Passer montanus (Eurasian tree sparrow): 120503960
Help
Entry
120503960 CDS
T07277
Symbol
GTF2H4
Name
(RefSeq) general transcription factor IIH subunit 4 isoform X1
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Pathway
pmoa03022
Basal transcription factors
pmoa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
120503960 (GTF2H4)
09124 Replication and repair
03420 Nucleotide excision repair
120503960 (GTF2H4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmoa03021
]
120503960 (GTF2H4)
03400 DNA repair and recombination proteins [BR:
pmoa03400
]
120503960 (GTF2H4)
Transcription machinery [BR:
pmoa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
120503960 (GTF2H4)
DNA repair and recombination proteins [BR:
pmoa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
120503960 (GTF2H4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
120503960
NCBI-ProteinID:
XP_039568988
LinkDB
All DBs
Position
Unknown
AA seq
514 aa
AA seq
DB search
MALPRAQLQCVPRCAQVSLRCLSGVTRVSHRCPGVPRCVSQVCPPGAMALPRAQLQCKNL
QEFLRGLSPPTLDRLYGHPATCLAVFRELPGLAQAGIMRMLFLEQPLPQAAVGLWVKKEH
SREQQQSQEVLLELRLWHPHTLPGGLPGVALHPNFRQNLRVALLGGGKAWSDDTAPLGPD
RHARDVPALDKYAEERWEVVLHFMVGSPSAAVSQDLAQLLVQAGLMKSEGGEPPCITSAG
FQFLLLDTPAQLWFFILQYLRGAEARGMDLVEILSFLFQLSFSTLGKDYSVEGMSESLLT
FLQHLREFGLVFQRKRKSRRFYPTRLAIALASGTAGTSLGTAGTGLGTAGTEPDGHGFIL
VETNYRIYAYTDSELQVALIALFSELLYRFPNLVVAQVTRDSVQAAIANGITAEQIIHFL
RTRAHPVMAKQSPVLPPTITDQIRLWELERDRLRFSEGVLYNQFLSQVDFEVLRDHARAL
GVLVFENPARRLMVVTPAGHPDVKRFWKRQKHNG
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgccgcgggcgcagctgcagtgtgtgcccaggtgtgcccaggtgtcactcagg
tgtctctcaggtgtcactcgggtgtcacacaggtgcccaggtgtgcccaggtgtgtctcc
caggtgtgccccccaggtgcgatggcgctgccgcgggcgcagctgcagtgcaagaacctg
caggagttcctgcgggggctcagcccccccacgctggaccggctctacgggcaccccgcc
acctgcctggccgtcttcagggagctgccaggcctggcccaggccgggatcatgcggatg
ctgttcctggagcagcccctgccccaggcggccgtggggctctgggtcaagaaggagcac
agcagggagcagcagcagagccaggaggtgctgctggagctgcgcctgtggcacccccac
accctcccgggggggctcccgggggtcgccctgcaccccaacttccgacagaacctgcgc
gtcgccctgctcggggggggcaaggcctggtcggacgacacggccccgctgggcccggac
cggcacgcccgcgacgtgcccgcgctggacaagtacgccgaggagcgctgggaggtggtt
ttgcacttcatggttggatcaccgagcgccgccgtcagccaggacctggcgcagctgctg
gtgcaggccgggctcatgaagagcgaggggggcgagcccccctgcatcacctcggccggg
ttccagttcctgctgctcgacacccccgcccagctctggttcttcatcctgcagtacctg
cggggcgccgaggcgcgggggatggacctggtggagattttgtccttcctgttccagctg
agcttctccaccctgggcaaggactactcggtggaggggatgagcgagtcgctgctcacg
ttcctgcagcacctgcgcgagttcgggctggtgttccagaggaagcggaagtcgcggcgg
ttctacccgacccggctggccatcgcgctggcctcggggacagcggggacatcgctgggg
acagcggggacagggctggggacagcggggacagagcccgacggacacggcttcatcctg
gtggagaccaactaccgcatctacgcctacacagactcggagctgcaggtggccctcatc
gcgctcttctcggagctgctctatcgcttccccaacctggtggtggcccaggtgacaagg
gacagcgtgcaggcggccatcgccaacggcatcaccgccgagcagatcattcacttcctg
cgcacccgcgcccaccccgtgatggccaaacagagcccggtgctgcccccgaccatcacg
gaccagatccggctctgggagctcgagcgggaccggctgcgcttctcggagggtgtgctg
tacaaccagttcctgtcccaggtggatttcgaggtgctgcgggaccacgcccgggccctg
ggggtgctggtgttcgagaaccccgcgcggcgcctgatggtcgtcacccccgccggccac
cccgacgtcaaacgcttctggaagcgccagaagcacaacggctga
DBGET
integrated database retrieval system
