Poecilia mexicana (shortfin molly): 106929375
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Entry
106929375 CDS
T08022
Symbol
ddx3x
Name
(RefSeq) ATP-dependent RNA helicase DDX3X isoform X1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
pmei
Poecilia mexicana (shortfin molly)
Pathway
pmei04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
106929375 (ddx3x)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmei03019
]
106929375 (ddx3x)
03041 Spliceosome [BR:
pmei03041
]
106929375 (ddx3x)
03036 Chromosome and associated proteins [BR:
pmei03036
]
106929375 (ddx3x)
Enzymes [BR:
pmei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106929375 (ddx3x)
Messenger RNA biogenesis [BR:
pmei03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
106929375 (ddx3x)
mRNA cycle factors
Common to processing body (P body) and stress granule
106929375 (ddx3x)
Spliceosome [BR:
pmei03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
106929375 (ddx3x)
Chromosome and associated proteins [BR:
pmei03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
106929375 (ddx3x)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UTP25
Motif
Other DBs
NCBI-GeneID:
106929375
NCBI-ProteinID:
XP_014861763
Ensembl:
ENSPMEG00000014025
LinkDB
All DBs
Position
Unknown
AA seq
776 aa
AA seq
DB search
MSHVVVDNPHGLDQQLAALDLNPDGQGGGTGRRYIPPHLRNKDAAKTAGNSYSTGKQCGY
SVAPVNFYAPKQCPQPWQADCQPVQGASCPTGWDDCTMGYPRLASQELAFYHAYSGGWRN
RCDSPGWDGGRTNGFVNGFHDNRTNGGFGGRGPPRNDRGGRGAYRGNRGGGSFNQPLQNT
GFGGYENKDGGWGGAPRDAAYNSFGGRNDRSKSAFFNDRGSGSRGRYERGGFGGGGNSRW
VEESRGEDDWSKPTAPNERLEHELFSGSNTGINFEKYDDIPVEATGTNCPPHIESFHDVD
MGEIIMGNINLTRYTRPTPVQKHAIPIIKIKRDLMACAQTGSGKTAAFLLPVLSQIYTDG
PGDTLQASKNSGQENGRYGRRKQYPISLVLAPTRELALQIYDEARKFAYRSHVRPCVVYG
GADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDHCNYLVLDEADRMLDMGFEPQIR
RIVEQDTMPPKGIRQTMMFSATFPKEIQILARDFLEDYIFLAVGRVGSTSENITQKVVWV
EENDKRSFLLDLLNATGKDSLTLVFVETKKGADALEDFLYREGYACTSIHGDRSQRDREE
ALHQFRSGRCPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLAT
SFFNDKNSNITKDLLDILVEAKQEVPSWLESLAYEHQHKSTNRGRSKSRFSGGFGARDYR
QASGGSGGFNSNRSGRNAGGHGGNRGFGGGGFGGNFYSDGYGGNYNHSGSVDWWGN
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatgtggtcgttgataatccacacggtctagatcagcagcttgctgccctagac
ttgaaccctgacggtcaaggcggaggaactggcagacgctacattccacctcacttgagg
aacaaagatgctgcaaaaaccgcaggaaattcttattccactggtaaacagtgcggttat
tcagtggcaccagtaaatttctatgcccctaagcagtgcccccaaccatggcaggctgat
tgccagccagtgcagggagctagctgtcctacaggatgggatgactgtaccatgggttac
ccaagactggcctctcaagagcttgccttttaccatgcctacagtggcggctggcgaaac
cgatgcgattcacctgggtgggacggaggacgcaccaacggatttgtgaatggtttccat
gacaaccgtacaaatgggggtttcggagggcgcggaccccctcgcaatgacagaggtggg
cgtggcgcctaccgtggtaacaggggcggaggctcgtttaatcaaccattgcaaaataca
gggtttggaggctacgaaaacaaagacggaggctggggaggagcccctagagacgccgcc
tacaacagctttggaggacgcaacgatcggtccaagtctgcgttcttcaacgaccgtggg
tctggctccagaggaagatacgagcgtggggggttcggtggtggtgggaacagccgctgg
gtggaggagtccagaggagaagatgactggtccaagcctactgcacccaatgagcgtctg
gaacacgagcttttctctggaagcaacacggggataaactttgagaaatacgacgatatt
cccgtggaggcgactggaacgaactgcccaccacacatcgagagttttcatgatgtggac
atgggggagatcatcatggggaacatcaacctgacccgctacacccggcccactccggtc
cagaagcacgccattcccatcattaagattaagagagacctgatggcctgcgcccagacg
ggttctggtaaaaccgctgctttcctgttgccggttctgagtcagatctacacagacggg
ccaggagatactctgcaggcctcaaagaacagtggacaggagaatggacggtacggccgt
cgtaagcagtaccccatctccctcgttctggctccaaccagagaactggctctgcagatc
tacgatgaggccaggaagttcgcctaccgctcccacgtgcgtccctgtgtggtgtacggc
ggcgccgacatcggccaacagatccgggacctggaaagaggctgccatctactggtggcc
acaccgggacgtttggtggacatgatggagagaggcaagatcggtctggaccattgcaac
tacctggttctggacgaggctgaccgcatgttggacatgggctttgagccgcagatcaga
cgcatcgtggagcaggacacgatgccgcccaagggcatccgccagaccatgatgttcagc
gccaccttccccaaagagattcagatccttgctcgtgacttcctggaggactacatcttc
ctggcagtggggcgcgttggttccacatcagagaacatcacgcagaaggttgtctgggta
gaagagaacgacaagaggtctttccttctggatctgctcaatgccacaggtaaagactcc
ctgactctggtgtttgtggaaacaaagaaaggagccgacgctctggaagacttcctgtac
cgcgagggctacgcctgcaccagcatccatggagacagatctcagagggacagagaggaa
gctctgcaccagttccgctctggacgctgcccaatcctggtggctacagctgtggctgct
cgaggtctggacatcagcaacgtgaagcacgtgattaacttcgatctgcccagcgacatt
gaggagtacgttcaccgtatcggccgtacgggacgtgtgggcaaccttggtctggccacg
tcgttctttaacgacaaaaacagcaacataaccaaagatttgctggacatcctggttgag
gccaagcaggaggttccttcctggctggagagcctggcctacgagcaccagcacaagagc
accaaccgcggacgttccaagagcaggttctctggtggtttcggagccagagactaccgc
caggcatcgggtggctccggaggcttcaacagcaaccgctcaggacgcaatgctggcggt
cacggaggaaaccgtggctttggtggaggtggcttcggcggaaacttctacagcgacggc
tacggcggaaattacaaccactctggtagcgtagattggtgggggaactaa
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integrated database retrieval system
