Parus major (Great Tit): 107211139
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Entry
107211139 CDS
T04864
Symbol
RBFOX1
Name
(RefSeq) RNA binding protein fox-1 homolog 1 isoform X2
KO
K14946
RNA binding protein fox-1
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmaj03041
]
107211139 (RBFOX1)
Spliceosome [BR:
pmaj03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
107211139 (RBFOX1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
SPESP1
RRM_5
Motif
Other DBs
NCBI-GeneID:
107211139
NCBI-ProteinID:
XP_015498204
Ensembl:
ENSPMJG00000010311
LinkDB
All DBs
Position
14:3167922..4276771
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AA seq
540 aa
AA seq
DB search
METPQKPHASGAYCFHERSLLSDTKAECSSGVETEDRKSSKQQMSCEREQLRKLKAFRWL
FSPVLSEDGTSCSLLLPDWLFPVSACFRRRTATLCWVENFRATPLGKADVGFAPDRSYLV
LALSLEEVGVLLHPYGVPMILPAAPYFAGLVQGNQEATAPPDTMAQPYASAQFAPPQNGI
PAEYTAPHPHPAPDYTGQTTVPEHTLNMYPPAQTHSEQSAADTNAQTVSGTATQTDDAAQ
TDGQQQTQSSENTENKSQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKG
FGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKTVNPYTNGWKLNPVVGA
VYSPEFYAGRVLLCQANQEGSPVYSAPSSLVYTSTMPGFPYPAATAAAAYRGAHLRGRGR
TVYNTFRAAAPPPPIPAYGGVVYQDGFYGADIYGGYAAYRYAQPATATAAAYSDSYGRVY
AADPYHHTLAPAATYGVGAVNAFAPLTDAKTRSHADDVGLVLSSLQASIYRGGYSRFAPY
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggaaactccacagaagccccatgcgagtggtgcctattgtttccatgagcggagcctc
ctctcagacactaaagcagagtgcagttctggtgtagaaactgaggacagaaaaagttca
aaacaacagatgagttgtgaaagagaacagctaaggaagttgaaggcctttagatggctt
tttagtcctgtcctctctgaggatgggacatcctgcagccttctgctcccagactggctt
ttcccagtgtctgcctgctttaggagaagaactgcaactctctgctgggtggagaacttc
agggcaacacccttgggcaaagctgatgtgggctttgcccctgacagaagttatttggtt
ctagctctgagtttggaagaagttggagttttgctacatccctatggagtgccaatgatt
ctgccggcagcaccatacttcgctggacttgttcagggtaatcaggaagctacagcacct
cctgacacaatggcacagccttatgcctcagcccagttcgctccacctcagaacggtatc
cctgcagaatacacagccccacatccgcatccagctccagactacacaggccaaaccact
gttccagagcacacgttaaacatgtaccctcctgctcagacacactccgaacagagtgca
gctgacacaaatgcacaaactgtctccggcacagccacacagacagatgatgcagcacag
accgatggccagcaacagacacaatcttctgaaaacacagaaaacaaatcacagccaaaa
cggctccacgtctcaaatataccattcagattccgggatccagatcttagacaaatgttt
ggtcaatttggtaaaatcttagatgttgaaattatttttaatgagcgaggctcaaaggga
tttggtttcgtaactttcgaaaatagtgctgatgcggacagggcgagggagaaattacac
ggcaccgtggtagagggccgtaaaatcgaggtaaataatgccacagcacgtgtaatgaca
aataaaaagaccgtcaacccttacacgaatggctggaaattaaatccagttgttggtgca
gtttatagtccagagttctatgcaggcagggtgctgctgtgccaggcaaaccaggaggga
tctcccgtgtacagtgcccccagttcactagtatacacatccacaatgccaggatttccc
taccctgccgccaccgcagctgccgcgtaccggggtgcgcacctacgaggccgaggtcgc
acggtgtacaacacgttccgagcagcggctccccctcctcccatcccagcctacggcggt
gttgtataccaggatggattttatggtgcagacatttatggtggttatgctgcctaccgg
tatgcccagcctgccactgccactgcagctgcctacagtgacagttacggacgagtttat
gctgcagacccctaccaccacacacttgctccagcagccacctacggcgttggtgccgtg
aatgcttttgcacccttgactgatgccaagactaggagccatgctgatgatgtcggtctc
gttctttcttcattacaggctagtatataccgagggggatacagccgttttgctccatac
taa
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