Pseudomonas mediterranea: E3Z27_01450
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Entry
E3Z27_01450 CDS
T08284
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
pmed
Pseudomonas mediterranea
Pathway
pmed00521
Streptomycin biosynthesis
pmed00523
Polyketide sugar unit biosynthesis
pmed00541
O-Antigen nucleotide sugar biosynthesis
pmed01100
Metabolic pathways
pmed01110
Biosynthesis of secondary metabolites
pmed01250
Biosynthesis of nucleotide sugars
Module
pmed_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
pmed00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
E3Z27_01450 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
E3Z27_01450 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
E3Z27_01450 (rfbC)
Enzymes [BR:
pmed01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
E3Z27_01450 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QHA80434
UniProt:
A0A6I6PS96
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All DBs
Position
complement(335958..336503)
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AA seq
181 aa
AA seq
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MNVIATRLPDVLIIEPKVFGDDRGFFYESFNARAFAEATGCDLQFVQDNHSRSTKGVLRG
LHYQIEQAQGKLVRVIAGEVLDVAVDIRRSSPTFGQWESVRLSAQNQRQLWIPPGFAHGF
MVLSESADFLYKTTDYYAPVAERCIRWDDPDLAIDWELEGAPTLSSKDQNGKFLHEADLF
P
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
ttgaacgtcatcgccacccgactgccggatgtcctgatcatcgagccgaaagtcttcggc
gacgaccgcggctttttctacgaaagcttcaatgcccgggcattcgccgaggccactggc
tgcgacctgcagttcgtccaggacaaccattcacgctcgaccaaaggcgtgctgcggggc
ctgcattatcagatcgaacaggcccaggggaagctcgtgcgagtcatcgccggcgaagtg
ctggacgtggctgtggacattcgccgcagctcgcccactttcggccagtgggagagcgtg
cgtctgtcggcgcagaaccagcggcagctgtggattccgccaggcttcgcccacggtttc
atggtactgagcgagtcagcggattttctctataaaaccaccgattactacgcgcccgtg
gccgaacgctgcatccgttgggacgatccggacctggccatcgactgggagctggagggc
gcgcccaccctctcgtccaaggaccagaacggcaagttcctgcatgaggccgaccttttc
ccatga
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