Passer montanus (Eurasian tree sparrow): 120513101
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Entry
120513101 CDS
T07277
Symbol
RBFOX1
Name
(RefSeq) RNA binding protein fox-1 homolog 1 isoform X1
KO
K14946
RNA binding protein fox-1
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmoa03041
]
120513101 (RBFOX1)
Spliceosome [BR:
pmoa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
120513101 (RBFOX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
120513101
NCBI-ProteinID:
XP_039588058
LinkDB
All DBs
Position
Unknown
AA seq
546 aa
AA seq
DB search
MSNSCGSPEDAGKQRGRDGRIRREDVDDSQPEGKRLKLGNEGGTAGKDREAATEDAIMPC
SGREEPVPEGGGEGKSDYKSDAMTLVSSAKNGPQGPVLTSLDASKAEETPQKPHASGAYC
FHEQSLLSDTKAECSSGVETEDRKSSKQQMSCEREQLRGNQEATAPPDTMAQPYASAQFA
PPQNGIPAEYTAPHPHPAPDYTGQTTVPEHTLNMYPPAQTHSEQSAADTNAQTVSGTATQ
TDDAAQTDGQQQTQSSENTENKSQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFN
ERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKTVNPYTNGWKL
NPVVGAVYSPEFYAGRVLLCQANQEGSPVYSAPSSLVYTSTMPGFPYPAATAAAAYRGAH
LRGRGRTVYNTFRAAAPPPPIPAYGGVVYQDGFYGADIYGGYAAYRYAQPATATAAAYSD
SYGRVYAADPYHHTLAPAATYGVGAVNAFAPLTDAKTRSHADDVGLVLSSLQASIYRGGY
SRFAPY
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaattcctgcggcagcccagaggacgcggggaagcagcgaggcagagatggcagg
ataagaagggaggatgtggatgattcccagcccgagggaaagaggctgaagctggggaat
gaaggaggaaccgctggaaaggacagggaggcagcaacagaagatgcaataatgccttgc
tcaggcagagaagagcccgtgcccgaaggaggaggtgaaggcaaaagtgactataaatca
gatgctatgactctggtttccagtgccaagaacggtcctcaaggtccagttttgacatcg
ctggatgccagcaaagctgaggaaactccacagaagccccatgcgagtggtgcctattgt
ttccatgagcagagcctcctctcagacactaaagcagagtgcagttctggtgtagaaact
gaggacagaaaaagttcaaaacaacagatgagttgtgaaagagaacagctaaggggtaat
caggaagctacagcacctcctgacacaatggcacagccttatgcctcagcccagttcgct
ccacctcagaacggtatccctgcagaatacacagccccacatccgcatccagctccagac
tacacaggccaaaccactgttccagagcacacgttaaacatgtaccctcctgctcagaca
cactccgaacagagtgcagctgacacaaatgcacaaactgtctccggcacagccacacag
acagatgatgcagcacagaccgatggccagcaacagacacaatcttctgaaaacacagaa
aacaaatcacagccaaaacggctccacgtctcaaatatacctttcagattccgggatcca
gatcttagacaaatgtttggtcaatttggtaaaatcttagatgttgaaattatttttaat
gagcgaggctcaaagggatttggtttcgtaactttcgaaaatagtgctgatgcggacagg
gcgagggagaaattacacggcaccgtggtagagggccgtaaaatcgaggtaaataatgcc
acagcacgtgtaatgacaaataaaaagaccgtcaacccttacacgaatggctggaaatta
aatccagttgttggtgcagtttatagtccagagttctatgcaggcagggtgctgctgtgc
caggcaaaccaggagggatctcccgtgtacagtgcccccagttcactagtatacacatcc
acaatgccaggatttccctaccctgctgcgaccgcagccgccgcgtacagaggtgcccac
ctacgaggccgaggccgcacggtgtacaacacgttccgagcagcagctccccctcctccc
atcccagcctacggcggtgttgtataccaggatggattttatggtgcagacatttatggt
ggttatgctgcctaccggtatgcccagcctgccactgccactgcagctgcctacagtgac
agttacggacgagtttatgctgcagacccctaccaccacacacttgctccagcagccacc
tacggcgttggtgccgtgaatgcttttgcacccttgactgatgccaagactaggagccat
gctgatgatgtcggtctcgttctttcttcattacaggctagtatataccgagggggatac
agccgttttgctccatactaa
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