Parabacteroides merdae: INE87_00190
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Entry
INE87_00190 CDS
T07751
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
pmer
Parabacteroides merdae
Pathway
pmer00521
Streptomycin biosynthesis
pmer00523
Polyketide sugar unit biosynthesis
pmer00541
O-Antigen nucleotide sugar biosynthesis
pmer01100
Metabolic pathways
pmer01110
Biosynthesis of secondary metabolites
pmer01250
Biosynthesis of nucleotide sugars
Module
pmer_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
pmer00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
INE87_00190 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
INE87_00190 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
INE87_00190 (rfbC)
Enzymes [BR:
pmer01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
INE87_00190 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QUT47771
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Position
207604..208257
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AA seq
217 aa
AA seq
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MQIFFSLFVFGEVWRSKEKEVTLSSISINNKIMTYIETEIPGVWIIEPKVFKDARGYFME
AWKKAEFEEHIGKVEFVQDNESCSSKGVLRGLHYQLAPYSQSKLVRVIKGCVLDVAVDLR
KGSPTFGKYVAVELSDENKRQFFIPQGFAHGFHVMSEEAVFTYKVDNPYAPTHERGLRFD
DPTVGVDWKITEPAILNLSDKDRNAALLQDAEINFEF
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatctttttctctctttttgttttcggggaggtttggagaagtaaggaaaaagag
gttactttgtcatctattagcataaacaataagataatgacatatattgaaactgaaatc
cccggtgtgtggatcattgaaccgaaagtgtttaaagatgcacgcggttactttatggag
gcttggaagaaggcggagtttgaagaacatatcggcaaagtggaatttgtgcaggataac
gagtcttgttcatcaaaaggcgtgttgagaggattgcattaccagttggctccttactcg
cagtccaagttggtacgcgtgataaaaggatgtgttttggatgtggccgtcgatttgcgt
aaaggttctccgacattcgggaaatatgtagcagtcgagttgtccgatgagaataaacgt
caattttttatcccacagggattcgcccacggttttcatgtcatgagcgaggaagcggtt
tttacttataaagtcgataacccttatgcacctacacatgagcgcggattgcgttttgac
gatccgacggtcggggtggactggaagatcacggaaccggctatcctcaatttgtcggat
aaagataggaatgctgctttactgcaagacgctgagataaattttgagttttga
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