KEGG   Paramacrobiotus metropolitanus: 129585685
Entry
129585685         CDS       T09028                                 
Name
(RefSeq) DNA ligase 1-like
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
pmeo  Paramacrobiotus metropolitanus
Pathway
pmeo03030  DNA replication
pmeo03410  Base excision repair
pmeo03420  Nucleotide excision repair
pmeo03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pmeo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    129585685
   03410 Base excision repair
    129585685
   03420 Nucleotide excision repair
    129585685
   03430 Mismatch repair
    129585685
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pmeo03032]
    129585685
   03400 DNA repair and recombination proteins [BR:pmeo03400]
    129585685
Enzymes [BR:pmeo01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     129585685
    6.5.1.6  DNA ligase (ATP or NAD+)
     129585685
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     129585685
DNA replication proteins [BR:pmeo03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    129585685
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     129585685
DNA repair and recombination proteins [BR:pmeo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     129585685
   NER (nucleotide excision repair)
    Other NER factors
     129585685
   MMR (mismatch excision repair)
    Other MMR factors
     129585685
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase
Other DBs
NCBI-GeneID: 129585685
NCBI-ProteinID: XP_055334441
LinkDB
Position
Unknown
AA seq 722 aa
MRSFLSRAVITVCAPQPFVGYFWKNCSLLVENRSCRFTMAQTSITSFFTKSSDAAKKSPL
KPGDKSEANAGKTSATSDNRESQYDPSAESYDPLTDACWQKGEKTPYIALAKTFDTIEKI
SSRLTIIRTMRNFFRSVILLSPDDLVRCLYLSLNKIAPSWEGLELGVGDSIVMKAIADAT
GKTVPELKKLKEQEGDLGSAAALSRNTQRTLVASKKLTIENVFQKFREISKISGNASQKR
KIQHITSMLVAGKPVEAKFIVRACKGGMRIGLAEKSALIALAHAALMVEQDDGKKKAKDD
NIKKAEETIKNAFNEYPDYDFLVSALLRGGLDEVQRVCRIRAGIPVKPMLAHPSKGIDLV
MARLGDLEFVVEYKYDGERLQVHKQDTAKITMFSRNQEDHTQKFPELVARIPTHLKAGVE
SFVLDSEVVAWDLVEKKILPFQVLSTRKRKNVGEAKDVTVQVCVYAFDLLYFNGESLIST
PLRRRQELLRENFIVTPGEFMLAQSLVSSDPEALQIFMQEAIQNSCEGLMVKALDKPYEI
SKRSNNWLKLKKDYLDTIGDTVDVTVIGAFFGSGKRAGTFGSYICAVYDPDRNEYQTLCK
LATGLSDENLETFTKFFQDKVISKPLHTYRQKIKPDVWFEPVQVWEIKGADLSVSPVHTA
GIGRADPEKGISLRFPRFIKIRNDKQPEDSTTGDEIFGLYRDQAARQEKSKEEAVASDDD
DE
NT seq 2169 nt   +upstreamnt  +downstreamnt
atgcgttcgtttttgtcacgagcggtaattaccgtatgtgcgccacagccttttgttgga
tatttctggaaaaactgttcgctgttggtcgaaaacaggagttgtagattcaccatggcg
cagacttcaattacgtcatttttcacaaaatcttccgatgctgccaagaaatccccatta
aaaccaggagataaatcggaggctaatgctggcaaaacatctgcaacgtctgataatcgg
gagagccagtatgatcccagtgcggaatcttatgatcccttgactgatgcctgctggcag
aaaggagagaaaacaccatatatcgctcttgccaagacgtttgacaccattgaaaagata
tcttcgcgtttgacaattatacggaccatgcggaatttttttcgttcggttatattgttg
agtccggatgatttagtgcgatgcctgtacttgagtttaaataaaatcgctccatcgtgg
gaaggactggaattgggggtgggagacagcatagtcatgaaggcgattgccgatgctaca
gggaaaaccgtgccagaacttaagaaattgaaagaacaagaaggggatcttgggtctgcg
gctgcactttctcggaatacacagcgaacgctggtggcctcgaaaaaactcactatagag
aacgttttccaaaagtttcgggaaatcagcaaaatatcagggaatgcgtctcaaaaaagg
aaaatccagcacatcacgagtatgcttgtggccggaaagccagttgaagcgaagtttatt
gtgcgggcttgtaagggaggcatgcgtattggtctagcagagaaatccgctttgatagcc
ctggcacatgctgcccttatggtggaacaagatgatggaaagaaaaaagccaaggatgat
aacatcaaaaaagctgaagaaaccataaaaaatgcatttaatgaatatccggattatgat
tttcttgtgtctgctcttttgcgcgggggtttggatgaagttcagcgggtttgccggata
agagcaggaatacccgtgaagccgatgttagctcatccttcgaaagggatcgatctcgtt
atggctcgattgggtgatttggaattcgtggttgaatataaatatgatggagagcgctta
caggtgcacaaacaggacacagcaaaaatcaccatgttcagtcgtaatcaggaagaccac
acacaaaaattcccggaacttgtcgctagaattcccacccatttaaaagctggtgtggaa
tctttcgttctggatagtgaagtggtggcgtgggatttggttgaaaagaaaatcctccct
tttcaagttcttagtacgcggaaacgtaagaacgttggggaagcaaaagatgtgaccgtc
caggtttgcgtgtacgcttttgatctgctgtatttcaacggtgaatcattgatctccact
cctctgcgccgcagacaagaacttctacgtgaaaatttcatcgtaacacctggagaattc
atgctagcccagagtttggtatccagcgatccggaggcattgcagatatttatgcaggaa
gcaattcagaacagctgtgaaggccttatggttaaagcactggataaaccatatgaaatt
tcgaaaaggtccaacaattggctaaagttgaaaaaggattatctggataccattggagac
actgtcgatgttaccgttattggtgcattttttggctcgggaaaacgggctgggacattt
ggatcgtatatttgtgctgtttacgatcccgatcgcaatgagtaccagactttatgcaag
cttgccaccggattgtcagacgaaaacttggaaacgtttaccaaatttttccaagacaaa
gtaatatcgaaaccactgcacacctatcgccagaaaattaaacctgatgtatggtttgaa
cccgtgcaagtatgggagattaagggtgccgatttgtccgtttctccagtacatactgca
ggcattggccgagccgatccagagaaaggaatatctctccgctttccgcgtttcataaag
atacgcaatgataagcaacccgaagacagcaccactggcgatgaaatttttggattatac
cgggatcaagcggcgcggcaagaaaagagcaaagaagaggctgtggcttctgatgatgat
gatgaataa

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