KEGG   Pseudomonas mendocina NK-01: MDS_0018
Entry
MDS_0018          CDS       T01473                                 
Name
(GenBank) hypothetical protein
  KO
K11913  type VI secretion system protein
Organism
pmk  Pseudomonas mendocina NK-01
Pathway
pmk02025  Biofilm formation - Pseudomonas aeruginosa
pmk03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pmk00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    MDS_0018
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    MDS_0018
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pmk02044]
    MDS_0018
Secretion system [BR:pmk02044]
 Type VI secretion system
  Imp/Vas secretion system related proteins
   MDS_0018
SSDB
Motif
Pfam: T6SS_FHA_C FHA Yop-YscD_cpl AMP-binding
Other DBs
NCBI-ProteinID: AEB56049
LinkDB
Position
complement(23656..25065)
AA seq 469 aa
MALRLTITSYHKITPGQCPEKTLEHGVMAIGRSPDNDWVLPDPARLVSSKHCLVQNKDGR
YYITDNSTNGVELVKAGIRMQRGNSELLQHGEVIRIGEYEIAVALESSIAEGTGPFSSVS
SASSFEALMANQQAAPSSPFEAPANPFDASASAHLQSVAPHETLPDLFDFLGPNTAAPAP
VADHVPAQQHDFRPPEFKTPTPAVEPKPTSAPGLIPDDWNLFDDIAPTTAPAAPMPAPSP
RPEPIEPAPMPAPVAVPAAPITTPPMQAQAVQQGDALLQAFLRGAGLDRLRLDDQQAAAQ
MESIGRSYRLMVEGLIDVLRARSSLKGEFRLQQTMVQPVENNPLKFAPNAEEALLLLLRG
GNSAFMPADQAVQDGFEDLRAHQLAVMAGVQAAIRHLLARFEPQALEARMGKGGGLASLL
PGSRQAQCWQQFVELYATLSREAEDDFQDLFGREFGRAYEQHIARQRRP
NT seq 1410 nt   +upstreamnt  +downstreamnt
atggcgctgcgcttgaccatcaccagctatcacaagatcacaccaggccaatgtcccgag
aaaaccttggaacatggcgtgatggcaattggccgcagcccggataatgactgggtatta
cctgatccggcacgtctggtctcgtccaaacattgcctcgtgcaaaacaaggatggccgc
tactacatcaccgacaacagcaccaatggcgtcgaactggtcaaggccggtatacgcatg
caacgcggaaacagtgaacttctgcagcacggcgaagttatccggattggcgagtacgaa
attgcagtagcgctggaaagttccatcgcggaaggcaccgggccgttttccagtgtctcg
tccgcaagcagtttcgaagcgctgatggccaaccagcaggccgctccaagcagccctttc
gaagcgccggccaaccccttcgatgcctcggccagcgcccacctgcaaagcgtcgccccg
cacgaaacgttgcccgatctgttcgattttctcggcccgaacacggcagcgccggcgccc
gttgccgaccacgtaccggcgcagcagcatgacttccggccaccggagttcaagacgcct
accccagcagtcgaacccaaaccaaccagcgcgccgggcctgattcccgatgattggaac
ctgttcgacgacatcgcgccgaccaccgctccagcagcgccgatgccggccccttcccct
cgaccggagcccatcgagccggcacctatgccagccccggttgccgtaccagccgcaccg
attacgacgccccccatgcaggcgcaggcagttcaacaaggggatgcgctgctgcaggcc
ttcctgcgcggcgccgggctcgatcgcctgcgcctggatgaccagcaggcagccgctcag
atggaaagcatcgggcgcagttaccgcctgatggtcgagggcctgatcgatgtactgcgg
gcgcgcagcagcctcaagggcgagttccgcctgcagcagaccatggttcagccggtggaa
aacaacccgctgaagttcgcgcccaacgccgaagaagccctgctcctgctgctgcgtggc
ggtaactcggcgttcatgccggcggaccaggccgtgcaggacggtttcgaggacctgcgc
gcccatcaactggccgtcatggcgggtgtacaggctgccatccgtcacctgctggcgcgt
ttcgaaccgcaggcactggaagcacgcatgggcaagggaggtgggctggccagcctgctg
ccgggctcgcgccaggctcagtgctggcagcagttcgtggagctgtacgcgaccttgtcg
cgcgaagccgaagacgattttcaggacctgttcggccgcgagttcggccgggcctatgag
caacatatcgcccgtcaacgacgcccctga

DBGET integrated database retrieval system