Paramacrobiotus metropolitanus: 129597629
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Entry
129597629 CDS
T09028
Name
(RefSeq) general transcription factor IIH subunit 4-like
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
pmeo
Paramacrobiotus metropolitanus
Pathway
pmeo03022
Basal transcription factors
pmeo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pmeo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
129597629
09124 Replication and repair
03420 Nucleotide excision repair
129597629
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmeo03021
]
129597629
03400 DNA repair and recombination proteins [BR:
pmeo03400
]
129597629
Transcription machinery [BR:
pmeo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
129597629
DNA repair and recombination proteins [BR:
pmeo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
129597629
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
129597629
NCBI-ProteinID:
XP_055351235
LinkDB
All DBs
Position
Unknown
AA seq
456 aa
AA seq
DB search
MASPAETASDKCKNLYAYLKSLPGSLLDSLYKHPCPCMAVFRDLPPMAQKFVLRQLFIEH
VLPKSTVLSWVTPEGKKDHDDALKVLTELKIWTEAPLPSGSMGWKLSDDFREGIQAVVVG
GRTSWSGDDKPTEEEAVPRDAKFLEAYAQERWETVLHFLAGLGSSKVSLDTCEVLTNAGL
LKKPDSSREGDITHDGFRFLLMDTPTQIWNFILAYLQSVQKWNMNLVECIAFIFQLSFSQ
IGKHYSSNGLSQNQLRTLQHFREYGLVYMRSKKSARFYPTNLVVNLSVGAARSTGAFSEG
YLVVETNYRVYAYTDSPLKIAVVSYFSEMMYRFPNLSMGMITRESIRAALAKGISADEII
KFLRMHAHPQMRENNPILPATLTDQIKLWEMERERVEFSEGTMYSQFNSLNDFERLRDYA
KDLGVVMFTNNEKRVIIVSPEGHEQVKAFWKRQKNA
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggctagcccagctgagactgccagcgataagtgtaagaacttgtatgcctatctcaaa
tccctcccgggcagcttattggatagcttgtacaagcatccctgtccgtgcatggcggta
tttcgggatttgccgccgatggcgcagaagtttgtgctgcggcagctctttatcgaacat
gttctgccgaaatccaccgtgttgtcctgggtgactcccgaaggaaagaaggaccacgat
gatgcactgaaagtcttgacggaattgaaaatctggacagaagcccctttaccatcgggc
tctatgggatggaagctgagcgatgattttcgcgaaggtattcaggctgttgtcgttggt
ggacgaacgtcgtggagcggagacgataaacccacggaagaagaagccgtgccacgggat
gccaagtttttggaagcatacgcacaggagagatgggagaccgttctacatttccttgct
ggactgggatccagcaaagtttcccttgacacttgcgaagtgctcacaaatgcgggattg
ttaaagaagccggactcgtcacgggaaggagacattacgcacgacggcttccgtttctta
ttaatggacactccaacacagatttggaattttatcctggcttaccttcagtcggttcag
aaatggaacatgaatctagtggagtgtattgcatttatcttccagctgagtttctcacaa
attgggaagcattattcctctaatggtctttcgcaaaaccagttgcgtacattgcaacat
ttccgagagtatggattggtttatatgcgcagtaaaaaatctgcgagattttatcctaca
aatctagttgtgaatctgagcgtgggagcagcgcgcagcaccggtgcttttagtgaaggc
tatttggttgtggaaacaaattatcgggtttatgcttatacggattcacctctaaagatc
gcggttgtgagctatttttcagaaatgatgtacagattcccgaatctttcaatgggaatg
ataactcgagaaagtattcgagcggccctggcgaaaggaatttccgcggatgaaattata
aagtttcttcgcatgcacgcccacccgcagatgcgtgagaataatcccatcctgccggcc
acgctcacagaccagatcaaactgtgggaaatggaacgtgaacgcgtggagttctcggaa
ggaacaatgtacagccagttcaacagtctaaacgatttcgagcgcctgcgggattacgct
aaagacctaggcgtagtgatgttcaccaataatgaaaaacgcgtgattattgtgtcgcct
gaagggcacgaacaggtgaaagctttctggaagcggcaaaaaaatgcctaa
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