Paramacrobiotus metropolitanus: 129592583
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Entry
129592583 CDS
T09028
Name
(RefSeq) uncharacterized protein LOC129592583
KO
K14326
regulator of nonsense transcripts 1 [EC:
5.6.2.5
5.6.2.3
]
Organism
pmeo
Paramacrobiotus metropolitanus
Pathway
pmeo03013
Nucleocytoplasmic transport
pmeo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmeo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129592583
03015 mRNA surveillance pathway
129592583
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmeo03019
]
129592583
Enzymes [BR:
pmeo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
129592583
5.6.2.5 RNA 5'-3' helicase
129592583
Messenger RNA biogenesis [BR:
pmeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
129592583
mRNA cycle factors
Common to processing body (P body) and stress granule
129592583
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
UPF1_Zn_bind
AAA_30
AAA_19
Viral_helicase1
DEAD
PhoH
nSTAND3
ResIII
UvrD_C_2
SLFN-g3_helicase
Helicase_RecD
UvrD-helicase
AAA
AAA_22
AAA_16
Motif
Other DBs
NCBI-GeneID:
129592583
NCBI-ProteinID:
XP_055344625
LinkDB
All DBs
Position
Unknown
AA seq
965 aa
AA seq
DB search
MPEVEVVPAAAAAVKTEKIPTRKIYCAYCGLTEQRFLAYCGAENCQKWFCNGTRDGLNKS
HIVAHCGKSKHTSVMVFRGIPAGTSKRKSQSVDFIVKNCTYQPKCAKCNSNNIFDLGTED
TADPYNPARTWCRKHAVVEGKVGKNQWNTLVAAHKEDEKAQQPEEVFFIRLPYWLMPVVP
KASMKDNREWSLKMWGLEKLEREVDILEEFWRWKPEGTKDEFLDWKTAVDNFVVTRRVDF
SDRQEYAAYWDSLVMELSRQEKGTVESLPPMRNLEIKWMSAYDIEVKVPQGIFTEFLEIG
RPMEVSWMILKDGEEYSMWQRDATISALRQLDTGHVVVVHCLSAVNPSHHRVSRELRFRM
VYNDVNYWRMNQALYKLEHDPSCVSQQVLDMLLGRVVMTQELLHEWRSNFASTALEAAEW
ESDGEEDEKTVAEALPRTMNGSLGKFVPPPFHTEYVDAGNEFRSYNFDQMILPRLNRRLN
ERQRLAVDMALKAPVCLIQGPPGTGKTETAAAIVVNFTKDPMGKILVCAPSNVAIDHLTL
KIAKISKDMNILRLFAHTRDVECLAEGVRKYTVFSKFKKERPREAITEAALRVYEKECVR
KAKIVCCTCNSAGLMSLDRVAFPYVLIDEAAQGMEPECLIAITRACEKLVLIGDPAQLGA
VVRFPNLQKSQLTTSLFQRLWKVCPWMILTQQYRMHPAISKMISQITYEDQLVNDQCVLA
RTSASILLNDIFGMIVPLPDLVRYHELLFAPDGMIYAREGIIPMLFVSLARNDELSGSGT
SFVNMAEAHFIARLVANILHEGHVFSIPGLEKPHPEEIGIITFYNGQRPQLEIELKCHPR
INQRFKDIEINSVDGFQGREKDIIILSCVRSADSYRGRRTLGFTDDPQRLNVAMSRARKA
LIVVGSWHIFYHSDMWRRYFRYIPVIQAETVCHLLPLPCSTKPPCKICPDDQGLRIQQAM
VNMGH
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgccggaagtggaggttgtgcccgcggcggcggcggcggtgaagacggaaaaaattcct
acacggaaaatttattgcgcgtactgcggcttaaccgagcaacgattcctggcctactgc
ggtgcggagaactgccagaagtggttctgcaacggtactcgtgatggtctgaataaaagc
catatcgttgcccattgtgggaagtccaagcacacgtcggtgatggtgttccgcgggatc
ccagcgggaacctccaagcgcaaaagccaatccgtggactttatcgtcaaaaactgcacc
taccagccgaaatgcgccaaatgcaactccaacaacatcttcgatctgggcacggaggat
accgccgacccgtacaatcccgcacgcacctggtgccgcaaacacgccgtggtggagggg
aaagtggggaagaatcagtggaatacgctggtggcggcgcacaaggaggacgagaaggcg
cagcagccggaagaggtcttcttcatccggttgccgtactggttgatgcctgtcgtgccc
aaggccagcatgaaggacaaccgggagtggtcgctgaaaatgtggggtctggaaaagcta
gagagggaggtggatattctggaggagttttggcgctggaagccggaagggaccaaagat
gaatttctggactggaagacggccgtggataattttgtcgtgacgcggagggttgacttt
tcggaccggcaggagtacgccgcgtactgggacagtctggttatggaactctctcgccag
gagaaaggcaccgtggaatccctgccgccgatgcgcaacctggaaatcaaatggatgagc
gcctacgatatcgaagtgaaagtcccgcagggtatcttcacggaattcctggagatcggg
cgtcccatggaagtttcctggatgatcctgaaggacggcgaagagtactccatgtggcag
cgcgacgccaccatttcggccctccgccaactggataccgggcatgtcgtcgtagtgcac
tgcctgtcggccgtcaatcccagtcatcatcgtgtcagccgtgaactgcgcttccgcatg
gtgtataatgatgtgaattattggcggatgaaccaggcgctgtacaaactggaacacgat
cccagctgcgtctcccaacaggtgctggacatgctgttgggccgcgtggtgatgacacag
gaactgctgcatgaatggcgctccaatttcgcttccacggcgttggaagcggcggaatgg
gagagtgatggggaagaggacgaaaaaaccgttgctgaggccctgccgcgcacgatgaac
gggagtctgggcaagttcgtccccccgcccttccacaccgagtacgtggatgccgggaat
gagtttcgcagctacaactttgaccagatgattttgccgcggctgaatcgccggctgaac
gagcgccagcggctggcggtggatatggcgctgaaggcgcccgtgtgcttaatccaaggc
ccaccgggtaccgggaagacagaaacagcggcggccattgtggtcaattttaccaaggat
cccatggggaagattttggtatgtgcgcccagtaacgtggccattgatcatctgacgctg
aagattgccaagatcagtaaagatatgaatattttacgattatttgcgcatacccgcgat
gtggagtgcctggcggaaggggtacgcaagtacacggtgtttagcaagttcaaaaaggag
cgtccacgggaagccattacggaggcggcgttgcgggtttatgagaaggagtgtgttaga
aaggcgaagattgtgtgctgcacgtgcaatagtgccggactgatgagtttggatcgcgtt
gcttttccctacgtgttgatcgacgaagccgcacaaggaatggagccggagtgcttgatt
gccatcacccgggcatgcgaaaagttggtgttgatcggcgatccagcacagttgggcgcc
gttgtccgctttcccaatctgcagaaatcccagctgaccacctcgctgttccagcgcctg
tggaaggtgtgtccgtggatgatcctgacccagcagtatcgcatgcacccggctatctcc
aaaatgatctcgcagatcacctacgaagaccaactggttaatgaccaatgcgtcctggct
cgtacatccgcatcgatcctgctgaacgacatcttcgggatgattgtgccactgccggat
ctggtccgctaccatgaactgctcttcgcacccgacgggatgatctacgcacgggagggc
atcattcccatgttgtttgtcagtttggcgcgcaatgacgagctgtccggcagtgggacg
tcgtttgtcaatatggcggaagcgcacttcattgcccgcctggtggccaatattctgcac
gagggccatgtcttctccatcccgggcctggagaagccccacccggaagagattggcatt
attaccttctataacggacagcggccgcagctggaaatcgagctcaaatgtcacccgcgt
atcaaccagcgcttcaaggatatcgagattaacagtgtggatgggttccaaggccgcgag
aaggacatcattattttatcgtgtgttcgctccgccgactcataccgcggccggcgcacc
cttggcttcaccgacgacccgcagcgcctgaacgtggccatgtcgcgcgcgcgcaaggcc
ctgatcgtcgtgggcagttggcacatcttctatcattccgacatgtggcgtcgctacttc
cgctacattcccgtcatccaggcggagaccgtgtgccatctgctaccgctgccctgcagc
accaaaccgccctgcaagatctgcccggatgatcaggggctgcgcatccagcaggccatg
gtcaatatgggacactag
DBGET
integrated database retrieval system
