Pseudomonas mendocina NK-01: MDS_0166
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Entry
MDS_0166 CDS
T01473
Name
(GenBank) protoheme IX farnesyltransferase
KO
K02257
heme o synthase [EC:
2.5.1.141
]
Organism
pmk
Pseudomonas mendocina NK-01
Pathway
pmk00190
Oxidative phosphorylation
pmk00860
Porphyrin metabolism
pmk01100
Metabolic pathways
pmk01110
Biosynthesis of secondary metabolites
pmk01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
pmk00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
MDS_0166
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
MDS_0166
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pmk01006
]
MDS_0166
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
pmk03029
]
MDS_0166
Enzymes [BR:
pmk01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.141 heme o synthase
MDS_0166
Prenyltransferases [BR:
pmk01006
]
Compound prenylation
Protoheme farnesyltransferase
MDS_0166
Mitochondrial biogenesis [BR:
pmk03029
]
Mitochondrial quality control factors
Mitochondrial respiratory chain complex assembly factors
Complex-IV assembly factors
MDS_0166
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UbiA
DUF2148
Motif
Other DBs
NCBI-ProteinID:
AEB56197
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All DBs
Position
177254..178153
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AA seq
299 aa
AA seq
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MATMLRTHSERATWRDYLELTKPRVVMLMLITSLVGMFLATRAGVPWTVLLFGNLGIGLC
AGAAAAVNHVVDRRIDSIMARTHKRPVTAGRVSPVAALTFALALAIAGMSLLMVFTNELA
AWLTLASLLGYAVIYTGFLKRATPQNIVIGGLAGAAPPLLGWVAVTGHLSAEPLLLVLII
FAWTPPHFWALAIHRKEEYAKADIPMLPVTHGEHYTKVHILLYTLVMFAVTLLPYAIHMS
GPLYLACAVLLGGRFLHWAWVLYRDSKPHAAINTFKYSIWYLFLLFIALLADHYLLLNI
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgatgctgcgcactcactccgaacgtgccacctggcgcgattatctggagctg
accaagccgcgggtggtgatgctgatgctgatcacctcgctggtcggcatgttcctcgcc
acccgtgccggtgtgccctggaccgtgctgctgttcggcaacctcggcatcggcctgtgc
gccggcgcggcggctgcggtcaatcacgtagtggaccggcgcatcgactcgatcatggcg
cgtacgcacaagcgtccggttacggcagggcgggtctcgccggtggcggcgctgaccttc
gccctggcactggccatagctggcatgagtctgctgatggtgttcaccaacgagctcgcc
gcctggctgaccctggcctcgttgctcggctatgcagtgatctacaccggctttctcaag
cgcgcgacgccgcagaacatcgtcattggcggcctggcgggcgccgccccaccgctactg
ggctgggtcgccgtcaccggtcacctgagtgccgagccgctgctgctggtgctgatcatc
ttcgcctggacgccgccgcatttctgggccctggctatccaccgcaaggaagaatatgcc
aaggccgatattcccatgctgccggtgacccacggtgagcactacaccaaggtgcatatc
ctgctctacaccctggtgatgttcgcggtaaccctattgccctacgccatccacatgagc
gggccgctttacctggcctgcgctgtgctgctgggcggccgcttcctgcactgggcctgg
gtgctgtaccgtgacagcaaaccgcacgccgcgatcaacaccttcaagtacagtatctgg
tacctgttcctgctgttcatcgcgctgctcgcggaccactacctgctgctgaatatctaa
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