Poecilia mexicana (shortfin molly): 106911094
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Entry
106911094 CDS
T08022
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
pmei
Poecilia mexicana (shortfin molly)
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmei04121
]
106911094
Ubiquitin system [BR:
pmei04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
106911094
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRY
zf-B_box
SPRY
CALCOCO1
OrfB_IS605
MAP65_ASE1
PRP1_N
Motif
Other DBs
NCBI-GeneID:
106911094
NCBI-ProteinID:
XP_014833319
LinkDB
All DBs
Position
Unknown
AA seq
526 aa
AA seq
DB search
MSCIQSFWDKKGKKKHHSCPQCRQTFAPRPALVKNTMLAALVEQLKLTGLQAAAADHAGP
EDVACDVCPGRKQKAVRSCLNCLASYCEKHLQPHYSAAPLQKHKLVEPSKKLLENICSRH
DEVMKVFCLTDQQCICILCTMDEHKGHETAPAAAERAKRQKELEENQRQIQKKIEDQEKE
LKRLQQEVKDACVSADEAVKSTEKIFTELITLLQKRRSEVKQQIRSQQKAQVLRVKEVQE
KMEQELNDLKRRDAELEKLSHTEDHNQFLQSYASLSTPSDLADSSGINADPLRHFEDVTA
AASELRDKLQDILRDAETHILQTVSSSRPEPKSRAEFLKYACEISLDPNTAFRTLLLSNE
NRAAIVWYEDESFTPSPERFSSCRQVLSRQSLTGRCYFEFKWAGIGIFVAVAYKSIKRGG
RANESLFGFNDQSWALRCDIEHISWKGAGYTFSHNKAETPVSGPQSYKLGVYLDHSAGVL
AFYDVSETMTLLHRVQTTFTQPLYAGLGFFFCDGGNAEFCNLKETE
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgagctgcattcaaagcttctgggataaaaagggtaagaagaaacatcacagctgccct
cagtgcaggcagacttttgcaccaaggcctgctctggttaaaaacacaatgttagcagct
ttggtggagcagctgaagctgactggactccaggctgctgctgctgatcatgctggacct
gaagatgtggcctgtgacgtgtgccctgggaggaagcagaaggccgtcaggtcgtgtctc
aactgtttggcttcctactgtgagaaacacctccagcctcactacagcgccgctccgctg
cagaaacacaagctggtggagccctccaagaagctcctggagaacatctgttctcgtcac
gatgaggtgatgaaggttttctgtctcaccgatcagcagtgcatctgcatcttgtgcacc
atggatgaacacaaaggccatgaaacggctccagctgcagctgagagggcaaagaggcag
aaggagctggaggagaatcaacggcaaatccagaagaaaatcgaggaccaggagaaggag
ctgaagaggctccagcaggaggtgaaggatgcctgcgtctctgctgatgaagcagtgaag
agtacggagaagatcttcactgagctgattactctcctccagaaaagacgctctgaggtg
aagcagcagatcagatcgcagcaaaaagctcaggtgcttcgggttaaggaggttcaggag
aagatggagcaggagctcaatgatctgaagaggagagacgctgagctggagaagctttca
cacacggaagatcacaaccagttcctgcaaagctacgcctcgctgtcaacccccagcgac
ctcgcagactcatccggcatcaacgccgatcctctgaggcacttcgaggacgtgacagca
gctgcgtccgagctccgagacaaactgcaagacatcctgagagacgctgagacacacatc
ctccagacagtgtccagttcccgaccggagccaaagagcagagctgaattcctgaaatac
gcctgtgaaatcagtctggatccaaacacagctttcagaacgctattactgagcaacgag
aacagagcagcaatagtgtggtacgaggacgagtccttcactcctagcccggagagattc
agctcttgcagacaggtgctgagcaggcagagcctgaccggacgatgctactttgagttt
aaatgggctggaataggaatttttgtagcagttgcatacaagagcatcaagagaggaggg
agagcaaatgaatcgctgtttgggtttaatgatcagtcgtgggcgctacgctgtgacatt
gagcacataagttggaaaggagctggttacactttcagtcacaacaaagcagagactcca
gtgtcaggtcctcagtcatacaaactgggagtgtacctggatcacagtgcaggtgttctg
gctttctatgatgtctctgaaaccatgactctgctccacagagtccagaccaccttcact
cagccgctctacgctggacttggcttttttttctgtgatggaggcaatgcagagttctgc
aacctcaaagaaacagaataa
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