Passer montanus (Eurasian tree sparrow): 120497730
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Entry
120497730 CDS
T07277
Symbol
SAMHD1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1 isoform X1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Pathway
pmoa03250
Viral life cycle - HIV-1
pmoa04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
120497730 (SAMHD1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
120497730 (SAMHD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmoa03400
]
120497730 (SAMHD1)
DNA repair and recombination proteins [BR:
pmoa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
120497730 (SAMHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HD
PDEase_I
HD_assoc_2
HARE-HTH
Motif
Other DBs
NCBI-GeneID:
120497730
NCBI-ProteinID:
XP_039555494
LinkDB
All DBs
Position
Unknown
AA seq
548 aa
AA seq
DB search
MLLDLPACAPELVRVCCPAERLEVLACLTQMQQQQQQQMEVMKVFNDPIHGHIELHPLLV
RIIDTPQFQRLRYIKQLGGTYFVFPGASHNRFEHSLGVGYLAGCLVRTLKERQPELGITQ
RDILCVEIAGLCHDLGHGPFSHMFDGRFIPLTRPGLNWKHETSSVQMFEHLIASNKLEEV
MRSNGLVLEEDMLFIKEQIGGPIDETACVKSWPYRGRPKEKSFLYEIVANKKNGIDVDKW
DYFARDCHHLGIPNNFDYKRLLIFTRVCEVGNQKHICTRDKEVGNLYEMFHTRNCLHRRA
YQHKTGNIIEIMITEAFQKADKYFEIRGSGGKVYRISTAMEDMEAYTKLTDCLYLEILHS
NHPELEEAREILRKIERRELYKFLGETRPESKKEIIKSNSLAESIANSKPEKDPPDVELK
AENFIVDVISMDYGMKEQNPIDKVHFYCKADPSKAVKISKEQVSKLLPKIFMEQVVRVYY
KSQDPRIISAAKQYFVQWCMQNDFTKPQDGDVVAPHLTPMKETWNKMTDDEHRRASEPSC
KQRLSFDK
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgctgctggacctgccggcctgcgcccccgagctcgtccgcgtctgctgcccagctgag
cgactggaagtgctggcgtgcctgacacagatgcagcagcagcagcagcagcagatggag
gtgatgaaggtttttaatgatcctattcatgggcacattgaattgcatcccctgcttgtt
cggatcatcgacacccctcagttccagcgcctgcggtatatcaagcagctgggtggcaca
tactttgtttttccaggagcctctcacaaccgctttgaacactccctgggggttggctac
cttgcaggatgtctggttcgtacactgaaggagagacagccagaactgggtataacccag
cgagacatcctttgtgtagaaattgctgggctttgtcacgatttgggtcatgggccattt
tcacacatgtttgatggaagatttattccactcactcgtccaggtttgaattggaagcat
gaaacttcttctgttcaaatgtttgagcacttgatcgcttccaataagctagaagaagtc
atgaggtccaatggtcttgtcctggaagaagatatgttgttcatcaaggaacaaatagga
gggcctatagatgaaactgcctgtgtgaagtcgtggccctaccgtggtcgaccaaaggag
aaaagtttcctctatgagattgtagctaataaaaaaaatggcattgacgttgacaagtgg
gattattttgcaagggattgccatcacctgggaatcccgaataattttgactataagcgc
ttgctgatcttcactcgggtctgtgaagtgggaaaccagaagcacatctgcacccgtgac
aaggaagttggaaatttgtacgagatgttccacacccggaattgcctgcaccggagagca
taccagcataaaactggcaacatcattgaaataatgataacagaagcctttcaaaaagca
gacaaatattttgaaataagaggctctggaggaaaagtgtatcggatttctacagcaatg
gaggacatggaagcctacactaaactaactgactgtctctacctggaaattctgcactca
aatcacccagaactggaggaggcacgagaaattctgcgtaaaatagaacgacgtgaatta
tacaagtttttaggagagactcgacctgaatcaaagaaggaaattataaagagcaacagc
ctggcagaaagcattgctaattccaagccagagaaggaccctccagatgtggagctaaag
gctgagaacttcatagttgatgttatcagcatggattatggaatgaaggaacagaatcca
attgataaggttcacttctattgcaaggctgatccttccaaggcagtcaaaatcagtaaa
gagcaggtttcaaagcttttgcccaaaatatttatggagcaggttgtccgggtttattac
aaaagtcaggatccacgtattatttcagctgcaaaacagtactttgttcagtggtgcatg
cagaatgatttcaccaaaccacaggatggtgatgttgttgctcctcacctaactccaatg
aaggaaacctggaataagatgacagatgatgaacacaggagagcctcagaacccagctgt
aaacaaaggctttcttttgataagtag
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