Passer montanus (Eurasian tree sparrow): 120509918
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Entry
120509918 CDS
T07277
Symbol
USP47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47 isoform X1
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pmoa01002
]
120509918 (USP47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmoa04121
]
120509918 (USP47)
Enzymes [BR:
pmoa01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
120509918 (USP47)
Peptidases and inhibitors [BR:
pmoa01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
120509918 (USP47)
Ubiquitin system [BR:
pmoa04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
120509918 (USP47)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
Ubiquitin_2
ubiquitin
Sad1_UNC
Motif
Other DBs
NCBI-GeneID:
120509918
NCBI-ProteinID:
XP_039581101
LinkDB
All DBs
Position
Unknown
AA seq
1459 aa
AA seq
DB search
MDWRRGGAAALPAGAEELEAEEEEEEVEEEEEEEEEEEEEEEEQEEEKKGEDEPRASPRL
PLLLTTALGSACCGLRAAPPAMVPSEENQLVPKEDMFWSCRQSIFAEMKKKFSQAECAAE
EPRVLCIIQDTTNCKTVNERVTLNLPASTPLRRLFEDVAAKVGYVTGSFDLVWGNGDSVA
DTQTPIDQNSDKTILDAGFEPGKKNFLHLTDKDGEQPHIMQEESGTAEDGAQERFIGPLP
REGSIGCTHDYVSQSYSYSSVLSKSETGYVGLVNQAMTCYLNSLLQTLFMTPEFRNALYK
WEFEESEEDPERSIPYQLQRLFVLLQTSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCR
VMFDALEQKWKQTEQADLINQLYQGKLKDYVRCLECGYEGWRIDTYLDIPLVIRPYGSSQ
AFASVEEALHAFIQPEILDGPNQYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYT
TMHRIKLNDRMTFPEELDMSVFIDVEDEKSPQTESCTDSGAENEGSCHSDQMSNDFSNDD
GVDEGICLESNSAAERISKAGSEKSSLLYELFSVMVHSGSAAGGHYYACIKSFSDDQWYS
FNDQHVSKITQEDIKKTYGGSSGSRGYYSSAFASSTNAYMLIYRLKDPTRNAKFLEAHEY
PEHIKQLVQKERELEEQEKRQREIERNTCKIKLFCMHPTKQIMMENKLEVHKDRTLKEAV
EIAYKLMDLEEAVPLSCCRLVKYDEFHDYLERSYEGEEDTPMGLLLGGVKSTYMFDLLLE
TRRPDQVFQCYKPGEVMVKVHVVDLKTESVAPPISVRAYLNQTVSEFKQLISKATHLPAE
TMRVVLERCYNDLRLLNVSSKTLKAEGFFRSNKVFIESSESLDRHATYTDSQLWKLLDRH
ANTIRLYVSLPEQAPGSQLRRALYQKAGGGAGNLDESCERVKGPVGNMKSVEAILEESTE
KLKSLSLQQQQQQEGDNGDSSKSTEASDFENIESPLNEVDSSASAENRELENQIQISDAE
NLQSEERSDSDVNNDRSTSSVDSDILSSSHSSDTLCNVDNAPLPLANGLDSHSITSSRRS
KANQGKKETWDTAEEDSGTDSEYDESGKSRGEAQYMYFKSEPYTAEEGSGEGQKWLMVHV
DKRITLSAFKQHLEPFVGVPSSHFKVFRVYASNQEFESVRLNETLSSFSDDNKITIRLGR
ALKKGEYRVKVYQLLVNEPEPCKFLLDAVFAKGMTVRQSKEELLPQLREQCGLDLTIDRF
RLRKKTWKNPGTVFLDYHIYEEDINISSNWEVFLEILDGVEKMKSMSQLAVLSRRWRPSE
MKLDSFQEVVLESSSVEELKEKLSEISGIPLENIEFAKGRGTFPCDISILEIHQDLDWNP
KVSTLNVWPLYICDDGAVIFYRDKTEDLMELTDEQRNELMKKESSRLQKTGHRVTYSPRK
EKALKIYLDGAPNKDLTQD
NT seq
4380 nt
NT seq
+upstream
nt +downstream
nt
atggattggcggcggggcggggccgcggcgctgcccgcgggagcggaggagctggaagcg
gaggaagaggaggaggaggtggaagaagaagaggaagaagaagaggaggaagaagaagaa
gaagaggagcaggaggaggagaagaagggggaggatgagccgcgggcgtccccccgcctc
ccgctgctactgacgacggcgctcggttcagcctgctgcgggctccgcgccgcgccaccg
gccatggtgcccagcgaggagaaccagctcgtccccaaagaggatatgttttggagttgc
agacaaagtatctttgctgaaatgaagaagaagttttcacaggcagaatgtgctgctgag
gagcccagggtgctgtgcataatccaggacaccacgaattgcaagacggtgaacgagcgg
gtcaccctgaacctgccagcctccaccccgctcaggcgcctctttgaggacgtggctgcc
aaagtgggctacgtcaccggctcctttgatttggtgtggggcaatggggacagtgtcgcc
gacacgcagactccaatagatcagaacagtgacaaaaccattctggatgctggttttgag
ccagggaagaagaactttctgcatttgacagacaaggatggcgagcagcctcacataatg
caggaggagtcaggtacagcagaggatggtgcacaggagagatttataggcccccttcca
agagagggctccattggatgtacccatgactatgtcagtcaaagctattcctactcttca
gtcctgagcaaatcagagacaggttatgtggggctggtaaatcaagcaatgacttgctac
ttgaacagccttctgcaaacacttttcatgactcctgaatttagaaatgcattgtataag
tgggaatttgaggaatctgaagaggatcctgagaggagtatcccctaccagcttcaaaga
ctgtttgttttactgcagaccagcaaaaaaagggcaattgaaacaactgacgttacacgg
agttttggatgggacagtagtgaagcatggcagcagcatgatgtacaggagctttgtaga
gtcatgtttgatgctttggagcagaaatggaagcaaacggagcaggctgatcttataaat
caactgtaccaaggcaaactgaaggactatgtgaggtgcctagagtgtggctatgaaggc
tggaggatcgacacgtacctggatatccctctggtcatccggccctatggctccagccag
gcgtttgctagcgtggaagaagcactgcatgctttcattcagcctgagatccttgatggc
ccaaatcagtacttctgtgagcgatgtaagaagaaatgtgatgcaagaaagggtctgcgg
ttcttgcacttcccgtacctgctgacattacagctgaagagatttgactttgattatacc
acgatgcacagaattaaactcaacgatcgcatgacttttccagaggagttggacatgagt
gtctttattgatgttgaagatgagaagtctcctcagactgagagttgcactgatagtgga
gctgaaaatgaaggcagttgtcacagtgatcagatgagcaatgatttttctaatgatgat
ggagttgatgaaggaatctgccttgaaagcaatagtgcagcagagaggatctctaaagct
ggcagtgaaaagagttctttattgtatgagctcttttctgtcatggttcattctggaagt
gctgctggtggccattattatgcctgtataaaatcttttagtgatgatcagtggtacagc
tttaatgatcagcatgttagcaagataactcaggaagatattaagaaaacatatggagga
tcttctggaagcagaggatattattccagtgcttttgctagctccacaaatgcttacatg
ctgatatacagattgaaagatccaacaagaaatgcaaagtttcttgaagcgcatgaatat
ccagagcacattaaacaattggtacagaaagagagagaattagaagaacaagaaaagagg
caacgtgaaattgaacgcaacacatgcaagattaaattattctgcatgcatcctacaaag
caaataatgatggagaacaaattggaagttcacaaggacagaacactgaaggaagctgtg
gaaatagcttacaagttaatggatttagaagaggctgttcccctgagctgctgtcgcctt
gtcaaatacgatgagttccatgattacttggagcgctcctacgaaggagaagaggatacc
ccaatgggtttgttacttggaggggtcaagtcaacctacatgtttgacttactgttggaa
acaagaaggcctgaccaagttttccagtgctataaacctggtgaggtcatggtaaaggtt
catgtagtggacctgaagactgaatctgttgctcctccaataagtgtgcgagcttattta
aatcaaacagtttcagagtttaaacaactaatttcaaaggccacacacctgcctgctgaa
accatgcgggtggtgctggagcggtgctacaacgacctgcgtctgctgaacgtgtccagc
aaaacactgaaagctgaaggctttttcagaagcaacaaggtgttcattgaaagctcagag
tctttggaccgtcatgcgacatacacagactctcagctgtggaaacttctggatcgccat
gcaaacaccatcagactgtacgtttcattgccagagcaagctcccggatctcagctcaga
cgggcactttatcagaaggctggtgggggtgcaggcaacttggatgaatcttgtgaaaga
gtaaaaggacctgtaggtaatatgaagtccgtggaggcaattttggaagaaagcactgaa
aaacttaaaagcttgtctctgcagcaacagcagcagcaggagggagacaatggagacagc
agcaaaagcacagaagctagtgattttgaaaacattgagtcacctttaaatgaagtagac
tcttcagcatcagcagaaaacagagaacttgagaaccaaattcagatttctgatgcagag
aacctgcagtccgaggagcggtctgactcggatgtcaataacgacaggagtacgagttca
gtggacagtgacatcctcagctccagccacagcagtgacactctgtgcaacgtggacaat
gcccccctccccctggccaatgggctggattctcacagcatcacaagtagcaggcgatca
aaagccaatcagggcaagaaggaaacctgggacacagcagaagaggattctggaacagac
agtgaatatgatgaaagtggcaagagcagaggagaagcacaatatatgtactttaaatca
gagccctacactgcagaggagggttcaggagaagggcaaaaatggctgatggtgcatgtt
gataaaagaattacactgtctgccttcaagcaacatttggagccttttgttggagttcca
tcttctcacttcaaagtctttagagtctatgccagcaatcaagagtttgagagtgttcgg
ctgaatgagaccctttcgtcattttctgatgataataagataactattagacttggaaga
gcccttaagaagggtgaatacagagttaaagtctatcagctcttggtaaatgagcctgag
ccgtgcaagtttcttctggatgcagtttttgctaaaggaatgactgtccgacagtccaaa
gaggaactgcttcctcagcttcgagaacaatgtggcctagacttgacaattgacaggttt
cgcctacgaaagaaaacctggaagaatccaggcactgtgtttctggattatcatatctat
gaagaagatatcaatatttccagcaactgggaggtcttcttagaaatacttgatggagta
gaaaagatgaagtccatgtcacaacttgctgttttatcgagacgatggaggccatcagag
atgaaattagattctttccaggaagtggtactagaaagcagcagtgttgaagaattaaaa
gagaagctaagtgaaataagtggaatacccttagaaaacattgaatttgcaaagggtaga
ggaacctttccctgcgacatttccatactagagattcatcaagacttggactggaatccg
aaagtatctacattgaatgtctggcccctgtacatttgtgatgatggtgcagtaatattt
tatagggataaaactgaagacttaatggaattaacagatgagcaaagaaatgaactgatg
aaaaaagaaagcagcagactccagaaaactggacaccgggtaacctactctccccgtaaa
gaaaaagcactaaaaatttatctggatggagcaccaaataaagatttgactcaagactga
DBGET
integrated database retrieval system
