Paramacrobiotus metropolitanus: 129591708
Help
Entry
129591708 CDS
T09028
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
pmeo
Paramacrobiotus metropolitanus
Pathway
pmeo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmeo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129591708
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmeo03041
]
129591708
Enzymes [BR:
pmeo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129591708
Spliceosome [BR:
pmeo03041
]
Complex A
U2 snRNP components
U2 related factors
129591708
Complex B
129591708
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
129591708
NCBI-ProteinID:
XP_055343438
LinkDB
All DBs
Position
Unknown
AA seq
1014 aa
AA seq
DB search
MPRLVSSTSLRDSRREDRLREERNGRYDDRRRRSRSRDRYNNYPYNDRNRRRSRSRSPYS
RRRRSRSRSAEAQPAVVPVAATVDSTPLTFGDTFDKEAEVKRLEQEYQKRKERIELWRKQ
KKREDDKAAAAAAVEAAKQNSANGPGWSLEDEGEDAEEPLADVKAKPVEDEVDPLDAFMQ
GVQEEVKEIRKRDLENMQDAPGKKKSAARNEAASGVTFVNTVANKNKNDHKSKRGEIMEQ
DQDALEWSSEEEEEDLKTTMSNVQNKQKKLIQAVDHQAIDYPTFRRSFYNEVPEITNMSE
VEVQAYREELEDIKVRGKDCPKPIKNWAQCGVSKKELDVLKKSGYTKPTPIQAQAVPCIM
SGRDVIGIAKTGSGKTLAFLLPMFRHVLDQPHLEEGEGPVALILTPTRELALQIWKEAKK
FGKSMGLRCVCVYGGTGISEQIAELKKGAEIIVCTPGRMIDMLAANNGRVTNLRRVTYVV
LDEADRMFDMGFEPQVMLIVDNIRPDRQTVLFSATFPRQMEALARRILAKPIEIQVGGRS
VVCKDVEQHVMIIDEDQKFLKVLELLGHYGAQGSCLIFVEKQEKADQLLKDLMKASYSAM
ALHGGIDQFDRDSTINDFKKGNIQVLVATSVAARGLDVKNLVLVVNYDCPNHYEDYVHRC
GRTGRAGNKGYAYTFITPLQERYSPDILKALELSGAEVPQDLKLIFETYKGRLAAEGKKV
KGFSGFGGKGFQFDENEAQAAKDSKKMQKAVLGLQDSDSDEGEADLDQHIEDLFKSTRRV
KDANAPAPPVVIVQQQPAVTVQQGAAAPVQPQETYTGHGAFIPVAAPVYKVSKDAGKNLE
LAKRLAMKLQAAKAVDPTKNSTQQAAEAIMRGFHSEAPAVSKKTIAEQLAEKLNAKLNYV
PEEKPAEENPVEQYKTFEEELEINDFPQQARWRITGKETLAQIGEYADAFLSVRGSYIPT
GKEPTEGERKLYIGIEATTELSLSKAKAEVTRIIKEELLKIANAPVNRGRYKVV
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atgccccgacttgtctcctcaacttctttacgtgatagccggcgagaggatcgtctacgc
gaagagcggaatggacgttacgatgatcggcgacggcgcagtcggtcgcgggaccgctac
aacaactatccatacaacgatcgcaaccgacgtcgttcgcgctcgcgttctccttattcc
cgacggcgacgcagccgctctcgttccgcggaagcccaacccgccgtcgtccccgtcgcg
gccacagttgacagtacaccgttgacattcggcgacacatttgacaaggaagccgaagtg
aaacgcctggaacaggaataccagaagcgtaaagaacggattgagctgtggagaaagcag
aagaaacgcgaggatgataaagcagcggcggctgctgctgtggaggcggccaaacagaat
tccgccaacggacctggctggtcgctggaggatgaaggggaagatgcggaggagccgttg
gctgatgtcaaagccaaacccgtggaagacgaagtggatcccttggatgcgtttatgcag
ggtgtgcaggaagaagtcaaggagatccgcaagcgggacttggagaatatgcaggatgca
ccagggaagaaaaagtcagcggcacgcaacgaagccgcgagcggcgtgacgttcgtcaat
acggtggccaataaaaataagaatgatcataaaagcaaacggggcgaaattatggagcag
gatcaggatgcgttggaatggagctccgaagaggaggaagaggatttgaagacaacgatg
agtaatgtacagaataaacagaagaagctgattcaagcggtggatcatcaagccattgat
tatccaacttttcgaaggagtttctataatgaagttccggaaatcacgaacatgtcggag
gtggaggtacaggcgtatcgggaagagctggaggatatcaaagtacggggaaaggattgt
cccaaacccattaagaattgggcgcagtgtggtgttagtaagaaagaattggatgtactg
aaaaagagcggctacacgaaacctactcccatccaagcgcaggccgttccctgcatcatg
tccggacgtgatgtgattgggattgcaaaaaccggttccgggaagacgttagcgtttttg
ttgcccatgtttcgtcatgtgctggatcagcctcatttggaagaaggagaagggcccgtg
gcgttgattctgacaccgactcgtgaattagcgctgcagatttggaaggaagcgaagaaa
tttgggaagtccatggggctgcgctgtgtgtgcgtgtacggaggaaccggcatatcggag
cagatcgcagaattgaaaaaaggagcggagatcattgtttgcactcctggtcggatgatt
gacatgctggctgctaataatggacgagtaacgaaccttcgaagagtgacatatgtcgtt
ctggatgaggctgatcgcatgttcgacatgggattcgaaccccaggtgatgttgattgtg
gataatattcgaccggatcggcagacggtgttgttttctgccacatttccccgacagatg
gaggcgttggcgcgccgaatcctcgcaaaaccaatcgaaattcaagttggtggacgcagc
gtcgtgtgcaaagacgtcgaacaacacgtgatgatcattgacgaagatcagaaatttttg
aaagtgttggaattgctgggtcattatggtgcgcaaggaagctgtttgatcttcgtggaa
aagcaggaaaaagctgatcaacttctgaaagatcttatgaaagcttcatattccgcaatg
gccctgcatggtggtattgaccagtttgaccgcgacagtaccattaatgatttcaaaaaa
ggcaatattcaagtgctggtggccacctcagtggccgcacgtggtcttgatgtcaagaat
ttggtgctggtggtcaattatgattgcccaaatcactacgaagattacgtgcaccggtgc
ggccgaaccgggcgtgcggggaataaaggatatgcgtacacgtttattacgccgttgcag
gaacgttactctccggatatccttaaagcactagaattgtctggtgctgaagttcctcag
gatctcaaactcatttttgaaacgtacaagggcagattggcggctgaagggaaaaaagtt
aagggctttagtggatttggtgggaagggatttcagttcgatgagaacgaagcgcaggct
gcgaaagattcgaagaaaatgcagaaagctgttcttggattacaggattcggattctgat
gaaggagaagccgacttggatcaacacattgaggatttattcaagagtacgcgacgcgtt
aaggacgctaatgctccggctcctccggttgtcatcgtgcagcaacaacccgcagttaca
gtgcagcaaggtgcagctgcaccggttcaaccgcaggaaacatacaccggccacggagcg
ttcattcctgtggcagcaccagtgtataaagtatcgaaagatgccggaaaaaatttggaa
ctggcgaagcgcttggccatgaaattgcaggcagccaaagcggttgatccgaccaagaat
tccacacagcaggccgcggaagcgattatgcgcgggttccactcggaagcgccggccgtg
tccaagaagaccattgccgaacaattagcagagaaactgaatgctaaactgaactatgtt
ccggaggagaagccagcggaggagaatccagttgaacagtataagacgtttgaagaggaa
ctggaaatcaatgatttcccgcagcaggcgcgctggaggataaccggaaaggagacactc
gcgcagattggtgaatatgccgatgctttcctgtcggtacgcggttcgtacattcccacc
ggcaaagaaccgacggaaggcgagaggaagttgtatattggtatcgaagccaccacggag
ctgtcgttgtccaaagcgaaggcggaggtgaccaggattattaaggaagaacttctgaag
attgccaatgcgccggttaaccgtggtcgttataaagtggtttaa
DBGET
integrated database retrieval system
