG
NWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWH
VGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLL
PGMSEDGVEYAPGDDLEPNSLAVIPGMGIPEQLKIAMEQEQMGKDESNDIEMTIPGLDWG
MEEVMQKDQKKVPQKKVPYAKPIPAQFQQAWMQNKVPLPPPPEPLNDRKEDIKLEEKKKS
QAEIEQEMAALQYTNPQLLEQLKIERLAQKQAEQVQPPPPGGSLHGPQPFPGQGPMSQMP
QGFQQPLPPQQMPMNMPQMGPPGPQGQFRPPGPQGQIGPQGPLHQGAGGPQGFMGPQGPP
GPQGPPQGMPRPQDLHGHQGMQRHPGPHGPMGPPGPQGNAGPQGHLGPQGLPGSQTHLGP
QGPPGPQGHLGPQGPPGGQGMQGPPGPRGMQGPLPHGMQGAPGSQGMQGPISQGPLMGLN
PRGMQGPPGPRDNQGPNPQGMMMGHPQEMRGPHIQSGLLGHGPQEMRGLQGPPPQGSMLG
PPQEMRGPPGPQGQQGPPQGSLVGPQGNMQGPQGQPNPSRGPHPSQGPLPFQQQKTPLLG
DGPRPPFNQDGQNPGPPPLIPGLGQQGGQGRLGPHNQGPGLNKGDARGPPNHHLGPLSDR
RHEQNSSGPEHGPERGLFRGGQDWSDGRDRRGPHPDFHDDFDRPDDFRDDFHPDKRFGHR
LREFEGRGGPPLQDEKWRRGGPGPPFPPDHREFEGGGSNRGPPGAWEGRRPSDDRYPRDP
EDARFRGRRDESFRRGGPSRHEGRGPRGRDGFPGPEDFGPDDAFDSPDENSRGRDHGARG
RGRGALRGVRKGLLPTPDEFPRFEGGRKPESWDGNREPGPRPDHPPHDGHSPANRERSSS
LQGMDMASLPPRKRPWHDGPGTSDHRDMDAPGGPPEERGKGRGNSGPSQRAPKSGRSSSL
DGEHHEGFHRDEAFGGGPGAVSNAPRGGRSGSSWGRGNNMNSGQARRGGSRGGRGR
NT seq
3951 nt
NT seq
+upstream
nt +downstream
nt
atggccacagaaatcggctccccgccccggttcttccacatgccgcggttccagcaccag
gcgccgcggcagctcttctacaaacggccggacttcgcgcagcagcaggccatgcagcag
ctcaccttcgatgggaaacgcatgagaaaggctgtcaacagaaagaccatagactacaat
ccttctgtcatcaaatatttggagaatagagtatggcagagagaccaacgagatatgcga
gcgatccagcccgatgcaggatattataatgatttggtccctcctataggaatgctgaac
aaccctatgaatgctgtgacaacaaaatttgttcggacatctactaataaagtaaaatgc
ccagtgtttgttgtcaggtggactcctgaggggagacgcttggtcactggtgcatctagt
ggggagttcactttatggaatggactgactttcaattttgaaacaatattgcaggctcac
gacagccctgtaagggctatgacttggtcacacaatgatatgtggatgctgacagcagac
cacgggggatatgtgaaatactggcagtccaacatgaacaacgtcaagatgttccaggca
cataaggaggcgattagagaggccagtttctcacccacggataataaatttgctacatgc
tctgacgacggcactgttagaatctgggactttctacgttgccatgaggagagaattctt
cgaggccatggagcagatgtgaaatgtgttgactggcatccaacaaagggcttagttgtt
tcaggaagtaaagatagccaacagcccatcaagttctgggatccaaagactggccagagt
cttgccacactacatgctcacaaaaacacagtgatggaggtgaaactgaatctcaatggc
aactggctgctgacagcttctcgtgaccacctctgtaagctctttgacatccggaacctg
aaagaagaacttcaggtcttcaggggtcataagaaggaagccacagctgtggcctggcat
cctgttcacgaagggctgtttgccagtggagggtctgatgggtccttgttgttctggcat
gttggggttgagaaggaggttggtggaatggaaatggcccatgaaggaatgatctggagt
ctagcatggcatcccctcggacacattctgtgttcaggctcaaatgatcacaccagcaag
ttttggactagaaatcggcctggagataaaatgcgggatcgttacaacttgaacctgctg
cctgggatgtcagaggatggtgtggaatatgctccaggagatgatctggagcccaacagt
ctggcagttattcctgggatgggaatacctgaacagttgaaaatagccatggagcaggag
cagatggggaaagatgagtccaatgacattgaaatgacaatcccaggactggactgggga
atggaggaagtaatgcaaaaggaccaaaagaaagtgccacagaaaaaagttccctatgca
aaaccaataccagcacagtttcagcaggcatggatgcaaaataaagttcctttgcctccc
ccacctgagccattgaatgatagaaaggaggatattaaactggaggagaaaaagaaatca
caggcagagattgagcaagaaatggcagcacttcagtacacaaacccacaactcctggag
caactgaagattgagagacttgcacaaaagcaagctgagcaagtgcagccaccaccccca
ggaggatctcttcatggacctcagcctttcccagggcaaggcccaatgtcacagatgcct
caagggtttcagcagccccttccacctcagcagatgccaatgaatatgccacagatggga
cctcctggtccacaaggacagttcagacctccaggaccccaaggacaaataggacctcaa
ggtccattacaccaaggagctggaggtccacaagggttcatgggaccacaaggacctcca
ggcccccaagggcctccacaaggaatgccacggcctcaggatttacacggacatcaagga
atgcagagacatccgggccctcatgggccaatggggcccccaggtccacagggtaacgct
ggcccacagggacacctgggaccacagggcctgcctgggtctcagactcatttaggacca
cagggcccacctggcccacaaggtcacttgggtcctcagggtccccctggaggtcaaggg
atgcagggaccacctggtccacgaggaatgcaaggacctcttccccacggcatgcaagga
gctccgggatctcaagggatgcagggccctatatcccaagggcctttgatgggacttaat
cctagaggaatgcagggtccaccaggacccagagataaccagggacctaatccacagggg
atgatgatgggtcatccacaagaaatgagaggtcctcatatacaaagtggcttactagga
catggtccccaggagatgcggggccttcagggacccccacctcaaggttcaatgctggga
ccgccacaagaaatgcgtgggccacctggtccccagggccagcagggacctccacaaggc
tctttggtggggcctcaaggaaacatgcaaggacctcagggacagccgaacccttcgaga
gggccgcacccttcccagggccctctgcccttccagcagcagaaaacacctctgttgggt
gatgggcctcgtcccccattcaatcaggatggacagaacccaggtcctcctccactgata
ccaggcctgggacagcaaggaggacaaggtcgtctgggccctcacaaccaaggtcctggt
cttaataaaggtgatgcccgggggccacccaaccatcacctgggcccgctgtcggacaga
cggcacgagcagaacagcagcggccccgagcacgggccggagaggggcctgttccgaggg
ggccaggactggagtgatggcagggacagacggggacctcaccccgatttccacgatgac
tttgatcgaccggacgacttccgtgacgatttccacccagataagagatttggccatcga
ttacgagagttcgaggggagaggaggcccgccgttgcaagatgagaaatggagacgaggt
ggacccgggcctccctttcctcctgatcacagggagtttgaaggaggtggttccaaccgt
ggccctcctggtgcttgggaaggacggagaccttcagatgacagatacccgcgggacccg
gaggatgcgcgcttccgaggaaggcgagatgagagcttccgaagaggaggaccctcaaga
catgagggccggggacccaggggcagagatggctttcctggccctgaagattttgggcca
gatgatgcttttgactctccggatgaaaactccagaggaagggatcatggtgctcggggg
cgaggtcgaggtgctctcagaggagttcggaagggtttgcttcctactccagatgaattc
ccacgctttgaaggagggcggaaaccggaatcctgggatggaaacagagaaccaggtcct
cgtccagatcaccctcctcatgatgggcactctccagccaacagagaacgttcctcttca
ctccagggcatggacatggcctcactgccaccacggaaacgcccctggcatgatggacca
ggaacctctgaccacagagacatggatgctccaggtggacctccagaggagaggggcaaa
ggacgaggcaattcaggaccttcacagagagctccaaaatctgggaggtccagttctcta
gatggagagcaccatgagggattccacagggatgaagcctttggtggaggccccggggca
gtcagtaacgctcctcgaggaggaaggagcggcagcagctggggaagaggaaataacatg
aactctggccaggcccggagaggaggatctcggggcggacggggccgatag
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