Poecilia mexicana (shortfin molly): 106919712
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Entry
106919712 CDS
T08022
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
pmei
Poecilia mexicana (shortfin molly)
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmei04121
]
106919712
Ubiquitin system [BR:
pmei04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
106919712
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
zf-B_box
zf-C3HC4_2
zf-C3HC4_3
SPRY
zf-RING_2
U-box
zf-RING_5
zf-RING_10
zf-RING_6
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
106919712
NCBI-ProteinID:
XP_014845742
LinkDB
All DBs
Position
Unknown
AA seq
553 aa
AA seq
DB search
MEQNKLDRETFSCSICLDLLKDPVTIPCGHSYCMNCIKRHWNVEDLKSVYSCPQCRETFT
PRPALKKNIVFATVVEDLKKTGLQAAPADLCYAGPKDVVCDFCTGRKLKAIKSCLVCLAS
YCEKHLQSHYDSATFKQHHLVEPTKNLKKNICSKHDHVMKIFCRTDQKCICSFCLMDEHQ
GHDTVSASVEWTERQKDLKKRRGKIQQRIQDREDDVKLLQQEVEDINHSADKTVEDSEKI
FTELIRLLQKRSSDVKQQIRSQQETEVSQVKDVQEKLEQEITELKRKDAELKQLSKIEDH
NRFLRGYSSVSVFSESTHSSSINIHPLRYFEDIITSVSELQVELQDILRDPWRGSSLSLT
EVAVSLSEQEPKSRAGFLRHSCDLTLDPNTANSWLALSKGDRKVRRMGEPQFLSSHPERF
THWRQVLSRESLTGCCYWEVARKGRIYVAVTYNSIIRAGRSNKTLFGANDKSWALDCHSQ
HFKFGHNDIWKSISGPRSSRIGVFLDHRAGILSFYSVSDTMTLIHRVQTTFTEPLHAGLW
IGFGCQAELCEPK
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggagcagaataagctggaccgagaaactttctcctgttcgatctgtctggatctactg
aaggatccagtgacgattccctgtggacacagctactgtatgaactgtattaaaagacac
tggaatgtggaggatctgaagagcgtatacagctgccctcagtgcagggagacattcaca
ccaaggcctgctttgaagaaaaacattgtgtttgcaactgtagtggaggacctgaagaag
actggactccaagctgctcctgctgatctctgctatgctggacctaaagatgtggtctgt
gatttttgcactggaagaaaactgaaagccatcaagtcctgtttagtctgtctggcctct
tactgtgagaaacaccttcagtctcattatgattcagctacatttaagcaacaccacctg
gtggagcccaccaagaacctcaagaagaacatctgctctaagcatgatcatgtgatgaag
atattctgtcgcactgaccagaagtgtatctgcagtttctgtttaatggatgagcatcaa
ggtcatgacacagtgtcagcttcagtagaatggactgagaggcagaaagacctgaagaag
agacgaggaaaaatccagcagagaatccaggacagagaggatgatgtgaagctgcttcaa
caggaggtggaggacatcaatcactctgctgataaaacagtggaggacagtgagaagatc
ttcactgagctgatccgtctcctccagaaaagaagctctgatgtgaagcagcagatcaga
tcccagcaggaaactgaagtgagtcaagtcaaagatgttcaggagaagctggagcaggag
atcactgagctgaagaggaaagacgctgagctgaagcagctctcaaagatagaggatcac
aatcggtttctccgcggttacagctcagtgtcagtattcagtgagtctacacactcatcc
agcatcaacattcatcctctgagatactttgaggacatcatcacatctgtgtcggagctc
caagttgaactacaggacattctgagagacccgtggagaggaagctcactgagtctcact
gaggtggctgtttcactgtcagaacaagaaccaaaaagcagagctggattcttaagacat
tcatgtgacctcacactggatccaaacactgcaaattcatggctggcactatcaaaaggg
gacagaaaagtgagaaggatgggtgaacctcagtttctttctagtcacccagaaagattc
actcattggcgtcaggtcctgagtagagaaagtctgactggatgttgttactgggaagtg
gcgagaaaagggagaatttatgtagcagtcacatacaacagtataataagagcaggaaga
agtaataaaactttattcggagctaatgacaaatcatgggcattagattgtcactcacaa
cattttaaatttggtcacaacgacatctggaaatccatctcaggtcctcgttcctccaga
atcggagtgttcctcgatcacagagcaggtattctgtccttctacagcgtctctgacacc
atgacgctgatccacagagtccagaccacattcactgagccgctacatgctgggctttgg
attggttttggatgtcaagcagagctctgtgaacccaaatag
DBGET
integrated database retrieval system
