Poecilia mexicana (shortfin molly): 106933504
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Entry
106933504 CDS
T08022
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like
KO
K12006
tripartite motif-containing protein 16
Organism
pmei
Poecilia mexicana (shortfin molly)
Brite
KEGG Orthology (KO) [BR:
pmei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmei04121
]
106933504
Ubiquitin system [BR:
pmei04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
106933504
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
SPRY
zf-B_box
zf-C3HC4_2
PRY
zf-C3HC4_3
U-box
zf-RING_2
Fib_alpha
zf-RING_6
BshC
YkyA
zf-RING_5
Vps53_N
DUF5685
BBIP10
RasGEF
VPS38
Motif
Other DBs
NCBI-GeneID:
106933504
NCBI-ProteinID:
XP_014868268
Ensembl:
ENSPMEG00000009113
LinkDB
All DBs
Position
Unknown
AA seq
561 aa
AA seq
DB search
MAGKEEDLQDNQCGVNLDREQFCCSVCLDLLKEPVTIPCGHSYCRSCIESCWDRQGEREE
YGCPQCRETFHPRPVLKRNNMLAEVVKNLKMMRYPQPPPPSLTLPAPPDVACDFCSLGRN
KATKSCLTCLASYCDEHVEPHYTVPVLQKHELISATMPVGDKVCTEHRKLMDLCCQTDEQ
LICTECTVDKHKGHTFVSILELKETTKERLEKVRKQVQEKVQQREEELETIIQAEKNVKS
SAQTSKADCAKAFSELISSVQNRRSKLEQLIEAQEKSALAQAGELKQRLEKELGELRGRD
AQLLRLSSSDDVVYLAQRNSISVAFQDFAPGAGPPRSFTDVTACVTELKAKADILLNETW
PKISATVSYVDFSLPPAPNSREEFLRYWRPLTLDDTSNYPNLNLVDSCKMRPSPIPYPPH
PNRFTKFPQVLCKEALTERSYWEVEWHARTLSVAVAYADANRTSDESEFGRNDKSWTLEC
SGDTLKFRHNDVDMKVPGSCSKKIGVFLDYQAGILSFYQVSDQMLQIFEVQTVFTEPLHP
GIGLNYEWYDTGVFAQLAILK
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggctggtaaggaggaagatctgcaggacaatcagtgcggagtcaatctggaccgtgag
cagttctgctgctcggtttgtctggatctgctgaaggagcccgtcaccatcccctgcgga
cacagttactgccgaagctgcatcgagagctgctgggacaggcagggtgagagggaggaa
tacggctgcccccagtgcagggagaccttccatcccaggcctgtcctaaagagaaacaac
atgctggctgaggtggtgaagaacctgaagatgatgagatatccccaaccaccgcctccg
tctctgaccctgcccgccccgcctgacgtcgcctgcgacttttgcagtctcggacgaaac
aaagccaccaagtcttgcttgacgtgcttggcgtcttactgcgacgaacatgtagagcct
cactacactgtccccgtgttgcagaagcatgaactgatctcagctacgatgccagtaggg
gacaaggtgtgcaccgagcatcggaagttgatggatctctgctgccagacggacgaacag
ctcatctgcaccgagtgcacagtggacaaacataaaggtcacacgtttgtgtctattttg
gagttaaaggagacaacaaaggaacggctggagaaagttcgaaagcaagtgcaagagaaa
gtccagcaaagagaagaagagctggagacgatcatacaggcagagaagaatgttaagagc
agtgcccaaacctcaaaggcagactgtgccaaggcgttctctgagctgatctcgtccgtg
cagaacagacgcagtaagctggagcagctgatcgaagcccaggagaagagcgccctggct
caggccggggagctgaagcagcgcctggagaaggagctcggtgagctgagagggagggac
gctcaactgctgcggctttcaagcagcgatgacgttgtctacctggcgcagcgtaactcc
atttccgttgcatttcaagactttgcgccgggtgccggtcctccacgttctttcacagat
gtgactgcctgtgtgactgagctgaaagctaaagcagacattttgctgaacgagacatgg
cccaagatctcagctacggtctcttacgttgacttctccttaccgcctgcacccaacagc
agagaggagtttttacgttattggcgtccccttacattggatgacacgtcaaactaccct
aacctgaacctggtggacagctgtaaaatgaggccttcacccatcccctatcctcctcat
ccgaacagattcacaaagttcccacaggttctctgcaaagaggctttaacagagcggagt
tactgggaggtggagtggcacgctcgcaccctctctgtggctgtagcttacgcagacgcc
aaccgaacatcggacgagtcagagtttgggagaaacgacaagtcctggactctagaatgc
tcaggagacaccctgaagtttcgacacaatgatgttgatatgaaagtaccaggctcttgc
tccaaaaagattggcgtgttcctggattaccaagcaggaattctgagtttttatcaggtt
tctgaccagatgctgcaaatctttgaagtccagaccgtgttcactgagcctcttcatcct
ggtattggtttgaactatgagtggtacgatactggagtatttgcacagctggccatattg
aaatag
DBGET
integrated database retrieval system
