Passer montanus (Eurasian tree sparrow): 120513584
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Entry
120513584 CDS
T07277
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
pmoa
Passer montanus (Eurasian tree sparrow)
Pathway
pmoa03022
Basal transcription factors
pmoa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pmoa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
120513584
09124 Replication and repair
03420 Nucleotide excision repair
120513584
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmoa03021
]
120513584
03400 DNA repair and recombination proteins [BR:
pmoa03400
]
120513584
Transcription machinery [BR:
pmoa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
120513584
DNA repair and recombination proteins [BR:
pmoa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
120513584
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
IBR
C1_2
VWA_3
HscB_4_cys
Motif
Other DBs
NCBI-GeneID:
120513584
NCBI-ProteinID:
XP_039589086
LinkDB
All DBs
Position
Unknown
AA seq
395 aa
AA seq
DB search
MDDEPERTKRWEGGYERTWEILKEDESGSLKATIEDILFKAKRKRLYEHHGQVRLGMMRH
LYVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGLIVTKSKRAEKMTEL
SGNSKKHVTALKKAVDMNCSGEPSLYNSLNLAMQTLKHMPGHTSREVLVVLSSLTTCDPA
NIYDLIKCLKAVKIRVSVIGLSAEVRVCTVLARETGGTYHVILDESHYKELLMHHVSPPP
ASSTSECSLIRMGFPQHTIASLSDQDAKPSFSMAQLENNSDPGLTLGGYFCPQCRAKYCE
LPVECKICGLTLVSAPHLARSYHHLFPLDAFQEVPLEEYKGERYCQGCQGEMKDQNVYIC
KVCQNAFCVECDVFVHDALHCCPGCIHEHPAPVSV
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgagcccgagcggaccaagcgctgggaaggaggctatgaaaggacatgggaa
attcttaaggaagacgaatccgggtcgttgaaggcaaccatcgaggacattctcttcaag
gcaaagaggaaaagactctatgagcaccatggacaagttcggcttggaatgatgcgtcac
ctttacgtggttgttgatggatcaaggacgatggaggaccaagacttaaaaccgaacaga
cttacttgcactctgaagttactggaatattttgttgaagagtactttgaccagaatcct
attagtcagattggcttaattgtaaccaaaagtaaaagagctgaaaaaatgacggaactc
tcaggaaactcaaaaaagcatgtaactgctctgaagaaagcggtggatatgaattgcagt
ggagagccttctctgtataattccctaaatttggccatgcagactttaaagcacatgcca
ggacatacgagcagagaggttttggtggtcctcagcagtctgacgacatgtgatccagcc
aacatctatgatctaattaagtgtttaaaagcagtaaagatcagagtatctgtcatcggc
ctaagtgctgaagttcgagtttgtacagtacttgcccgagaaactggtggaacataccac
gttattttggatgaaagtcattacaaggagctgctgatgcaccatgtcagtcccccacct
gccagttcaacttctgagtgttcccttattcgaatgggttttcctcagcatactattgct
tctctgtctgatcaagatgcaaagccttcctttagcatggcgcaactggaaaataacagt
gacccaggtcttacactaggtggatatttttgtcctcagtgcagagccaaatactgtgag
cttcctgtggaatgcaaaatctgtggtcttacactagtgtctgcacctcacctggctcgg
tcttaccatcacttgtttcctttagatgcctttcaggaagttccactggaagaatacaaa
ggggaacggtattgtcaaggctgccagggagaaatgaaagatcaaaatgtgtacatatgc
aaagtgtgtcagaatgcattttgtgtggaatgtgatgtgtttgttcatgatgcactgcac
tgctgtcccggctgtattcacgagcaccctgctcctgtatctgtatga
DBGET
integrated database retrieval system
