Passer montanus (Eurasian tree sparrow): 120512381
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Entry
120512381 CDS
T07277
Symbol
RC3H2
Name
(RefSeq) roquin-2 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmoa03000
]
120512381 (RC3H2)
04121 Ubiquitin system [BR:
pmoa04121
]
120512381 (RC3H2)
Transcription factors [BR:
pmoa03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
120512381 (RC3H2)
Ubiquitin system [BR:
pmoa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120512381 (RC3H2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-CCCH
zf-RING_UBOX
zf-RING_2
zf-CCCH_4
zf-C3HC4_3
Prok-RING_4
zf-C3HC4
zf_CCCH_4
zf-C3HC4_4
zf-C3HC4_2
Xin
Motif
Other DBs
NCBI-GeneID:
120512381
NCBI-ProteinID:
XP_039586550
LinkDB
All DBs
Position
Unknown
AA seq
1191 aa
AA seq
DB search
MPVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPFDQTAINTD
IDVLPVNFALLQLVGAQVPDHQTVKLSNVGENKHYEVAKKCVEDLALYLKPLSGGKGVAS
LNQSALSRPMQRKLVTLVNCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNRLRPHLELLANI
DPNPDAASPTWEQLENAMVAVKTVVHGLVDFIQNYSRKGHETPQPQPNSKYKTSMCRDLR
QQGGCPRGTNCTFAHSQEELEKYRLRNKKISATVRTFPLLNKVGVNSTVSTTTGNVISVI
GSPEATGKMVPSTNGIANLEPGVPQLIPRCADTSLRALDSTKKGGKTGANGQNASGSPTE
SLPENKIGSPPKTPVSQAAATSAGPPNIGTEVNSVPPKSSPFVPRVPVYPPHSDNVQYFQ
DPRTQLSYEVPQYPQTGYYPAPPTVPAGVAPCVPRFVRSNNVPESSLPPASVPYADHYST
FPPRDRLNSPYQPPPPQPYGPVPPVPSGMYAPVYDSRRIWRPQMYPRDDIIRSNSLPPMD
VMHSSVYQTSLRERYNSLDGYYSVACQPPNEQRTVPLPREPCGHLKTGYDEQLRRKPEQW
AQYHTQKTPLVSSTLPMATPSPTPPSPLFSVDFSTEFSESVSDLSGTKFEEDHLSHYSPW
SCGTIGSCINAIDSEPKDVIANSNAVLMDLDSGDVKRRVHLFETQRRAKEEDPIIPFSDG
PIISKWGAISRSSRTGYHTTDPIQATASQGSATKPISVSDYVPYVNAVDSRWSAYGSDSA
SSARYAERDRFIVTDLSGHRKHSSTGDLLSIELQQAKSNSLLLQREANALAMQQKWNSLD
EGSRLTLNLLSKEIDLRNGETDYPEDCADTKPDRDIELELSALDTDEPDGQGEQIEEILD
IQLGISSQEDQLLNGTTVENGHLLKQHQKESMEQKRQSLGEDLVILEEQKTILPVTSCFS
QPITTSVSNASCLPISTSVSVGSLILKTAHIMSEDKNDFLKPVANGRMVNS
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgcaggcagctcagtggacagaatttctgtcctgcccaatctgctacaatgag
tttgatgagaatgtgcacaaacccatcagcttaggttgctctcacaccgtgtgcaagacc
tgcctgaacaagctccatcgcaaggcatgtccttttgaccagactgccatcaacaccgac
atcgatgtgctccctgtgaactttgcactcctccagctcgttggagcccaggtacctgat
catcagacagtaaagttgagtaatgtaggagagaacaaacattatgaagtagcaaagaaa
tgtgttgaggatttggcactctacttaaagccattaagtggaggaaaaggtgttgcaagc
ttgaatcagagtgcactgagccgtcccatgcagaggaagcttgtgacactggtgaattgt
cagctggtggaggaggagggtcgggtcagagccatgagggcagctcggtcgctgggagag
agaactgtcacagaactcatcctgcagcaccaaaatcctcagcagctttctgccaatctt
tgggctgctgtcagggcacgagggtgccagtttctaggaccagctatgcaagaggaggca
ctgaaacttgtattactggcactggaagatggctctgcactctcaagaaaagttctggta
ctttttgttgtgcaaaggctggaaccaagatttcctcaggcctctaaaacaagcattggt
catgttgtgcagctactgtatagagcatcatgctttaaggtcactaaaagggatgaagat
tcttctctgatgcagcttaaagaagagttccggagttacgaggctttgcggagagagcac
gatgcccaaattgttcacattgccatggaagcaggacttagaatatcaccagagcagtgg
tcttcccttctgtatggagacctggcacataaatcacacatgcaatccattattgacaag
cttcaatctccagaatcttttgctaagagtgtacaagaattgacaattgtcttgcagcgc
acgggggatcctgcaaacttaaacaggctgaggcctcatttagagctcctggcaaacata
gatccaaatccagatgcagcatctccaacatgggagcagctggaaaatgcaatggtggct
gtaaagactgtggtccatgggctggtggatttcattcagaattacagtagaaaaggccat
gaaactccacagccacaaccaaatagcaaatacaaaacaagtatgtgccgagaccttcga
cagcaaggggggtgtccaagaggaacaaactgtacatttgctcattctcaggaagagctt
gaaaaatatcgcttgaggaacaaaaaaatcagtgcaacagtgagaacattcccccttcta
aacaaagttggcgtaaacagcaccgtctcaaccaccacgggaaacgtgatctctgtcata
ggaagcccagaggcaacgggcaagatggtgccaagtaccaatggaatagctaatctagaa
cctggggtgccccagctgatcccccgctgtgcagacacctccctgagagctctggacagc
accaagaagggaggcaagactggagccaatggccagaacgcttctgggtcccccacagaa
tcacttcctgaaaataaaatcggttctccacccaagactcctgtaagccaggcagcagct
acctcagctggtcctcctaatattggaacagaagtcaattctgtgcctccaaaatccagc
ccatttgttcccagagtacctgtctaccctccacattctgataacgttcaatatttccaa
gatcccaggactcagctgtcatatgaagttccacagtacccacagacagggtattaccca
gcacctccaacagtaccagctggtgtggctccctgtgttcctcgcttcgtgaggtccaat
aacgttccagaatcctccctcccacctgcctccgtgccatatgccgatcattacagcaca
tttccccctcgagaccgactgaattctccctaccagcctcctcctccgcagccctatggg
ccagtccctcctgtcccctctggaatgtacgctccagtctatgacagcaggcgcatctgg
cgcccacagatgtacccacgggatgatattattaggagcaattctttacctcccatggat
gtgatgcactcatctgtctatcagacatcattgagggagaggtacaactctctggatggg
tattactctgtggcttgtcaacctccaaacgagcagaggactgtgcctttaccaagggag
ccttgtggtcatttgaagactggttatgatgagcagctgagacggaagccggagcaatgg
gcacagtaccacacacagaaaactcctctggtatcgtcaacccttcctatggcaacgcca
tctccaacaccaccctctcctctcttcagtgtagatttcagcacagagttctcagagagt
gtcagtgatttgagtggaactaaatttgaggaagaccatctctctcactattcaccgtgg
tcttgtggcactattggctcttgtataaatgctatcgactcagagcccaaggatgtgatt
gccaattccaatgccgtgttaatggatttggacagtggggacgttaaaaggagagtgcat
ttatttgaaacgcagagaagggcaaaggaggaagatccgataatcccgttcagcgacgga
cccatcatctccaagtggggtgcaatctccaggtcatcccgcacaggttatcacacaaca
gatccaatccaggccactgcttcccaaggaagtgctactaagcccatcagtgtatcagat
tatgtcccttatgtcaatgctgtagactcaagatggagtgcctatggctcagattctgcc
tcttcagcacgttatgcggaacgggacaggttcatagtaacagatttgtctggtcacaga
aagcattccagcactggagatctactgagtattgaattacagcaggccaaaagcaactcc
ttactccttcagagagaggcaaacgcgcttgccatgcagcagaagtggaattctctagat
gaaggcagtcgtcttaccttaaaccttttaagcaaggaaattgatttgaggaatggtgag
actgattatcctgaagactgtgcagacacaaagccagaccgagacattgaattggagctg
tcagccctcgatacagacgaacctgatgggcaaggggaacagatagaagagattctggac
atacagctagggattagctcccaagaggatcagctgctcaatggaacaaccgtagagaac
gggcatctgctaaagcagcaccagaaagaatctatggaacagaagagacaaagtttaggt
gaagaccttgtgattctggaggagcagaaaacaatcctgcccgtaacttcttgcttcagt
cagccgatcacaacatctgttagcaatgcaagctgcctgcccatcagcacatcagtcagt
gttggcagcctcattttgaaaactgctcacattatgtctgaggataaaaatgacttttta
aagcctgttgcaaatggcaggatggttaacagctga
DBGET
integrated database retrieval system
