KEGG   Poecilia mexicana (shortfin molly): 106914134
Entry
106914134         CDS       T08022                                 
Symbol
smndc1
Name
(RefSeq) survival of motor neuron-related-splicing factor 30
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
pmei  Poecilia mexicana (shortfin molly)
Pathway
pmei03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pmei00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106914134 (smndc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pmei03041]
    106914134 (smndc1)
Spliceosome [BR:pmei03041]
 Complex A
  U2 snRNP components
   U2 related factors
    106914134 (smndc1)
 Complex B
    106914134 (smndc1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    106914134 (smndc1)
SSDB
Motif
Pfam: SMN_Tudor TUDOR DUF2730 Phage_GPO
Other DBs
NCBI-GeneID: 106914134
NCBI-ProteinID: XP_014836224
Ensembl: ENSPMEG00000012288
UniProt: A0A3B3X5K2
LinkDB
Position
Unknown
AA seq 238 aa
MSEDLVKQLSSYKAQLQQVEVALSTDPDNEDLLKLQKDLQEVIDLTKDLLSSQPADGSSS
TSGSESVPVKKSWKVGERCLATWSHDGQVYEAEIEEIDRENGTAAVTFTEYGNAEVIPLQ
NLKAVEEGKRSDDDGGLKSKSRKEQIAEQREYKKKKAQKKVQRMKELEQEREDQKSKWQQ
FNNKAYSKNKKGQVKRSIFASPESVNGKVGVGTCGIADKPMTQYNDTSKYNVRHLMPQ
NT seq 717 nt   +upstreamnt  +downstreamnt
atgtcggaagatctggtgaaacagttgagcagctataaagctcagttacagcaagtagaa
gttgccttatcaaccgatccagataatgaagacctcctaaaacttcagaaggacttgcag
gaagtcatcgatctgactaaagatctcctgagttcgcagcccgctgatgggtcttccagc
accagcggctcagagtcggtgccagtgaagaaaagctggaaagtgggtgaacgatgtttg
gcaacgtggagccacgatggccaggtgtatgaagctgagattgaggagatagacagagag
aacggcactgcggccgttacgttcacagagtacgggaatgctgaagtgattcctctgcag
aacctcaaagccgtggaggaagggaaacgatctgacgatgacggaggtttaaagtcaaag
tcaagaaaagagcaaatagcggagcagcgagagtataagaagaagaaagctcagaaaaag
gtacagaggatgaaggagctggagcaagagagggaggaccagaagtctaagtggcaacag
ttcaacaacaaagcttactcaaagaacaagaaaggacaggtaaagagaagcatatttgca
tcaccagaaagtgtaaatggaaaggtgggagtgggaacatgtggcattgcagacaaacct
atgacccagtataacgacacatccaaatacaacgtcagacatctgatgccacaatga

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