Pseudoxanthomonas mexicana: H4W19_11955
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Entry
H4W19_11955 CDS
T06805
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
pmex
Pseudoxanthomonas mexicana
Pathway
pmex03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H4W19_11955 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmex03019
]
H4W19_11955 (rhlB)
Enzymes [BR:
pmex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
H4W19_11955 (rhlB)
Messenger RNA biogenesis [BR:
pmex03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
H4W19_11955 (rhlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RhlB
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
QND79081
UniProt:
A0A7G6UJ84
LinkDB
All DBs
Position
complement(2501706..2503382)
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AA seq
558 aa
AA seq
DB search
MSDKPLTDITFSSFDLHPALLAGLEGAGFSRCTPIQAMTLPVALAGRDVAGQAQTGTGKT
LAFLVAVMNRLLSRPALAERKPEDPRALILAPTRELAIQIHKDAVKFGADLGLRFALVYG
GVDYDKQRELLQKGVDVIIATPGRLIDYVKQHKVVSLHACEVCVLDEADRMFDLGFIKDI
RFLLRRMPERTTRQTLLFSATLSHRVLELAYEHMNEPEKLVVETEFITAAKVRQKLYYPA
DEEKIPLLIGLLSRSEGARTMVFVNTKAFVERVARALERAGYRVGVLSGDVPQKKRESLL
KKFQAGQLELLVATDVAARGLHIDGVSHVFNFDLPFDAEDYVHRIGRTARLGAEGDAISF
ACERYAMSLPDIEAYIEQKIPSEPVTAELLTALPRPERPKPVAGEGDDEEESIGQIFREA
REQKAADEERRGGGRKPGGAGGAGRRDGTRRDGPRSADGKPRPPRAPRAPRPEGEAAAPV
APAAAVPRPEAAALPEGERKPRKRRRRRHGRPLEGAEGAVANVAPAAPKPVAAPKPADDN
AGFLTRLGRKIRALVSGG
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacaaaccgttaaccgacatcacgttctcctcgttcgacctgcatccggcgctg
ctcgccgggctggaaggcgcaggtttctcccgctgcacgccgatccaggcgatgacgttg
ccggtcgccctggcggggcgcgatgtcgccggccaggcgcagaccggcaccgggaagacg
ctggcgttcctggtggcggtgatgaaccgcctgctgagccgcccggcgctggccgagcgc
aagcccgaggatccgcgcgcgctgatcctggcgcccacgcgcgaactggccatccagatc
cacaaggacgcggtgaagttcggtgccgacctgggcctgcgcttcgccctggtctacggc
ggcgtggactacgacaagcagcgcgaactgctgcagaagggcgtggacgtcatcatcgcc
acgcccggccggctgatcgactacgtcaaacagcacaaggtggtcagcctgcacgcctgc
gaggtgtgcgtgctggacgaagccgaccgcatgttcgacctgggcttcatcaaggacatc
cgtttcctgctgcggcgcatgcccgagcgcaccacccggcagacgctgctgttctcggcc
accctctcgcaccgcgtgctggaactggcctacgagcacatgaacgagccggagaagctc
gtcgtcgaaaccgagttcatcaccgcggccaaggtgcggcagaagctgtactacccggcc
gacgaggagaagatcccgctgctgatcggcctgctgtcgcgcagcgagggcgcacgcacc
atggtgttcgtcaacaccaaggcgttcgtcgagcgcgtggcgcgcgcgctggagcgcgcc
ggctaccgcgtcggcgtgctgtccggcgacgtgccgcagaagaagcgcgagtcgttgctg
aagaagttccaggccggccagctggaactgctggtggccaccgatgtggccgcgcgcggc
ctgcatatcgatggcgtgtcgcacgtgttcaacttcgacctgccgttcgatgccgaggac
tacgtgcaccgcatcggccgcaccgcgcgcctgggcgccgagggcgatgcgatcagcttc
gcgtgcgagcgctatgcgatgtcgctgcccgacatcgaggcctatatcgagcagaagatc
ccgtccgagccggtcaccgcggagctgctgacggcgctgccgcgtccggagcgtccgaag
ccggtggcaggcgaaggcgatgacgaagaagaaagcatcggccagatcttccgcgaggcg
cgcgaacagaaggccgccgacgaagaacgccgtgggggtggccgcaagcccggtggcgcc
ggcggtgccggtcgtcgcgacggtacccgccgcgacggtccgcgttcggccgacggcaag
ccgcgcccgccgcgcgcaccgcgtgcgccgcgccccgaaggcgaggcggccgcaccggtg
gcgcccgccgctgccgtgccgcgtcccgaggccgccgcgctgcccgaaggcgagcgcaag
ccgcgcaagcgccgtcgccgccgtcatggccgtccgctggaaggggccgagggcgccgtg
gcgaatgtcgcaccggccgcacccaagccggtcgcggcaccgaagcctgccgacgacaat
gcgggtttcctgacccggctgggacgcaagatccgcgcgctggtatccggcggctga
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