Pseudomonas mendocina NK-01: MDS_1000
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Entry
MDS_1000 CDS
T01473
Name
(GenBank) uroporphyrin-III C/tetrapyrrole methyltransferase
KO
K07056
16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:
2.1.1.198
]
Organism
pmk
Pseudomonas mendocina NK-01
Brite
KEGG Orthology (KO) [BR:
pmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmk03009
]
MDS_1000
Enzymes [BR:
pmk01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.198 16S rRNA (cytidine1402-2'-O)-methyltransferase
MDS_1000
Ribosome biogenesis [BR:
pmk03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
MDS_1000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TP_methylase
Adeno_PIX
Motif
Other DBs
NCBI-ProteinID:
AEB57031
LinkDB
All DBs
Position
1098241..1099140
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AA seq
299 aa
AA seq
DB search
MSAHSINEVFPVSQPAVASVQPGSLYVVATPIGNLDDISARALRILRDVALIAAEDTRHS
ARLLQHFGIETPLAACHEHNERDQGGRFLARLQAGEDVALISDAGTPLISDPGYHLVRQA
RAAGFAVVPVPGACALIAALSAAGLPSDRFIFEGFLPAKAAGRRARLDQVREEPRTLIFY
EAPHRILECLQDMRDVFGDDRPALLARELTKTFETLQGLPLAELCDWVAADSNQQRGECV
VLVAGWLAPEGEEAVSAEALRVLDLLMAEMPLKRAAALAAEITGVRKNLLYQVALERKG
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctcattcaattaacgaggtgtttccagtgagtcagcccgcagtcgcaagcgtc
cagccaggcagcctttatgtggtcgccacgccgattggcaatctggacgatatcagtgcg
cgggccttgcggattctgcgtgacgtagcgctcatcgctgcagaggacacccggcattcg
gcgcgtctgctgcagcatttcggcatcgaaacgccgctggctgcctgtcatgagcacaac
gagcgtgaccagggcggccgctttctggcgcggctgcaggcaggtgaggatgtggcgctg
atttccgatgccggtacgccgctgatttccgatcccggttatcacctggtgcgccaggcg
cgtgcagccggcttcgcggtggtgccggtgccgggtgcctgtgcgctgatcgccgcgctg
tcggctgccggtctgccctcggatcgcttcatcttcgaaggctttctgccggccaaggct
gcggggcgtcgtgcgcggctggatcaggtgcgcgaagagccacgtacgttgatcttctac
gaggcgccgcaccgtatcctcgagtgcctgcaggacatgcgagatgtgtttggcgatgat
cgccccgcattgctggcgcgtgagctgaccaagactttcgagaccctgcaggggttgccg
ctagcagagctatgcgactgggtggccgcagacagtaatcagcagcgtggtgagtgcgtg
gtgctggtggcgggctggctggctccggagggtgaggaggcggtcagcgccgaagcgctg
cgtgtgctcgacctgctgatggcggaaatgccgctcaaacgagcggccgctctggcggcg
gagatcaccggggtgcgcaagaacctcctctatcaagtggctttggagcgcaagggctag
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