Pseudomonas monsensis: HV782_026780
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Entry
HV782_026780 CDS
T07539
Name
(GenBank) RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pmoe
Pseudomonas monsensis
Pathway
pmoe02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pmoe00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HV782_026780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmoe03021
]
HV782_026780
Transcription machinery [BR:
pmoe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HV782_026780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
HTH_24
Rv2175c_wHTH
HTH_31
HTH_3
HTH_17
Sigma70_ECF
FaeA
Sigma70_r3
MerR
HTH_11
HTH_29
GerE
PCI
Motif
Other DBs
NCBI-ProteinID:
QXI00092
LinkDB
All DBs
Position
6043567..6044085
Genome browser
AA seq
172 aa
AA seq
DB search
MSSVPSPHSELVGAMYRDHRGWLLAWLRRNVACPQRAEDLSQDTFVRLLGRDGLLTPREP
RAFLLAIAKGLLFDYFRRAALEQAYLTELMLIPEGEQPSVEEQQLILEDLKTIDRLLGTL
STKARAAFLYNRLDGLSHAEIADKLGVSVPRVRQYLAQGIRQCYIALYGEPT
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgtcagtcccaagccctcacagtgaactcgtcggtgcgatgtatcgcgaccatcgc
ggttggctgctggcatggttgcggcgcaatgtggcctgtccgcagcgtgccgaagacctg
agccaggacaccttcgtgcgcctgctcggtcgcgacgggctgctgacgccccgcgaaccc
cgggcgtttctgctggctatcgccaaagggctgttgttcgactacttccgtcgcgccgca
ctggaacaggcctacctcaccgaactgatgctgatccccgaaggcgaacaaccttcggtg
gaagaacagcaactgatcctcgaagacctcaagaccatcgaccgcctgctcggcaccttg
tcgaccaaggcgcgcgccgctttcctgtataaccgcctcgacggcctcagccatgccgag
atcgccgacaagctgggcgtctcggtgccgcgcgtgcggcagtatctggctcaaggcatt
cgtcagtgttacatcgccctgtacggtgagccgacatga
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