Poecilia mexicana (shortfin molly): 106921708
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Entry
106921708 CDS
T08022
Symbol
copb1
Name
(RefSeq) coatomer subunit beta
KO
K17301
coatomer subunit beta
Organism
pmei
Poecilia mexicana (shortfin molly)
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmei04131
]
106921708 (copb1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmei04147
]
106921708 (copb1)
Membrane trafficking [BR:
pmei04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
106921708 (copb1)
Exosome [BR:
pmei04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
106921708 (copb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Adaptin_N
Coatomer_b_Cpla
Coatamer_beta_C
HEAT
HEAT_2
Cnd1
HEAT_EZ
Arm
MMS19_N
AP4E_app_platf
Motif
Other DBs
NCBI-GeneID:
106921708
NCBI-ProteinID:
XP_014849043
Ensembl:
ENSPMEG00000004847
UniProt:
A0A3B3Y7G0
LinkDB
All DBs
Position
Unknown
AA seq
953 aa
AA seq
DB search
MTAAENVCYTLINVASDSEPPSEVSLKTDLEKGEIKAKTEALKKVIIMILNGEKLPGLLM
TIIRFVLPLQDHTIKKLLLVFWEIVPKTTPDGKLLQEMILVCDAYRKDLQHPNEFIRGST
LRFLCKLKESELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFEHLIPDAPELIHDF
LVNEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVHTFGDILQLVIVELIYKVCHANPS
ERARFIRCIYNLLQSSSPAVKYEAAGTLVTLSSAPTAIKAAAQCYIDLIIKESDNNVKLI
VLDRLIELKDHPTHERVLQDLVMDILRVLSTPDLEVRKKTLQLALDLVSSRNVEELVIVL
KKEVIKTNNVTEHEDTDKYRQLLVRTLHSCSVRFPDMAANVIPVLMEFLSDTNEAAAADV
LEFVREAIQRFDSLRPLIIEKMLEVFHAIKTVKIYRGALWILGEYCSTKEDIQSVMTEVR
RSLGEIPIVENEIKKETGELKPEDEVSAAPAQKLVTEMGTYVTQSALSSSRPSKKEEDRP
PLRGFLMDGDFFVAASLATTLTKLALRYVSIVQDKKKQNSFVAEAMLIMVTVLHLGKSSL
PKKPITDDDVDRISLCLKVLSECSPLMNDIFNKECRRSLSHMLTVRLEEEKLSQKKESEK
RNVTVQADDPISFMQLTAKNEMTSKEDQFQLSLLAAMGNTQRKEAADPLASKLNKVTQLT
GFSDPVYAEAYVHVNQYDIVLDVLVVNQTSDTLQNCTLELATLGDLKLVEKPSPLTLAPH
DFANIKANVKVASTENGIIFGNIVYDVSGAASDRNCVVLSDIHIDIMDYIQPASCTDAEF
RQMWAEFEWENKVTVNTNITDLNEYLQHILKSTNMKCLTPEKALSGFCGFMAANLYARSI
FGEDALANVSIEKPIHLGPDAPVTGHIRIRAKSQGMALSLGDKINLSQKKANI
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgacagctgcagaaaatgtttgttacactctgataaatgttgcctctgactcagagccc
ccttctgaagtcagcttaaaaacagatctagaaaagggcgagatcaaagcaaaaactgaa
gccctgaaaaaggttatcatcatgattctgaatggcgagaaattgccaggacttctgatg
accattattcgcttcgtgctgccacttcaagaccacaccataaaaaagctgctgctggtt
ttctgggagatcgttcccaaaacaactccagatggcaagctgctgcaggagatgatcctg
gtctgtgatgcctacaggaaggacctgcagcatcccaacgagttcatccgtggctccact
ctccgtttcctgtgcaagctgaaggaatctgagctgcttgagcctctgatgccggctatc
cgggcctgcctggagcaccgccacagctacgtccgccgaaacgctgtcctggccatctat
accatctataggaactttgaacatctcatcccagatgctccagagttgatccatgatttt
cttgtcaatgaaaaagatgccagctgtaagagaaatgccttcatgatgctgattcatgca
gatcaggatcgagctctggattacctcagcacatgtatcgatcaggttcatactttcggc
gacatcctgcagctggtcattgtggagctgatatacaaggtttgccatgctaatccatcg
gagcgcgcccgctttatccgttgcatctacaatctgctgcagtcttccagtccagctgtt
aagtatgaagctgctgggactcttgttactctctccagtgctcccacagccatcaaggct
gctgcgcagtgctacattgatttgatcatcaaggagagcgacaacaacgtcaagctgatt
gttctcgatcgtctgatcgaactgaaggaccatccgactcatgagcgcgtacttcaagac
ctagtgatggacatcctgcgcgtcctcagcacccccgacctggaagtcagaaagaagacc
ttgcagctggccctggacctcgtctcctctcgtaacgtggaggagttggtgattgttctg
aagaaggaggtgattaaaacaaacaatgtcacagaacatgaagacaccgataagtacaga
cagctgctggttcgcactctccactcatgcagcgtgcgcttccctgacatggcagctaat
gtcatacctgtgctgatggaattcctgagtgacactaatgaggcagctgctgctgatgtg
ctggagtttgtgagggaggccatccagaggtttgacagcttaagacctttgatcatcgag
aagatgctggaggtttttcatgccattaaaacagtcaagatttacaggggagcactttgg
attttaggagaatactgcagcactaaggaggacatccagagtgtgatgactgaagtacgc
aggtctcttggagagatcccaatagtggagaatgagattaaaaaagagacgggtgagttg
aaaccagaggacgaagtaagtgcagctccagctcagaagctggtgacggagatggggacc
tacgtgacacagagtgccctgagctcctccaggccttcgaagaaagaagaggacagacca
ccactccgaggattcctaatggatggagacttcttcgtggcggcttccttggccacaaca
ctcaccaaattggccctgcgttacgtttcaatcgttcaagacaaaaagaaacaaaattca
tttgtagctgaagccatgctgattatggtcacagtgctgcacctgggcaagtcctctctg
cccaagaagccaattacagatgatgatgtggaccgcatctcattgtgcctgaaggttctg
tcagagtgctcaccacttatgaatgacattttcaacaaggagtgccgcagatccctgtcg
catatgctcaccgtcaggctggaggaggagaagctgtcacagaagaaagaatccgagaaa
cgaaacgtgactgtgcaagcagacgacccgatctccttcatgcaactcacagccaaaaat
gagatgacctctaaggaggaccagtttcagctgagcttgctggctgctatgggtaacacc
cagaggaaggaggctgctgacccacttgcatcaaaactcaataaggtgacccagctgact
ggcttctcagacccagtgtacgctgaagcctatgtccatgttaaccagtatgacattgtg
ctggatgtgctggtggtcaaccaaacaagtgacactcttcagaactgcactcttgagttg
gccactttaggggatctgaagttggttgaaaaaccttcccctctaactctggcccctcat
gattttgcaaacataaaggctaatgtcaaggtagcttctaccgagaatgggattatattt
ggcaacatcgtctatgatgtgtccggagctgctagcgacagaaactgtgttgtcctcagc
gacattcatattgacatcatggattacatccagccagcctcctgcacagatgcagagttc
agacagatgtgggcagagtttgaatgggaaaacaaggtgacggtaaacaccaacatcact
gatctgaatgaatatcttcagcatatccttaagtccactaacatgaagtgtttgactcct
gaaaaggcactctctggtttctgtggcttcatggccgccaacctgtatgctcgctccatc
tttggggaagatgccctggctaacgtcagcatcgagaagcccattcacctggggcccgac
gcacctgtcaccggacacatacgcattagggccaaaagtcagggaatggcactgagcctc
ggtgataagatcaacctctctcaaaagaaagctaatatctga
DBGET
integrated database retrieval system
