Pseudoalteromonas maricaloris: R5H13_10860
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Entry
R5H13_10860 CDS
T09524
Symbol
rluC
Name
(GenBank) 23S rRNA pseudouridine(955/2504/2580) synthase RluC
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
pmaz
Pseudoalteromonas maricaloris
Brite
KEGG Orthology (KO) [BR:
pmaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmaz03009
]
R5H13_10860 (rluC)
Enzymes [BR:
pmaz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
R5H13_10860 (rluC)
Ribosome biogenesis [BR:
pmaz03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
R5H13_10860 (rluC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
WOX27174
LinkDB
All DBs
Position
1:complement(2477721..2478671)
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AA seq
316 aa
AA seq
DB search
MSEKPALQVSFVTVTEDQEGQRIDNFLVTHLKGVPKSAVYKILRKGEVRVNKKRVKPVYK
LQINDEIRIPPVRVAEKTEFVPKNLDKVANLEDAILYEDKYLIVINKPAGMAVHGGSGLS
YGLIEALRALRPQEQSLELVHRLDRDTSGCLLISKRRAVLKGLHEQLREKTMEKNYLALV
SGQWDAKHKNVTEPLRKNTLKSGERVVRVDHEQGKPSHTRFRVVERFESATLVQASPVTG
RTHQIRVHTQCKGHPIACDDKYGDQVFDAKMREVGLNRLFLHAKELRFMHPKTETTHHVE
APLDGALEACLVKLRK
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagaaacccgcattacaagttagctttgttaccgtgactgaagaccaagaaggt
caaaggatcgataactttttagttacgcatttgaaaggggtgccaaaaagcgccgtatat
aaaattcttcgtaaaggggaagtgcgggtaaacaaaaagcgggtgaagcctgtatataaa
ctacaaatcaatgatgaaatccgtatcccacctgtgcgtgttgcggagaaaacagagttt
gtgcctaaaaatctagataaagtcgcaaacttagaagatgccattctttatgaagataag
tatctgatagttataaataagcctgccggtatggcggtacatggtggcagcggcttaagc
tatggcttaattgaagcattaagagcattacgcccacaagagcaaagcttggagttggtt
caccgtttggaccgcgacacatcgggttgtttgttgatttcaaagcgccgcgctgtgctt
aaaggacttcatgagcagctaagagaaaagaccatggagaaaaattaccttgcgctggtt
tcagggcaatgggatgccaaacataaaaatgtcaccgaaccgctacgtaaaaatacctta
aagtcaggtgagcgagtggtgcgagtggatcatgagcaaggcaagccttctcatactcgt
tttagagtcgttgagcgttttgagtccgcaactttagtgcaggcgtcacccgtaacaggt
agaacgcaccagatccgagtgcatacacaatgtaaaggacatccgattgcgtgtgatgat
aagtatggcgatcaggtgtttgatgccaaaatgcgtgaagtgggattaaatagactgttt
ttgcatgccaaagaactcagatttatgcacccaaaaacagaaacgacacaccatgtagag
gcaccattggatggggctttggaagcatgcttagttaaattgaggaagtaa
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