Poecilia mexicana (shortfin molly): 106918112
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Entry
106918112 CDS
T08022
Symbol
usp47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47 isoform X1
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
pmei
Poecilia mexicana (shortfin molly)
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pmei01002
]
106918112 (usp47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmei04121
]
106918112 (usp47)
Enzymes [BR:
pmei01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
106918112 (usp47)
Peptidases and inhibitors [BR:
pmei01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
106918112 (usp47)
Ubiquitin system [BR:
pmei04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
106918112 (usp47)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
Ubiquitin_2
Motif
Other DBs
NCBI-GeneID:
106918112
NCBI-ProteinID:
XP_014843080
Ensembl:
ENSPMEG00000016056
LinkDB
All DBs
Position
Unknown
AA seq
1377 aa
AA seq
DB search
MEMVPSEENQFVPKEGLFWSCRQSVIDEIKRISQIHNAAEEPRVLCIIQDTTSAKTVNER
LTLNLPASTTLSKLYEDVAHKARYVNGSFDLAWGNAQNMAPLEHNSEMSLSDSSFEPGGK
KNFLQLTDKDGEQPQIASDESGTADSSGLDDSSQERFIGPLQRDGSAGGSGDYSSPSYSY
SSILSKSETGYVGLVNQAMTCYLNSLLQTLFMTPEFRNALYNWEFEESEEDPVTSIPYQL
QRLFVLLQTSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADL
INQLYQGKLKDYVRCLECGYESWRIDTYLDIPLVIRPFGASQAYGSVEEALQAFIQPETL
DGPNQYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELD
MSPFIDVEDEKSPQTESCTDSGAENEGSCHSDQMSNDFSTDDCVDEGICLDSTSSTERAL
KPKSLLTFELFSVMVHSGSAAGGHYYAYIKSFSDGQWYSFNDQHVSKITQDDIRKTYGGS
SGSRGYYSSAFASSTNAYMLIYRLKDPSRNSRFLSVEDFPEHIKSLVQKEKESEEQEKRQ
REIERNTCKIKLFCVHPVKMMMESKLEVHKDKILREATEMAYKLMELEGVVPLDCCRLVK
YDEFHEYLERSYEGEEDTPMGLLLGGVKSSYMFDLLLETRRPDQVFQPYKPGEVMVKVHV
VDLKTETITLPISVRAYLNQSITEFKQLIAQATGLSAETMRVVLERCYNDLRLLYVPNKT
LKAEGFFRSNKVFVESSELTDHQVPFTDSLLWKLLDRHGNTIRLFVLLPEQSPGTLASRT
LCQKAGEDSDGPFEGSKGNRKSVEAILEESTEKLKNLSLQQQQQQGSSASDSQKSSDTSD
FEHIESPTQEADSNSSLCVAADSRELENRISGSSDTENQFVCEERSDSEVNNDRSTSSVD
SDILSSSHSSDTLCNADSGPIQLANGLDSHSITSSRRSKAHEGKKETWDTAEEDSGTDSE
YDDNGKSKAEAQYLYFRAEPYSQDDASWDTHKCLVLHVDKRITLAAFKQNLEPYVGVPSS
QFKVFRVYANNQEFESVRLNETLSSFSDDNKITIRLGRALKKGEYRVKVFQLLVNEPEPC
KFLVDTVFAKGMTVRQSKEELLPQLKEQCKLDLSIDRVRLRKKTWKNPGTVFLDYHVYEE
DISISSNWEVFLEVLDDSEKMKSMSQLAILTRKWNPATMNLGPFQEAILESSSVEELKEK
LSEMSGIPLENLEFAKGRGTFPCDISVLEIHQDLDWNPKVSTLNVWPLYICDDGAVVFYR
DSRDEPLELSEDERNELMKKESSRLLKTGHRVSYSPRKEKALKIYLDGGPVRDPGQD
NT seq
4134 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggtgcctagcgaggagaaccagttcgtacccaaagagggcttgttttggagt
tgcagacagagtgttattgatgaaataaagaggatttcacagatacataatgcagctgag
gagcccagagtgctgtgcataattcaggacacgaccagcgcgaagacggtcaacgagagg
ctgaccctcaacctgcccgcttccaccactctctccaaactttacgaggacgttgcccat
aaggccagatatgtgaatggctcttttgacctcgcctgggggaacgctcagaacatggca
ccactggagcacaacagtgagatgtccctctctgattctagctttgagcccggcggtaag
aagaattttctccagcttacagataaagatggagagcaaccacagattgcatcggatgag
tcaggaacagcagatagcagcgggctggatgacagttcccaggagcggtttatcggcccc
ctgcaaagagacggcagcgcgggcggcagcggtgactacagcagtccgtcgtattcctac
tcatccatcctcagcaaatctgagaccggttatgttgggttggttaaccaagcaatgacc
tgctatctgaacagtctcctccaaacactgtttatgactcctgagtttagaaatgcactc
tacaattgggagtttgaggaatccgaggaggatcccgtcaccagcatcccctaccagcta
caaaggctctttgttctgctgcagaccagtaagaagcgggcgatagagacgactgatgta
actcggagcttcgggtgggatagcagtgaggcctggcagcagcatgacgtccaggaactg
tgcagggtcatgttcgatgccctggagcagaagtggaagcagacagaacaggctgatctg
atcaaccagctgtaccagggaaagctgaaggattatgtgcgttgtttagagtgtggatat
gaaagctggagaatcgacacttacctggacatccctcttgtgatcagaccctttggagcc
agtcaggcctacggaagtgtggaagaagctttgcaggcattcatccagccagaaaccttg
gacggccccaaccagtacttctgtgagcgctgcaaaaagaaatgtgatgcccgaaagggt
ctgaggtttctgcacttcccctacctactgacgctgcagctgaaaaggtttgattttgac
tacaccactatgcatcgcatcaagcttaacgaccgcatgactttcccagaggagctcgac
atgagcccgttcatcgatgtggaagacgagaaatcgcctcagacagagagctgcactgat
agcggagcagagaatgaaggcagttgccacagtgaccaaatgagcaatgatttttccact
gatgactgtgtggatgagggcatctgcttggacagcaccagtagcacagaaagggcattg
aagccaaagagcttgctgacctttgagttgttctccgtcatggtccattcgggcagcgct
gcgggtggacactactacgcctacatcaagtccttcagtgatggccagtggtacagtttc
aatgaccagcatgttagcaagatcacccaggatgatatcaggaagacatatggggggtcc
tcagggagcagaggctattattccagtgcctttgcaagttccacaaacgcttacatgctg
atttacagattgaaagacccctcaaggaattcaaggtttttatctgtggaagatttccca
gagcacataaagagtttggttcagaaggagaaggaatccgaagagcaagagaagcgccag
agagaaatcgaacgaaacacttgcaagatcaagctcttctgtgtgcatcctgtcaaaatg
atgatggagagcaagttggaggttcacaaagataaaattctcagagaagcaacagaaatg
gcctacaagctgatggagctggaaggagttgtccctctggactgctgtcgcctggtaaag
tatgatgagttccatgagtatctggagcggtcgtacgaaggcgaggaagacacccccatg
gggctcctgcttggaggcgtcaagtcctcgtacatgttcgatttgctcctcgagactcgc
cggcctgatcaggtcttccagccgtataaacctggagaggtgatggtgaaggtccacgtt
gttgatctgaagaccgagaccatcacccttccgatcagcgtgcgagcgtacctgaaccag
tctatcactgaattcaaacagcttatagcacaggctacaggtctgtctgcagaaacgatg
cgcgtggtcttggagcggtgctacaacgacctcaggctgctctacgtcccaaacaagacg
ctaaaagccgagggtttcttcaggagtaacaaggtttttgtggagagctcagagttgact
gatcatcaggttcctttcaccgactcgctcttgtggaaactgttggatcgccacgggaac
acgatccgcctgtttgtcttgctgcctgagcaatctcctggcaccctggccagcagaact
ctttgtcaaaaagcaggagaagactctgacggtcccttcgaagggtcgaagggcaacagg
aaatctgtggaggcgatactggaggagagcacggagaagttgaagaacctgtctcttcag
cagcagcagcagcagggctccagtgccagcgacagccagaaaagctccgacactagcgac
ttcgagcacatcgagtcgccgacgcaggaggcggactcgaactcatcgctgtgcgtggcg
gcagacagcagggagctggagaaccggatatccggctcctccgacacggagaaccagttt
gtttgcgaggagcgttcagactctgaggtgaacaatgaccgtagcacgagctcagtggac
agcgacatcctgagctccagccacagcagcgacacactgtgcaacgcggacagcggcccc
atccagctggccaacggcctggattcacacagcatcaccagcagccgacgctccaaagcc
cacgagggcaagaaggagacctgggacactgctgaggaagactctgggaccgacagcgag
tatgacgacaacgggaagagcaaggcagaagctcagtacctgtacttcagagcagagcct
tactctcaggatgatgcttcgtgggatacacacaaatgtttagtgcttcacgtggacaag
agaataacgttggctgccttcaagcagaacctggagccctacgtcggagtcccgtcgtcc
cagttcaaggtgtttcgagtttacgccaacaaccaggagtttgagagcgtacggctcaac
gaaacgctctcgtcgttctccgacgacaacaagataaccattcgactgggaagagcattg
aaaaagggtgaatacagagtcaaagtgttccagctgctcgtgaatgaaccagagccttgt
aagtttttagtggacacggtgtttgctaagggcatgactgtaagacagtccaaagaggag
ctgcttcctcagttaaaagagcagtgcaagctcgacctcagcatcgacagggttcgtctc
aggaaaaagacgtggaagaatccaggaacggtgtttctggattaccacgtttacgaggaa
gacatcagcatttcctcaaactgggaggttttcctggaagtcttggatgactcggagaag
atgaagtccatgtcgcagctggccattctgacccggaagtggaacccagctacgatgaac
ctgggacctttccaggaagcgattctggagagcagcagcgtggaagaactaaaggaaaag
ctcagtgaaatgagtggtattcccctggagaacttggaatttgcaaagggcaggggaacg
tttccatgtgatatatccgtgttggaaatccatcaggatttggactggaacccaaaagtt
tcgactctcaatgtgtggcctctgtacatctgtgacgatggagccgtggtcttctacagg
gacagcagagacgaacctctggagctgtcggaggacgagcgcaacgagctgatgaagaag
gaaagcagccgcctgctgaagacgggacaccgcgtcagctactcgccgcgcaaagagaag
gccctcaagatctacctggacggcggccccgtgagggacccggggcaggactga
DBGET
integrated database retrieval system
