Poecilia mexicana (shortfin molly): 106919720
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Entry
106919720 CDS
T08022
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
pmei
Poecilia mexicana (shortfin molly)
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmei04121
]
106919720
Ubiquitin system [BR:
pmei04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
106919720
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-B_box
zf-RING_UBOX
SPRY
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
U-box
zf-RING_6
zf-RING_5
BshC
Gp58
Exonuc_VII_L
DASH_Dad4
Motif
Other DBs
NCBI-GeneID:
106919720
NCBI-ProteinID:
XP_014845749
LinkDB
All DBs
Position
Unknown
AA seq
552 aa
AA seq
DB search
MEQQAIQLDRETFSCSICLDILKDPVAIPCGHSYCMKCINDHWDQEDQKGIHSCPQCRKA
FTLRPDLEKNTMLAGLVEQLKKTGLQAAAADHRSAGPEHVACDFCTGRKLKAIKSCLVCL
VSYCEKHLQPHYEVAPLKKHKLVEPSKNLQENICSKHDEVMKMFCRTDQKSICSLCLLDE
HKGHDTVSAAAERTERQRELEERRGNIQQRIQDREKDVKQLQQEAEAINHSADKTVEDSE
EIFTKLIRLLQKRSSDVKQQIRSQQETEVSRIIDVQEKLEQEITELKRKDAELEKLSHSE
DHNQFLLNYPSLPALSESTHSIRPLRHFEDVTAAVSELREKLQDVLRDSWTNISLMVTGV
DVLLSEPEPKNRADFLKYSCEITLDPNTAHSYLLISEGDRKVTVMDEPQSYSSHPDRFTD
YCQVLSNESLTGRCYWEVAWRGSEIYVAVAYNNIKAGSGNECKFGGNDKSWALECSQNSF
KFGHNNIWTSISAPRSSRVGVYLDHEAGTLSFYSVSESMTLIHRVQTRFTEPLHAGVWIW
NIGNSAEFCKLK
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggagcagcaggcaattcagctggaccgagaaaccttctcctgttcgatctgcctggat
atactgaaggatccagtggctataccttgtggacacagctactgtatgaagtgtattaat
gatcactgggatcaagaggatcagaaaggaattcacagctgtccacagtgcagaaaagcc
tttacactgaggcctgacctggagaaaaacaccatgttagcaggtttagtggagcagctg
aagaagactggactccaagctgctgctgctgatcaccgctctgctggaccagaacatgtg
gcctgtgatttctgcactgggaggaaactgaaagccatcaagtcctgtttagtctgtctg
gtctcttactgtgagaaacaccttcagcctcattatgaagtggctcctttaaagaaacac
aagctggtggagccgtccaagaacctccaggagaacatctgctctaagcatgatgaggtg
atgaagatgttctgccgcactgatcagaagtctatctgtagtctctgtttactagatgaa
cataaaggccatgacacagtgtcagctgcagcagaaaggactgagaggcagagagagctg
gaggagagacgaggaaacatccagcagagaatccaggacagagagaaagatgtgaaacag
cttcaacaggaggcggaggccatcaatcactctgctgataaaacagtggaggacagtgag
gagatcttcaccaagctgatccgtctcctccagaaaagaagctctgatgtgaagcagcag
atcagatcccagcaggaaactgaagtgagtcgaatcatagatgttcaggagaagctggag
caggagatcactgagctgaagaggaaagacgctgagctggagaagctctcacactcagag
gatcacaaccagtttctcctcaactacccctcactgccagcactcagtgagtcgacacac
tccatccgtcctctgagacactttgaggacgtgacagcagctgtgtcagagctcagagag
aaactacaggacgtcctgagagactcatggacaaacatctcactgatggtcactggagtg
gatgttctactgtcagaaccagaaccaaagaacagagctgatttcctaaaatattcatgt
gaaatcactctggatccaaacaccgctcacagttatctgttaatatcagagggagacaga
aaagtgacagtgatggatgaacctcagtcttattccagtcatccagacagattcactgat
tactgtcaggttctgagtaacgagagcctgactggacgttgttactgggaggtggcgtgg
cgagggagtgaaatttacgtagcagtcgcatacaacaatatcaaagcaggaagtgggaat
gaatgtaaatttggaggtaatgacaaatcctgggctttggagtgttcccaaaacagtttt
aaatttggtcacaacaacatctggacctccatctcagctcctcgttcctccagagtcgga
gtgtacctggatcatgaagcaggtactctgtccttctacagcgtctctgaatccatgact
ctgatccacagagtccagaccagattcactgagccgcttcacgctggagtttggatttgg
aacattggaaactctgcagagttctgtaaactcaaatag
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