KEGG   Parabacteroides merdae: INE87_02406
Entry
INE87_02406       CDS       T07751                                 
Symbol
gyrB_2
Name
(GenBank) DNA gyrase subunit B
  KO
K02622  topoisomerase IV subunit B [EC:5.6.2.2]
Organism
pmer  Parabacteroides merdae
Brite
KEGG Orthology (KO) [BR:pmer00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pmer03032]
    INE87_02406 (gyrB_2)
   03036 Chromosome and associated proteins [BR:pmer03036]
    INE87_02406 (gyrB_2)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pmer02048]
    INE87_02406 (gyrB_2)
Enzymes [BR:pmer01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     INE87_02406 (gyrB_2)
DNA replication proteins [BR:pmer03032]
 Prokaryotic type
  DNA Topoisomerases
   INE87_02406 (gyrB_2)
Chromosome and associated proteins [BR:pmer03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    INE87_02406 (gyrB_2)
Prokaryotic defense system [BR:pmer02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    INE87_02406 (gyrB_2)
SSDB
Motif
Pfam: DNA_gyraseB Toprim HATPase_c DNA_gyraseB_C HATPase_c_3
Other DBs
NCBI-ProteinID: QUT49918
LinkDB
Position
2855241..2857085
AA seq 614 aa
MQQPTAYNDDDIKTLDWMEHIRRRPGMYIGKLGDGSYADDGIYVLLKEVLDNSIDEYMMG
YGKTIEVTVEEGTVSVRDYGRGVPLGKVVDVSSKMNTGAKYDSKAFKKSVGLNGVGIKAV
NALSSYFLITSYRDGECKRVEYNKAVITEETPICPTEEANGTLTYFIPDKEIFKDYQYKD
EYIESLLKNYVFLNSGLTIVFNGKKFHSRNGLVDLLNENMTTEPLYPIVHLKGEDIEVVI
THSNQYGEEYYSFVNGQHTTQGGTHLSAFREALGRVIKEYYNKNFEYSDIRAGVVAAISI
KVEEPVFESQTKTKLGSKDMGPDGPSVGKFVGDFIKKELDNYLHKNAETSDALLRKIQES
EKERKAIAGVTKLARERAKKANLHNKKLRDCRIHLNDTKGDNLEDSCIFITEGDSASGSI
TKSRDPNLQAVFSLRGKPLNSFGLTKKIVYENEEFNLLQAALNIEDGLEGLRYNKVIIAT
DADVDGMHIRLLLITFFLQFFPDLIKRNHVYILQTPLFRVRNKQKTWYCYSEEERVNAIA
AAGKNAEITRFKGLGEISPDEFKHFIGKDIRLDPVTMKKEDLVKDMLEFYMGKNTMERQN
FIIDNLVVEEDVIN
NT seq 1845 nt   +upstreamnt  +downstreamnt
atgcaacagccgacagcgtacaacgatgacgatatcaagacgcttgactggatggaacat
atccgtcgccgtcccggtatgtatatcgggaaattaggagacggtagttatgccgatgac
ggtatttatgtattgctgaaagaggtgctggataactccatcgacgaatatatgatgggt
tacggtaaaaccatagaagtgaccgtcgaagaaggcaccgtctccgtacgcgactatggc
cgcggcgttccgctgggcaaggtagtcgatgtctccagcaagatgaataccggagcaaag
tacgatagcaaggctttcaaaaagtcggtcggattgaacggagtcggaatcaaagccgta
aatgcgttgagcagctatttcctgatcaccagttaccgggacggcgaatgcaagcgggta
gaatacaacaaggcagtcatcacggaggaaaccccgatctgcccgacggaggaggcaaac
gggacgctcacctatttcatcccggacaaagagatattcaaggattaccagtataaagac
gaatatatcgagagtctgctgaagaattacgtgttcctcaactccggactgacgattgtc
ttcaacggcaagaagttccattcacgcaacggccttgtggacctgctgaacgagaacatg
acgacagagcctttatatccgatcgtccacctgaagggagaagacatagaagtggtcatt
acccacagtaaccagtacggagaagaatattactcgttcgtcaacgggcaacatacaaca
cagggaggtacgcacctctccgccttccgcgaagcgttgggacgtgtcataaaggaatat
tacaacaagaacttcgaatactcggacattcgcgccggcgtggtggcggccatcagcatc
aaggtggaggaaccagtattcgagagtcagacaaagaccaagttaggctcgaaagacatg
ggaccggacgggccttcggtcggcaagtttgtcggggacttcatcaagaaggaattggac
aactacctgcacaagaacgcagagacatcggacgccctgctgcgtaagatccaggaatcg
gaaaaagaacgcaaggcgatcgccggtgtgaccaagctggcccgcgaacgggcaaagaag
gccaacctgcacaacaagaaactgcgcgactgccgtatccacctaaacgacacgaaaggc
gacaatctggaagacagctgcatcttcattaccgagggagactcggcaagcggttctatt
acgaaaagccgcgatccgaacctgcaagcggttttcagccttcgcggcaaaccgttaaac
agtttcggactgacgaagaagatcgtgtacgaaaacgaagaattcaatttgctacaggct
gcattgaacatagaggatggattggaaggcttacgttacaataaggtgatcattgcgacc
gatgccgatgtggacggtatgcatatccgcctactactgatcaccttcttcctccagttt
ttcccggacctgatcaagcggaaccatgtctatatcctgcaaacaccactgttccgtgta
cgcaacaagcagaagacctggtattgctacagcgaagaagagcgtgtgaacgcaatcgct
gccgccggaaaaaacgccgagatcacccggttcaaaggtttgggagagatctcaccggat
gagttcaagcattttatcggaaaggatatccgcctggacccggtaaccatgaagaaagag
gaccttgtgaaagatatgctggagttctatatgggcaagaatacgatggaacgacagaac
tttatcatagataacttagttgtagaagaagacgttatcaattga

DBGET integrated database retrieval system