Poecilia mexicana (shortfin molly): 106930006
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Entry
106930006 CDS
T08022
Symbol
usp13
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13 isoform X1
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
pmei
Poecilia mexicana (shortfin molly)
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pmei01002
]
106930006 (usp13)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmei04121
]
106930006 (usp13)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmei04147
]
106930006 (usp13)
Enzymes [BR:
pmei01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
106930006 (usp13)
Peptidases and inhibitors [BR:
pmei01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
106930006 (usp13)
Ubiquitin system [BR:
pmei04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
106930006 (usp13)
Exosome [BR:
pmei04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
106930006 (usp13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP_var
UBA
zf-UBP
UCH_1
UBA_4
Motif
Other DBs
NCBI-GeneID:
106930006
NCBI-ProteinID:
XP_014862783
Ensembl:
ENSPMEG00000012456
UniProt:
A0A3B3X5Z4
LinkDB
All DBs
Position
Unknown
AA seq
863 aa
AA seq
DB search
MAADLGELLVPFMPTIRVPKTGDRVYKSECAFSFDSPESEGGLYVCMNTFLGFGREHVER
HYRKTGQSVYMHLKRHVKEKTTGAAGGAIPRRRNGKVFLDLELNRDFNGEDYEYEDEAKL
VIFPDHFEIPLPNIEELPALVTIACDAVLNAPSAYKKQEPESWDEEIQVSRHARSLRQLD
NGVRIPPSGWKCQKCEMRENLWLNLTDGSVLCGKWFFDGSGGNGHALEHYRETSYPLAVK
LDTITPDGADVYSFEEEEAVLDPHMSEHLSHFGIDMLQMQRRTENGHHTDNNPRPRVSEW
EVIQESGMKLKAVFGSGYTGIKNLGNSCYLSTVLQVLFSIPDFQRMYVGNLQRIFDYSPL
DPTQDFATQMAKLGHGLLSGQYSKPPMKSELIEQVMKEEHKVLNGHQQRGISPRMLKALV
SRGHPEFSSNRQQDAHEFFLHLINLVERNSAGSENPSDSFRFLVEERVQCCQSRRVRYAQ
RVDYCIQLPAPIEAATNREELLAYEAKRKEAEENTRAPPEPVRARIPFTACLQAFTEPEN
VPDFWSSALQAKSAGVKTSRFASFPEYLVVQIKKFTFGVDWVPKKLDLAIDVPDFLDLSR
LRATGLQAGEEELPDLMPPIVLPEDTRDNSMSSTDSPEIDEGAVMQLAEMGFPLEACRKA
VYYTGNMGPEMAFNWIIAHMEEPDFAEPLTLPSMMDPLPSTSDSPMGATPLDNLPPEESI
AILTSMGFPRNHSIRALKATNNNLERALDWIFTHPEEEESDGLSDMADTEPNDNSFSNMN
SHSDSTLSPDRETSSPRVKDGPGRYELFAIISHMGASTMSGHYVCHIKKEGRWVIYNDHK
VCLSERPPKDLGYIYFYRRLSSS
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagacctgggagagctgctagtccccttcatgcccaccatcagagtccccaaa
acaggagacagagtctacaaaagcgagtgcgccttctccttcgactcccccgagtctgag
ggaggcctgtatgtgtgtatgaacacattcctgggcttcggacgggaacatgtggagaga
cattatcgcaaaacaggacagagtgtttacatgcacctcaaacgacatgttaaagagaaa
accacaggtgctgccggaggagccatccccaggcgaagaaatggaaaagtgtttctagat
ttagagctaaaccgagattttaacggagaggactacgagtatgaggatgaggcaaagctc
gtcatttttccagaccacttcgagatccctttaccaaatattgaggagctgcccgctctg
gtgaccatagcctgtgatgcagtacttaacgcaccttcagcttacaagaaacaggagcct
gagtcttgggacgaggagatccaggtgtcaagacatgccagaagcctcagacagctggat
aacggcgtccggatcccacccagtggctggaagtgtcagaaatgcgagatgagagagaac
ctgtggctgaacctgactgatggatcggttctttgtgggaagtggttttttgatgggagc
ggggggaacggccacgctctggagcactacagagagaccagctacccactggctgttaaa
ctggacaccatcactccagatggagcagatgtttattcgtttgaggaggaagaggctgtt
ttggacccccacatgtcagagcacttgtcacactttgggatagacatgctccagatgcag
aggagaacagaaaatggacaccacacagacaataacccccgaccgcgagtcagtgagtgg
gaagtgatccaagagtcgggcatgaagctgaaggcggtgtttggttctggttacactggc
atcaaaaacctgggaaacagctgctacctcagcacagtgctacaggtcctgttcagcatc
ccagatttccaaaggatgtatgtaggtaaccttcagaggatattcgactattcacccctt
gaccccacccaggatttcgccacacagatggctaaactgggacacgggctcctctcaggc
cagtactccaaaccacccatgaaatctgagctcattgaacaggtgatgaaagaagaacac
aaggtattaaacgggcaccaacagaggggaatctctccccgaatgctcaaggcactggtc
agcagggggcacccagagttttcctccaacagacaacaagatgcccatgagttcttcctg
caccttatcaacttggtagaaagaaacagtgctggttcagagaatccaagcgactcgttt
cgtttcttggtggaggagagagttcagtgctgtcagagtcggcgggttcgttacgctcag
cgggtcgactactgcatccagctaccggctcccatagaagcagcgacgaatagagaggag
ttgcttgcatatgaggccaagcggaaagaagctgaggagaacacgcgggctcctcctgaa
ccggtgcgagcacggatccctttcacagcctgccttcaggcctttacggagcctgaaaac
gtccccgatttctggagttcagcgttgcaggccaagtcagctggagtcaaaacttcccgc
ttcgcctcgttcccagagtatcttgttgtgcagatcaagaaattcaccttcggtgttgac
tgggtgccaaagaagcttgacctggccatcgatgttccagacttcttggacctgagccgg
ctccgagccacggggctgcaggcgggcgaagaggagctgccggatctcatgcctcccatt
gttttaccggaagacaccagagataactccatgagctcaactgactctccggagatagat
gaaggcgccgttatgcagctggcagagatgggttttccgctggaggcctgcaggaaggcg
gtgtactacacaggaaacatgggcccagagatggccttcaactggatcatagcccacatg
gaggagcctgactttgctgagcctctcactttgccctcaatgatggatcctcttccctct
accagtgacagccccatgggggcaacgccactggacaacctgcctcccgaggagagcatc
gccatcctcacctcgatgggctttcctcgcaatcacagcatccgcgctctcaaagccacg
aataataatcttgagcgagcgctcgactggatcttcacccacccagaagaggaggagagc
gacgggctctctgacatggcggacacggagcccaacgacaactccttttccaacatgaac
tcgcacagtgactccacgctgtccccagacagagaaacgtcaagcccgagagtcaaagat
ggaccgggacgatatgagctgtttgccatcatcagccacatgggagcctccacgatgtct
ggacattatgtttgtcacatcaaaaaagagggaaggtgggtgatctacaacgaccacaag
gtgtgtttgtcagaaaggcctccgaaggacttgggctacatctacttttaccgtcgcctc
tcgagcagttaa
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integrated database retrieval system
