Paramacrobiotus metropolitanus: 129599919
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Entry
129599919 CDS
T09028
Name
(RefSeq) general transcription factor IIH subunit 2-like
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
pmeo
Paramacrobiotus metropolitanus
Pathway
pmeo03022
Basal transcription factors
pmeo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pmeo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
129599919
09124 Replication and repair
03420 Nucleotide excision repair
129599919
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmeo03021
]
129599919
03400 DNA repair and recombination proteins [BR:
pmeo03400
]
129599919
Transcription machinery [BR:
pmeo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
129599919
DNA repair and recombination proteins [BR:
pmeo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
129599919
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
VWA
OrfB_Zn_ribbon
Motif
Other DBs
NCBI-GeneID:
129599919
NCBI-ProteinID:
XP_055354256
LinkDB
All DBs
Position
Unknown
AA seq
399 aa
AA seq
DB search
MADPGLDDADAQGYRWETEYERTWEVLQEDATGSLTASVQDVVLGMKRRRLLEKKPNLRL
GMMRHVFVIMDMSDSMKDQDFKPNRAFCVIKLLEYFVGEFFDQNPIGQIGFITTKNKRAE
RMTELSGNAKKHLAALNLLRTNDLSGEPSLQNSLELAAETLRNIPSHASREIIVVMGSLT
SCDPGNIFDTARMLRECNIRCSVIGLSAEVSICRNLAKDTVGEYSVALDESHLKDVMMAQ
VFPPPVSANSDSFLIKMGFPQQKAHERLDEYSFCICHLDQLNSSLYGKPGYFCPVCISKY
CELPVECKVCGLTLVSAPHLARSYHHLFPVEAFQELSSEQLRAFTSRTCFGCMAKNEEEK
SHWFQCKSCKNIFCIDCDLFVHETLHSCPGCASSPVKPE
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggccgacccaggactggacgatgcagatgctcagggatatcgatgggaaacagaatac
gagcgaacatgggaagtcctacaagaagatgccacgggatcgttgacagccagcgtacag
gatgtggttctgggcatgaagcgtcgacggctgctcgagaaaaaacccaatttgcgtttg
ggcatgatgcgacatgtcttcgttatcatggacatgtcggattctatgaaagatcaagac
ttcaaaccgaatcgagcattctgtgtgataaagttactggagtactttgtgggtgaattt
ttcgatcaaaatccgattggacaaattggattcattactactaagaacaaacgtgcagag
cgaatgacggaactcagtggtaatgccaaaaaacacctggcagctttaaatttattacgt
acaaatgatctgtctggcgagccatccctccaaaattccttggaactggcagctgagacc
ttgcgtaacattccgagccatgcaagtagagagatcatcgtcgtcatgggcagtttgact
tcctgtgaccccggaaatattttcgatactgcgcgaatgcttcgagagtgcaacattcga
tgctcggtgatcggtctatccgcagaagtttcaatttgtcgaaatctggcgaaagacact
gtaggagaatacagcgttgctttggatgaatcgcatttaaaagatgttatgatggcacaa
gtatttccccctcctgttagtgcgaactctgactcgttccttataaagatgggatttcct
cagcagaaagctcatgagcgtttggatgaatactcattttgcatatgccatctggaccag
ttgaattcgtcactatatgggaaacctggatacttttgtccagtgtgcattagtaaatat
tgtgaattaccagtcgaatgcaaggtttgtgggctaaccttggtgtcagcaccacatctg
gcccgctcttaccaccacctttttcctgtggaagcttttcaggaattatcttcagaacaa
ttacgtgccttcacctcaagaacatgcttcggatgtatggccaaaaatgaagaggagaaa
tctcattggtttcaatgcaaaagttgcaagaatattttctgtattgattgtgatttattt
gtccatgaaacactgcatagttgtcctggctgtgctagtagcccggtaaagccggaatag
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