Pseudomonas mendocina NK-01: MDS_1995
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Entry
MDS_1995 CDS
T01473
Name
(GenBank) isopropylmalate isomerase large subunit
KO
K01703
3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:
4.2.1.33
4.2.1.35
]
Organism
pmk
Pseudomonas mendocina NK-01
Pathway
pmk00290
Valine, leucine and isoleucine biosynthesis
pmk00660
C5-Branched dibasic acid metabolism
pmk01100
Metabolic pathways
pmk01110
Biosynthesis of secondary metabolites
pmk01210
2-Oxocarboxylic acid metabolism
pmk01230
Biosynthesis of amino acids
Module
pmk_M00432
Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Brite
KEGG Orthology (KO) [BR:
pmk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00660 C5-Branched dibasic acid metabolism
MDS_1995
09105 Amino acid metabolism
00290 Valine, leucine and isoleucine biosynthesis
MDS_1995
Enzymes [BR:
pmk01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.33 3-isopropylmalate dehydratase
MDS_1995
4.2.1.35 (R)-2-methylmalate dehydratase
MDS_1995
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GFIT
Motif
Pfam:
Aconitase
Motif
Other DBs
NCBI-ProteinID:
AEB58026
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All DBs
Position
2202107..2203534
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AA seq
475 aa
AA seq
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MTGKTLYDKLWEMHEVKRRDDGSSLIYIDRHILHEVTSPQAFEGLRLAGRKPWRIDANIA
TPDHNVPTTKAERQGGLEAIADEVSRIQVQTLDENCDDFGILEFKMNDVRQGIVHVVGPE
QGATLPGMTVVCGDSHTSTHGAFGALAHGIGTSEVEHVLATQCLVAKKMKNMQVRVEGKL
PFGVTAKDIVLAVIGKIGTAGGNGHALEFAGSAIRDLSLEGRMTICNMSIEAGARVGLVA
VDEKTIAYVKDRPFAPKGSDWDKAVAQWHNLVSDADAVFDTVVELKAEDIKPQVSWGTSP
EMVLAVDQNVPDPAVEADPVKKDSITRALKYMGLAANQPITDIQLDRVFIGSCTNSRIED
LRAAAEVAKGRKVAATVKQALVVPGSGLVKAQAEAEGLDKIFIEAGFEWREPGCSMCLAM
NPDKLGSGEHCASTSNRNFEGRQGAGGRTHLVSPAMAAAAAVTGRFIDVRELIQA
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgactggcaagacgctctacgacaagctctgggaaatgcacgaagtgaaacgtcgcgac
gacggttcctcgttgatctacatcgatcgccacatcctccatgaggtgacctcgccgcag
gcattcgaaggtctgcgtctggccgggcgtaagccgtggcgcatcgacgccaatatcgcc
acgccggatcacaacgtgccgaccaccaaagccgagcgtcagggtggcctcgaagccatc
gccgacgaagtttcgcgcatccaagtgcagaccctcgacgagaactgcgatgacttcggc
atcctcgaattcaagatgaacgatgtgcgtcagggcatcgttcacgtggtcgggccagag
cagggcgctaccttgccgggcatgaccgtcgtttgcggcgactcgcacacctccactcat
ggcgccttcggtgcgctggcccacggcatcggtacctccgaggtcgagcacgtgctcgcg
acccagtgtctggtggccaagaagatgaagaacatgcaggtgcgcgtcgaaggcaaattg
ccgttcggcgtcaccgccaaggacatcgtgctcgccgtgattggcaagatcggtaccgca
ggcggcaacggccatgcgctggaattcgccggtagtgccattcgcgatctgtcactggaa
gggcgcatgaccatctgcaacatgtccatcgaggctggtgcccgtgtgggcctggtggcg
gtggacgagaagaccatcgcctacgtcaaggaccgtccgttcgcacccaagggcagcgac
tgggataaggccgttgcacaatggcataacctggtgtccgacgccgatgcagtgttcgac
accgtggtcgaactcaaggccgaagacatcaagccgcaggtcagctggggcacctcgccg
gaaatggtcctggccgtcgaccagaacgtgccggacccggctgtcgaagccgacccggtg
aagaaggattcgatcacccgcgcgctgaagtacatgggcctggctgccaatcagccgatc
accgatatccagctggatcgcgtttttatcggctcctgcaccaactcgcgcatcgaagat
ctgcgcgccgccgccgaagtggccaagggccgcaaggtcgcggcgaccgtcaagcaggcg
ctggtggtgccgggctccggcctggtcaaggcgcaggccgaagcggaagggctggacaag
atcttcatcgaagccggtttcgaatggcgtgagccgggttgctccatgtgcctggcgatg
aacccggacaaactgggcagcggcgagcattgtgcctcgacctccaatcgtaacttcgaa
ggccgtcagggcgcgggtggtcgtacccacctggtcagcccggccatggctgccgctgct
gcggtgacaggccgcttcatcgacgttcgtgaattgatccaggcctga
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