Poecilia mexicana (shortfin molly): 106932724
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Entry
106932724 CDS
T08022
Name
(RefSeq) tripartite motif-containing protein 16-like isoform X1
KO
K12006
tripartite motif-containing protein 16
Organism
pmei
Poecilia mexicana (shortfin molly)
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmei04121
]
106932724
Ubiquitin system [BR:
pmei04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
106932724
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-B_box
zf-RING_UBOX
SPRY
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
zf-ANAPC11
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
106932724
NCBI-ProteinID:
XP_014867043
LinkDB
All DBs
Position
Unknown
AA seq
651 aa
AA seq
DB search
MAQQGYPMDSVKFSCSICLDLLKTPVTIPCGHNYCMYCIGSFWDDEDKKGIHSCPQCRQQ
FTPRPVLVKNTMLAELVEDVRKTGPQPAPDDDSLVGPEDVACDICTVRKMKAIKSCLVCL
VSYCENHLQPHYDIPGLKKHKLVNPSKTLQDNICSHHDEVMKIFCRTDQQCICYLCLMAE
HKGHETVPAAAERADKKKELQESRQQIHQRIQDQEKDVKLLQQEVETINVSADKAVEDSE
KIFTEMIRLLQERSSEVKQQIRSQQETEVSRVKDVQEKLEQEITELKRKDAELEQLSHTE
DHTQFLLNYPSLPALRESTHSSSINIRPLRHFEDVTAAVTELKTKVLDILRDPPKTSSAS
KAAVLPQPMAVSSQPSEPKTREDFLKYSRKLTLSRNTAHKFLELSEGNRKVTMTNENQYY
EDHEDRFTRRWQVLSKQRLTGRCYWEVEWTQGRSIEVAVAYDNIERTGDTKESTFGLNEN
SWALCCQPNSYKYYGVDVDDDDDNDGYNDCYNDDYNDGYNGRYNDGYNGGYNDRYNDGYN
GGYDGYDDGYNGGYNDRYDGYNGCYDGYDDGYNGCYNDRYDDAVVIPVTNPYSSRVGVYL
DHRAGILSFYSVYGSQMTLIHKAETTFTQPLHAGIWLSRSKGTSAEFIQLK
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atggcacagcaaggatatccgatggattctgtaaaattctcctgctcgatttgtttggat
ctactgaaaaccccagtgaccatcccgtgtggacacaactactgcatgtactgtattgga
agtttttgggatgatgaagacaagaaaggaatccacagctgccctcagtgcaggcagcag
ttcacaccgaggcctgttctggtgaaaaacaccatgttagcagagttggtggaggatgtg
aggaagactggaccacaaccggctcctgatgatgactcccttgtgggacctgaagatgtg
gcctgtgacatctgcaccgtgaggaagatgaaagctatcaagtcctgtctggtctgcttg
gtttcttattgtgagaatcaccttcaacctcactatgacatccctggactgaagaagcac
aagctggtgaatccgtccaagactctccaggacaacatctgctctcatcatgatgaggtg
atgaagatcttctgtcgtactgatcagcagtgtatctgttatctctgcttaatggccgaa
cataaaggccatgaaacagtcccagctgcagcagaaagggctgataaaaagaaggagctc
caggagagtcgacaacaaatccatcagagaatccaggaccaagagaaagatgtgaagctg
cttcaacaggaggtggaaaccatcaatgtctctgctgataaagcagtggaggacagtgag
aagatcttcactgagatgatccgtctcctccaggaaagaagctctgaagtgaagcagcag
atcagatcccagcaggaaactgaagtgagtcgagtcaaagatgttcaggagaagctggag
caggagatcactgagctgaagaggaaagacgctgagctggagcagctctcacacacagag
gatcacacccagtttctcctcaactacccctcactgccagcactcagggagtcgacacac
tcatccagcatcaacatccgtcctctgagacactttgaggacgtgacagcagctgtgaca
gagctcaaaactaaagtcttggacatcctgagagatccaccaaaaacaagttcagcctcc
aaagcggctgttttaccacaaccaatggctgtttcatcacaaccatctgaaccaaagacc
agggaggacttcttaaagtattcaaggaagctcacactgagtagaaacacagcacacaaa
tttctggagttatctgaaggcaacagaaaagtaacgatgacaaatgaaaaccaatattat
gaagatcacgaagacagattcactagaagatggcaggtactgagtaaacaacgtctgact
ggacgctgttattgggaggtagagtggacacaagggagatcaattgaagtagccgtggct
tatgataacatagaaagaacaggggacacaaaagagagtacttttggcttgaatgagaac
tcttgggcgttgtgttgccagccaaattcttataaatattatggtgttgatgttgatgat
gatgacgataatgacggttataatgactgttataatgacgattataatgacggttataat
ggccgttataatgacggttataatggcggttataatgaccgttataatgacggttataat
ggcggttatgacggttatgacgacggttataatggcggttataatgaccgttatgacggt
tataatggctgttatgacggttatgatgacggttataatggctgttataatgaccgttat
gatgatgctgtggttattcctgtcacaaacccctattcctccagagtaggagtgtacctt
gatcacagagcaggcattctgtctttctacagcgtctatggatctcagatgactctcatc
cacaaagcagagaccacattcactcagcctctacatgctgggatttggctttcacgttca
aaaggaaccagtgcagagttcattcagttaaaataa
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