Poecilia mexicana (shortfin molly): 106919760
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Entry
106919760 CDS
T08022
Name
(RefSeq) nuclear receptor ROR-alpha
KO
K08532
RAR-related orphan receptor alpha
Organism
pmei
Poecilia mexicana (shortfin molly)
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmei03000
]
106919760
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pmei03310
]
106919760
Transcription factors [BR:
pmei03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
106919760
Nuclear receptors [BR:
pmei03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
106919760
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
106919760
NCBI-ProteinID:
XP_014845813
Ensembl:
ENSPMEG00000006359
UniProt:
A0A3B3YA04
LinkDB
All DBs
Position
Unknown
AA seq
468 aa
AA seq
DB search
MMYFVISAMKAQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNAAYSCPRQKNC
LIDRTSRNRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRLQQQQRDHQQQ
PGEAEPLTPSYGLSANGLTELHDDLSGYMDGHTPDGSKPDSAVSSFYLDIQPSPDQSGLD
INGIKPEPICDFAPGSGFFPYCSFTNGETSPTVSMAELEHLAQNISKSHMETCQYLREEL
QQMTWQAFLQEEVESYQSKPREVMWQLCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVL
LKAGSLEVVFVRMCRAFDSQNNTVYFDGKYAGPDVFKSLGCDDLISSVFEFGKNLCSMHL
SEDEIALFSAFVLMSADRSWLQEKVKVEKLQQKIQLALQHVLQKNHREDGILTKLICKVS
TLRALCSRHTEKLTAFKAIYPDIVRAHFPPLYKELFGSDFEQSMPVDG
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgatgtattttgtgatttcagctatgaaagctcaaatcgaaataattccctgcaagatc
tgtggagacaaatcatcaggcatccattacggcgtgataacatgcgaaggctgtaagggc
ttcttcaggaggagtcagcagagcaatgcagcgtactcctgcccccgtcagaaaaactgc
ttgatcgaccgcaccagccgcaaccgctgccagcactgcaggctgcagaagtgcctggca
gtgggaatgtcacgagatgcggtgaaatttggccgcatgtcaaagaagcagcgagacagc
ctgtacgctgaggtccagaagcaccggctgcagcagcagcagcgagaccaccaacagcag
cccggagaggcagagccgctcacacccagctacggcctctcagccaacggcctaacggag
ctacacgatgacctcagcggctacatggacggccacactcctgatggcagcaagcccgac
tcggcggtcagcagcttctacctagacatccagccgtcccctgaccagtcgggcttagac
atcaacggcatcaagccggagcccatctgcgactttgcccccggctctggcttctttccc
tactgctccttcaccaacggcgagacctcccccaccgtttccatggctgaactagagcac
ctcgcccagaacatctcaaagtcacacatggagacatgtcagtacctgagagaggagctg
cagcagatgacctggcaggctttccttcaggaagaggtggagagctaccagagcaagccc
cgggaagtcatgtggcagctgtgtgctatcaaaataacagaggccattcagtatgtggtg
gagtttgccaagcgcatcgacggcttcatggagctgtgtcagaacgatcagatagtgctg
ctgaaagcaggctctctggaagttgtgtttgtcagaatgtgccgtgcctttgactcgcaa
aacaacacagtctatttcgatggaaaatacgccggacctgatgtgttcaagtcattaggc
tgtgacgacttgatcagctccgtcttcgagtttgggaaaaacttgtgttctatgcacctg
tctgaggatgagatcgccctgttctctgcttttgtgttgatgtctgctgaccgatcctgg
cttcaggagaaggtgaaagtggaaaaactccagcagaagatccaactggcccttcaacat
gttctgcagaagaaccacagagaggatggcattcttacaaagttgatatgcaaagtgtcg
acactgcgagcgctgtgcagtaggcatacagagaagctcacggctttcaaagcaatatac
ccagacattgtgcgtgcccacttcccccccttatataaggagctgttcggatcagacttt
gagcagtccatgcccgtcgatgggtaa
DBGET
integrated database retrieval system