Pecten maximus (king scallop): 117326224
Help
Entry
117326224 CDS
T07399
Name
(RefSeq) LOW QUALITY PROTEIN: THO complex subunit 1-like
KO
K12878
THO complex subunit 1
Organism
pmax
Pecten maximus (king scallop)
Pathway
pmax03013
Nucleocytoplasmic transport
pmax03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmax00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117326224
09122 Translation
03013 Nucleocytoplasmic transport
117326224
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmax03019
]
117326224
03041 Spliceosome [BR:
pmax03041
]
117326224
Messenger RNA biogenesis [BR:
pmax03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
117326224
Spliceosome [BR:
pmax03041
]
Complex C
Other components
EJC/TREX
117326224
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
117326224
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Death
Motif
Other DBs
NCBI-GeneID:
117326224
NCBI-ProteinID:
XP_033738778
LinkDB
All DBs
Position
4:44980028..44997090
Genome browser
AA seq
646 aa
AA seq
DB search
MAASMMFEFGKARNDFKVLVEKTIKNQTADKYVADFRSYSGGDTEKKLAMDQALRDVMHT
SVTSRPDYEMCRSVINAAIELATQEACAPSTPFLLLSDVFDIITLSQCEELFCLVEDRLS
TWKSETFYTAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLSRLFPLSEKSALNLMSQF
NLENVTTYTTKADRFETELKGDGMEVEEGETEDHPKPVDYNLYRRFWALQDFFRKPTQCY
EKVPWKMFQMNSDEVLNAFNSAKLDDMKSSRKKLAMPRPADTPAFFAKYLTSEKLMDLQL
NDSNFRRYVLVQFLILFQYLNSQVKFKGSNQTLTDEQSQWVKNTQEKVYQLIRETPPEGE
QFASNVEHILSREEYWNEWKNDGCPSYEREKSTDSKQRTKAKRRWVGDDLQASGGKIIKM
GSSELTRLWNINPNNMGACRAEKRLFLPTLEDYFAEAMDQADPEAMVEDEYKMINEQIFQ
WKSLRLLARRSPHFFTHTNKPAIPLSEYLEAMLNKIAKEIPQTANNEEMKTEIGEEEEAI
QERQEMEEQNDEQGKENTEDNLTPPMLDQLAAILKGEWKKLATELNFPEDDISYFETESS
DEKQQALKMLTVWHGNEGDRATVGTLKIALKEVGLTDAIQSVFGKS
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atggcagcttccatgatgtttgagttcgggaaagcaaggaacgattttaaggttctggtg
gagaagactatcaagaaccaaacagcagataaatatgtggcagattttcgttcctacagt
ggtggtgatacggagaagaaactggcgatggatcaagccttaagagatgtgatgcacaca
tctgtgaccagtcgtccagactatgaaatgtgtcggtcagttatcaatgctgctatagaa
ctagccactcaagaggcttgtgcaccatccacgccgttcctgttgttgtccgatgtgttt
gacatcatcactctgagtcagtgtgaggaactcttttgtcttgtggaggatagattaagt
acctggaagtcggaaacattttatactgccggaaaaaactacttacttaggatgtgtaat
gatcttctccgcagactctctaaatctcagaatactgtcttttgtggacgtatacagctg
tttctttcccgactgtttcctttatcagaaaaatcagcgttaaatcttatgagtcagttc
aacctggagaatgttacaacgtacacaacaaaagctgacagatttgagacagagttaaag
ggagacggaatggaagtagaagagggagaaacagaggaccatccaaaacctgttgactac
aatttgtacaggagattctgggcattacaagatttcttcagaaaaccaacacagtgctac
gaaaaagttccatggaaaatgtttcaaatgaattccgatgaagtacttaatgccttcaac
agtgctaagctggacgatatgaaatcttcacgtaagaaacttgccatgcctcggcctgcc
gacacacctgccttctttgcgaagtacctgaccagtgaaaagctaatggatctgcagcta
aacgacagtaacttccgtagatacgtcctcgtccagttcctcatcctgttccagtaccta
aattcacaggtgaagtttaaaggaagtaatcagacattgactgatgagcagagtcagtgg
gttaagaacacgcaggagaaggtttaccaactgatcagagagacgccaccagagggagaa
cagtttgcaagtaatgtagagcacattttgtcgagggaggaatactggaacgaatggaaa
aatgatggctgccctagttacgagagagagaaaagcacagacagcaaacagagaacaaag
gcgaagcgacggtgggttggagacgatcttcaggccagcggcggaaaaatcataaagatg
gggagttctgagctaacacgtttgtggaatatcaatcccaacaacatgggagcatgtcgg
gccgaaaaaagattatttttaccaacgttggaagattattttgctgaggcaatggatcag
gcagacccagaagccatggtagaagatgaatataaaatgatcaacgagcagattttccaa
tggaagtcgctacgcttattagcacgacgaagtccccactttttcacacacaccaacaag
cctgcaatcccgttgtcagaatatctagaagccatgctcaacaagatcgccaaggaaatc
ccacaaacagccaataatgaagaaatgaaaaccgagatcggcgaggaggaggaagcgata
caggaacgacaggagatggaagaacaaaatgatgaacaaggcaaagaaaacacagaggac
aacctaacaccgcccatgctggatcagctggctgccatactgaagggagagtggaagaaa
ttagcaactgaactcaacttcccagaggacgatatatcgtactttgagaccgaatcaagt
gatgaaaaacagcaggctttaaaaatgcttactgtatggcatggtaatgaaggtgaccgt
gctacagttgggacactgaagatcgccctgaaggaggtcggactcacagatgctatacag
tccgtgttcggcaaatcttga
DBGET
integrated database retrieval system
