Phototrophicus methaneseepsis: G4Y79_12665
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Entry
G4Y79_12665 CDS
T07940
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
pmet
Phototrophicus methaneseepsis
Pathway
pmet00521
Streptomycin biosynthesis
pmet00523
Polyketide sugar unit biosynthesis
pmet00541
O-Antigen nucleotide sugar biosynthesis
pmet01100
Metabolic pathways
pmet01110
Biosynthesis of secondary metabolites
pmet01250
Biosynthesis of nucleotide sugars
Module
pmet_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
pmet00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
G4Y79_12665 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
G4Y79_12665 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
G4Y79_12665 (rfbC)
Enzymes [BR:
pmet01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
G4Y79_12665 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QPC80565
UniProt:
A0A7S8IBL4
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All DBs
Position
2929270..2929836
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AA seq
188 aa
AA seq
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MPKFEQLSLPGAYVITLEPIGDKRGYFVETYRADAYASHGLVTNWLQENQSLSSRKYTLR
GMHLQMPPHAQTKLFRVLQGAALDVIVDLRVGSPTYGQSAAVELTEDNNRLIYIPRGFAH
GFCTVTEDVIVSYKVDAYYAPQSEAGLLWNDPALNIDWPCDKPILSEKDGKLPRLAEFES
PFEMPAQA
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagtttgagcagctatcgttaccgggggcttatgtgattacgctggagccaatt
ggggacaagcgtggttattttgtggaaacttaccgcgcagatgcctatgcgtcgcacgga
ttggtgacgaattggctgcaagagaatcagtccctttctagccgtaaatatacgctgcgt
ggaatgcacctccagatgccgccccacgcacagacaaaattattccgcgtcctacaaggt
gcagccctggatgtcattgtggatttacgagttggttcaccaacctatgggcagagcgcg
gcggttgaactcacagaggataacaatcggttgatctatatcccacgtggctttgcacat
ggcttttgcacggtgacagaagatgtgattgtttcttataaggtggatgcttattacgcc
ccccaatcagaagcaggcttgctgtggaacgatccggctctgaatattgattggccctgt
gataagccgattctttctgagaaagatggcaagctgccacgactggcggaatttgaatca
ccgtttgaaatgccagcacaagcctga
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