Passer montanus (Eurasian tree sparrow): 120500741
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Entry
120500741 CDS
T07277
Symbol
THOC1
Name
(RefSeq) THO complex subunit 1 isoform X1
KO
K12878
THO complex subunit 1
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Pathway
pmoa03013
Nucleocytoplasmic transport
pmoa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120500741 (THOC1)
09122 Translation
03013 Nucleocytoplasmic transport
120500741 (THOC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmoa03019
]
120500741 (THOC1)
03041 Spliceosome [BR:
pmoa03041
]
120500741 (THOC1)
Messenger RNA biogenesis [BR:
pmoa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
120500741 (THOC1)
Spliceosome [BR:
pmoa03041
]
Complex C
Other components
EJC/TREX
120500741 (THOC1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
120500741 (THOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Death
bDLD3
Motif
Other DBs
NCBI-GeneID:
120500741
NCBI-ProteinID:
XP_039561951
LinkDB
All DBs
Position
Unknown
AA seq
664 aa
AA seq
DB search
MSPPLFSLPEARLRFTTSTREALINKSIKPLLNAFNQVPGSENEKKCTLDQAFRVVVEEE
IINKAPCENLLAIISLAINGVTEGICTASTPFVLLGDVLDCLPLDQCDKIFTFVEKNVAT
WKSNTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQFN
LENVTVFNTNEHESTLGQKHTEEREEGMDVEEGEMGDDEAPTSCSIPIDYNLYRKFWSLQ
DYFRNPVQCYEKVSWKTFLKYSEEVLAVFKSYKLDDTQASRKKLEELKTGGEHVYFAKFL
TSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYVLTDEQSLWIEDTTKAVYQ
LLSENPPDGERFSKMVEHILNTEENWNSWKNEGCPSFVKERSHPEFQLGPPDSKPMRPVR
KRPAPEDFLGKGSNKKILMGNEELTRLWNLCPDNMEACKSESREYMPTLEEFFEEAIEQA
DPENMVENKYKAVNNSNYGWRALRLLARRSPHFFQPTNQQFKSLPEYLENMVIKLAKELP
PPSEEIKTGEDEDEEDNDALLKENNESPEVQRDKAMTGEQIESFASRLGEQWKALAPYLE
MKESDIRQIELDSEDVKMRAKQLLVAWQDQEGTHATPENLIAALTKAGLGDLAESLSNDT
EGSS
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgtcgccgccgctcttcagcctgcccgaggcgcggctccgcttcacgacatccaccaga
gaggctctgattaacaaaagcatcaagccgttgttgaatgcatttaaccaggttcctgga
agtgaaaatgaaaagaagtgtaccttggatcaagcttttagagttgttgtagaagaagaa
ataataaacaaagctccatgtgagaatctcctggcaattatttctcttgctattaatgga
gtcacagagggtatctgcactgcatcaactccttttgtgcttttgggggatgttctggat
tgccttcctttggatcagtgtgacaaaattttcacttttgtggagaaaaatgttgccacg
tggaaatcgaacacattttactctgcagggaagaattacttgctgcgcatgtgcaatgat
ctcctaagaagattatctaagtcacaaaacacagtcttttgtggaagaattcagctgttc
ttggctaggttatttccactttcagaaaagtcagggcttaacctacagagtcagtttaac
ctggaaaatgtcactgttttcaataccaatgaacatgagagcactctgggacagaagcac
actgaggagagggaagaaggaatggatgtggaagaaggtgaaatgggagatgatgaagca
ccaacaagttgttccattccaatagattataacctgtatagaaaattctggtcacttcaa
gattattttagaaatcctgtgcagtgctatgagaaggtgtcatggaaaacatttcttaag
tactcagaagaagttttggctgttttcaaaagttacaaattggacgatactcaggcttcc
cgaaaaaagttggaagaactaaaaacaggaggagaacatgtgtattttgctaagttccta
actagtgaaaagctgatggatttacagctgagtgacagtaacttccgtcgtcacatcttg
ttgcagtacctaatactctttcagtatctaaagggacaagtaaaatttaaaagttcaaac
tatgttctaacagatgaacagtctctttggattgaagatactacaaaagcagtctaccag
cttctttcagaaaatcctccagatggggaaagattctcaaaaatggtagagcatatatta
aatactgaagaaaactggaactcgtggaaaaatgagggctgcccaagctttgtgaaagaa
agatctcatccagagtttcagcttggacctcctgattctaagccaatgaggcctgtgcgg
aagaggccagctccagaggacttcttaggaaaaggatcaaacaaaaaaatccttatgggg
aatgaggaactgacccgcctttggaatttatgtcctgataacatggaagcctgtaaatct
gagagcagggaatatatgccaacactggaggaattttttgaggaagctattgaacaagca
gaccctgaaaacatggttgaaaataagtataaggctgtgaacaattctaactatggctgg
agagcactgagacttctggcacgcagaagtccccacttcttccagccaacaaaccaacaa
ttcaagagtttacctgaatatctagaaaacatggtaatcaaattagccaaggagctgcct
cctccttctgaagaaataaaaacaggtgaagatgaagatgaggaagataatgatgcttta
ttaaaggaaaacaatgaaagtccagaggtgcaacgggacaaagccatgacgggcgagcag
atcgagtccttcgccagcaggctgggggagcagtggaaggccttggccccctacttggag
atgaaggaatccgatatccggcagattgagctggacagcgaggatgtgaagatgagagcc
aagcagctgctggtggcctggcaggatcaggagggcactcatgccacccctgagaacctg
atcgcggcgctgaccaaagccgggctcggggacctggccgaaagcctcagcaacgacacc
gaaggcagcagctaa
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integrated database retrieval system
