KEGG   Poecilia mexicana (shortfin molly): 106919760
Entry
106919760         CDS       T08022                                 
Name
(RefSeq) nuclear receptor ROR-alpha
  KO
K08532  RAR-related orphan receptor alpha
Organism
pmei  Poecilia mexicana (shortfin molly)
Brite
KEGG Orthology (KO) [BR:pmei00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pmei03000]
    106919760
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:pmei03310]
    106919760
Transcription factors [BR:pmei03000]
 Eukaryotic type
  Zinc finger
   Cys4 thyroid hormone receptor-like
    106919760
Nuclear receptors [BR:pmei03310]
 1. Thyroid hormone like
  1F. RAR-related orphan receptor
   106919760
SSDB
Motif
Pfam: zf-C4 Hormone_recep
Other DBs
NCBI-GeneID: 106919760
NCBI-ProteinID: XP_014845813
Ensembl: ENSPMEG00000006359
UniProt: A0A3B3YA04
LinkDB
Position
Unknown
AA seq 468 aa
MMYFVISAMKAQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNAAYSCPRQKNC
LIDRTSRNRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRLQQQQRDHQQQ
PGEAEPLTPSYGLSANGLTELHDDLSGYMDGHTPDGSKPDSAVSSFYLDIQPSPDQSGLD
INGIKPEPICDFAPGSGFFPYCSFTNGETSPTVSMAELEHLAQNISKSHMETCQYLREEL
QQMTWQAFLQEEVESYQSKPREVMWQLCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVL
LKAGSLEVVFVRMCRAFDSQNNTVYFDGKYAGPDVFKSLGCDDLISSVFEFGKNLCSMHL
SEDEIALFSAFVLMSADRSWLQEKVKVEKLQQKIQLALQHVLQKNHREDGILTKLICKVS
TLRALCSRHTEKLTAFKAIYPDIVRAHFPPLYKELFGSDFEQSMPVDG
NT seq 1407 nt   +upstreamnt  +downstreamnt
atgatgtattttgtgatttcagctatgaaagctcaaatcgaaataattccctgcaagatc
tgtggagacaaatcatcaggcatccattacggcgtgataacatgcgaaggctgtaagggc
ttcttcaggaggagtcagcagagcaatgcagcgtactcctgcccccgtcagaaaaactgc
ttgatcgaccgcaccagccgcaaccgctgccagcactgcaggctgcagaagtgcctggca
gtgggaatgtcacgagatgcggtgaaatttggccgcatgtcaaagaagcagcgagacagc
ctgtacgctgaggtccagaagcaccggctgcagcagcagcagcgagaccaccaacagcag
cccggagaggcagagccgctcacacccagctacggcctctcagccaacggcctaacggag
ctacacgatgacctcagcggctacatggacggccacactcctgatggcagcaagcccgac
tcggcggtcagcagcttctacctagacatccagccgtcccctgaccagtcgggcttagac
atcaacggcatcaagccggagcccatctgcgactttgcccccggctctggcttctttccc
tactgctccttcaccaacggcgagacctcccccaccgtttccatggctgaactagagcac
ctcgcccagaacatctcaaagtcacacatggagacatgtcagtacctgagagaggagctg
cagcagatgacctggcaggctttccttcaggaagaggtggagagctaccagagcaagccc
cgggaagtcatgtggcagctgtgtgctatcaaaataacagaggccattcagtatgtggtg
gagtttgccaagcgcatcgacggcttcatggagctgtgtcagaacgatcagatagtgctg
ctgaaagcaggctctctggaagttgtgtttgtcagaatgtgccgtgcctttgactcgcaa
aacaacacagtctatttcgatggaaaatacgccggacctgatgtgttcaagtcattaggc
tgtgacgacttgatcagctccgtcttcgagtttgggaaaaacttgtgttctatgcacctg
tctgaggatgagatcgccctgttctctgcttttgtgttgatgtctgctgaccgatcctgg
cttcaggagaaggtgaaagtggaaaaactccagcagaagatccaactggcccttcaacat
gttctgcagaagaaccacagagaggatggcattcttacaaagttgatatgcaaagtgtcg
acactgcgagcgctgtgcagtaggcatacagagaagctcacggctttcaaagcaatatac
ccagacattgtgcgtgcccacttcccccccttatataaggagctgttcggatcagacttt
gagcagtccatgcccgtcgatgggtaa

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