Paramacrobiotus metropolitanus: 129591681
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Entry
129591681 CDS
T09028
Name
(RefSeq) uncharacterized protein LOC129591681
KO
K12878
THO complex subunit 1
Organism
pmeo
Paramacrobiotus metropolitanus
Pathway
pmeo03013
Nucleocytoplasmic transport
pmeo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmeo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129591681
09122 Translation
03013 Nucleocytoplasmic transport
129591681
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmeo03019
]
129591681
03041 Spliceosome [BR:
pmeo03041
]
129591681
Messenger RNA biogenesis [BR:
pmeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
129591681
Spliceosome [BR:
pmeo03041
]
Complex C
Other components
EJC/TREX
129591681
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
129591681
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Death
Motif
Other DBs
NCBI-GeneID:
129591681
NCBI-ProteinID:
XP_055343402
LinkDB
All DBs
Position
Unknown
AA seq
699 aa
AA seq
DB search
MNSAPQELYGLAGVSHYMTRIVLLCKPQNLSSPLSSDKISTLENGIAQFITEFSAISGSI
RETHKTYLETAIRGCFWDELNQTRNFLDMEWLMRCTVDFVDADILDPAVPFMLFQEACDW
GDSREKEQIANLFVDLKNKWRSPKFVSSSCKNMLLRFAVELLSRLPKTTSGKARGRLLCY
VSARIPMSDKGAANIAGEFNTGKCVTTEGLTTGTANNPHANAKFAQLCNLLDCLKNPNLV
LTDKGFATFKQGMETVLEMMTPTDLKEGEQEEGEVEDGRSRILTRASRTNAATGSVDVNL
NSIRFNPDPNALESDMKQDRVKRNLLCRFLFVAQYICLPSRPKGPVEPTEDQLVWCDKKV
QTALEILSRTNPDGPLYVQRLLDHLDSEATVSIWKDNQCPTLQTAPKADLSSLSPYPPRD
KLPYPKVSRVQFGKEKLVNRKSIRDMPLAGPGKVTGSVEVTRLLNKGPNTMEEFQNLGYQ
PPDLSYFAPVVEQAITKETPKIVNDEKFQWRALRILGKRTHIHFSNEAAVEKMPTKDMGT
FLENYVMQLAEKNPDLQSIKQTYLAATATSPVEMSPNNAEENGNVDMAADNLDDLINPVP
DEDLPAEEEPEPAGHQIMNKESILGIAKLIGADWERFAGILQFDPDSISYWKSSSDDPVQ
QAALMLQVYMEQHSQPDSDSNDALEKLLGVLKDEYAIVL
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgaattctgccccacaggaactgtatggtctcgctggcgtctcgcactacatgacgcgc
atcgtcctcctctgcaagccacaaaatctgtctagcccactctcctccgataagatctcc
acgctagaaaatggcattgcacaatttattacggaattttccgcgatttcgggtagtata
cgagaaactcataaaacctatctggaaacggccatccgtggatgcttttgggatgaatta
aatcagacgcgcaatttcttggacatggaatggttgatgcgctgtactgtcgattttgtg
gatgcggacatcctggatccagcggttcccttcatgctgtttcaggaagcctgcgattgg
ggtgatagccgggagaaggaacagattgcgaatttatttgtcgatctgaaaaataaatgg
cgatctccgaaattcgtcagctcatcctgcaaaaatatgttactgcgctttgccgtggaa
ttgttgtctcgccttcccaaaaccacgtccggcaaggctcggggacgtttactgtgttat
gttagcgcacggattccaatgtcggataaaggagctgctaacattgccggggaattcaat
accggaaaatgcgtaactaccgagggcctgacaacgggaacggcgaataacccccacgcc
aatgcgaaatttgctcagctttgcaatttattggattgcctgaaaaatcccaacctggtc
ttaactgataaaggattcgctacgttcaaacaaggaatggaaactgttcttgagatgatg
acgccaaccgatcttaaagaaggagaacaggaagagggagaagtggaagatggacgcagt
agaattttaactcgagcatcgcggacaaatgctgccaccggcagcgttgatgttaacctg
aacagtatcagattcaatcccgatccgaatgccttggaaagcgatatgaaacaggatcgc
gtgaagcggaatctgctatgtcggttcctgtttgtggcacagtacatctgcctgccatca
agaccaaaagggccggttgagcctacggaagatcagttggtatggtgcgataaaaaagtg
cagactgcacttgaaattttatctcgcactaacccggatggtccactctatgtgcagaga
ttattggaccatttggacagcgaagcgacagtgtctatctggaaggataaccagtgcccg
acgctacaaactgcacccaaggctgatttatccagcctctcaccgtatcctccacgcgac
aagctcccgtatccgaaagtcagccgtgtacagtttggcaaagagaaactggtgaacagg
aagtcaatacgggatatgcctttggccggtccgggtaaagtgactggcagtgtggaagtc
acgcgcttattgaataaaggcccaaatacaatggaagagttccagaatttgggataccag
ccgccagacttgagttattttgccccggttgtggaacaggcgataacgaaagagacacca
aagattgttaatgatgaaaagttccagtggcgggctttacgaattttgggtaaacgaacg
catattcacttctccaatgaagcggccgtggagaaaatgccgaccaaagatatgggaaca
ttcctcgagaattatgtcatgcagttagccgagaagaatcccgatctgcaaagtataaag
cagacatacttggcagccactgccacctcacccgttgaaatgtcgccgaataatgctgag
gaaaacggaaatgtggacatggctgcggataacctggacgatctcattaatcctgttccc
gatgaggatttaccggcggaggaagaacccgaaccagctggtcatcaaataatgaataaa
gagagcatactgggcatagcgaaattgatcggagctgactgggagcgatttgctgggata
ctgcagtttgatccggattcaatctcttactggaagtcatccagtgatgatcccgtgcag
caggctgcgctgatgctgcaggtttacatggaacagcattctcaacctgacagtgattcg
aatgatgcactggaaaagctgttaggggttctgaaagatgagtatgccatcgttttgtag
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