Pseudomonas mendocina NK-01: MDS_4226
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Entry
MDS_4226 CDS
T01473
Name
(GenBank) formate dehydrogenase, beta subunit
KO
K00124
formate dehydrogenase iron-sulfur subunit
Organism
pmk
Pseudomonas mendocina NK-01
Pathway
pmk00630
Glyoxylate and dicarboxylate metabolism
pmk00680
Methane metabolism
pmk01100
Metabolic pathways
pmk01120
Microbial metabolism in diverse environments
pmk01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
pmk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
MDS_4226
09102 Energy metabolism
00680 Methane metabolism
MDS_4226
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Gene cluster
GFIT
Motif
Pfam:
Fer4_11
Fer4_7
Form-deh_trans
Fer4_9
Fer4_10
Fer4_2
Fer4_6
Fer4_21
Fer4
Fer4_4
Fer4_17
Fer4_16
Fer4_8
Fer4_3
Fer4_15
SfsA_N
Fer4_22
Fer4_18
DUF5557
Motif
Other DBs
NCBI-ProteinID:
AEB60257
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Position
4642017..4642913
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AA seq
298 aa
AA seq
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MSMQSQDIIKRSATNVLTPAPHVRDKKAEVAKLIDVTTCIGCKACQVACSEWNDIRDEVG
HNHGMYDNPIDLSADSWTVMRYDEYQNDESGRLEWLIRKDGCMHCADPGCLKACPQPGAI
VQYANGIVDFQSEHCIGCGYCIAGCPFNVPRISQKDNKAYKCTLCSDRVGVGQEPACVKT
CPTGAIRFGSKEDMLHYGAERVTELKGRGFAGAGVYDPQGVGGTHVMYVLQHADKPQLYH
KLPTDPRISSAIHGWKGWLKPVAAAAFFATLAGTLFHYVGVGANSLPEDEHATEEDKA
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgcaatctcaagacatcatcaagcgttcggccaccaacgtgctgacgcccgcg
ccccatgtgcgcgacaagaaggccgaagtggccaagctgatcgacgtgaccacctgcatc
ggctgcaaagcctgccaggtggcctgctcggagtggaacgacatccgcgacgaggtcggc
cacaaccacggtatgtacgacaaccccattgatctgagcgccgactcctggaccgtcatg
cgctatgacgagtaccagaacgacgaaagcggtcgcctggaatggcttatccgcaaggac
ggctgcatgcactgcgccgatccgggctgcctcaaggcctgcccgcaacccggcgccatc
gtgcagtacgccaacggcatcgtcgacttccagtccgagcactgcatcggctgcggctac
tgcatcgccggctgcccgttcaacgtgccgcgcatcagccagaaggacaacaaggcctac
aaatgcaccctgtgctcggaccgtgtcggcgtcggccaggagccggcctgcgtgaagacc
tgcccgaccggggcgatccgcttcggcagcaaggaagacatgctgcattacggcgcggaa
cgcgttaccgagctcaagggccgtggcttcgccggggccggcgtatacgacccgcaaggc
gttggcggcacccacgtgatgtacgtgctgcaacatgccgacaagccgcagctgtaccac
aaattgcccaccgatccgcgtatcagcagcgccatccacggctggaagggctggctcaaa
ccggtggcggccgctgcgttcttcgccaccctggccggcaccctgttccactacgtcggc
gtgggcgccaacagcctgcccgaagacgagcacgcaaccgaggaggacaaggcatga
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