Penaeus monodon (black tiger shrimp): 119592618
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Entry
119592618 CDS
T08784
Name
(RefSeq) endoribonuclease Dicer-like
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
pmoo
Penaeus monodon (black tiger shrimp)
Brite
KEGG Orthology (KO) [BR:
pmoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmoo03036
]
119592618
Chromosome and associated proteins [BR:
pmoo03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
119592618
microRNA pathway
RISC loading complex
119592618
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Dicer_platform
Dicer_dsRBD
Ribonucleas_3_3
Dicer_dimer
PAZ
Helicase_C
Dicer_PBD
dsrm
Mdv1
Motif
Other DBs
NCBI-GeneID:
119592618
NCBI-ProteinID:
XP_037797435
EnsemblRapid:
LOC119592618
LinkDB
All DBs
Position
3:complement(16619906..16681062)
Genome browser
AA seq
2473 aa
AA seq
DB search
MMNRVQPENVHSTIFTPREYQVELVDACLKGNTLSVLASRSTRTFLITMVTREMAHLTRS
KEQGGKGQRTLLTGWSGPGLVRAGEAIQQNTNLAVTTYTRLEQVEGWLPSRWSQTFTEAQ
VIIMTVDVLEKGLETGLLQLDMLNLLVITDAHRVATFPPLIKVLNLCRGCRILGMTSPVL
SHACSPPQLESFLTHLQDATSCVVDTSSEIVTVLRYVNKPVEKIVMCRDPDPDERSEVEL
EVRRLVGEALSFLDNHRYDLVEVYGPEYQEFCDDLPDPNKEPRQILMDFLDVLNNLGLWC
ADRAALYALVEVEKLKKKTAYDRHYLLLCMIFTVMARIRAVVEQTFDKYSELDQILKFST
PKVLRLVEILRQVRPLNFVDPRKRRDRLEAFENGKSAAALEGSEDTQENKTSAEDKNVHE
DPTKLATDGGNTENLQGSASKSETEMSCEGSEEPSDTTLCVQGSIYGISEIPLVSSGDGA
NDPNNECEVNSGNAMPDLKAMEELSEGHSQIHGTEPASEDPFLADENSTEDKSELSHGAP
SNMFCGSSVEDSSEVVDISTDGGYFTAVSDVSPKCTSKAVSDSYTNDIEDCMIKANCNNH
EVNVSRMTEVNTENFCAEVIDKHSCLQDSLEDGVDFTKHSMKERSADDMHITVQTCPETT
QYCSNACEDVVAKTNDEDGSALEDSLCRLNIKESSCTDGCDTESIKSCDLHNGVLSAKND
LLDTAMIQNVKNMTLCNGFEHGSKDDIMDSEKDITSKMNGHVDPSEYDSESEDISDRYKS
CESVQSQASVETSSKEGSISDTFVPSATSYLPCKADATSAVDETATPSDSAPNEQELPTC
TSGVENTEDPALVSTSGTTQNTTICSDSAAFSNNSNGTQPATQTVSSEAAAMADTLAMLL
PNSGKGRKRRDDVKEKVKVHNPEDPDSVCGLIFVHHRSMAKIIYRLLKELSDIGGDFAWI
FPQYTVEAKESVKEDPRAAEAEHKKQEEVLRRFRHHECNILVSTRVLEEGIDVPQCNLVL
RFDPPTDYRSYVHSCGRARGHDTFYFHLITKNQEISFLHDMATYSAFQQVLVSHCGSVEV
GTDREVLSSEANAAHAPYLTPAEAAVTMASAIGLLNKYCAKLPSDTFTRLTAMWDVEEIE
EAEVEIPKYKCKIMLPINSPLKGTIEGPWQSKVSLAKMAAALECCRRLHQMGELDDQLQP
VGKESMKLDDHLCAPPADDQVPEGMPRPGTTKRRQYYYKKVAVCLTGEQPKQGLDLFVYK
LDMVLTCPIPDEQNTRGRKIYRPEQSSRSFGIITTKPISQVSGFPVFTRSGEVVVHVQEI
ERKVNVTQDQLSALQYFHKFTFTHVLRLEKYPIKFDPTNARTAFYIVPLNKFNGSEGIDW
EFVKEIQSEGDPRPVPPQDDARKKFQFQHDLYEDAVVMPWYRNQDQPQYFYVAEICTHLN
PQSDFPDAGFETFEKYYLTKYGLQICNLAQPLLDVDHTSGRLNLLTPRHVNRKGVALPTT
SEETKRAKRENLQQKQILVPELCTIHPFPASLWRKAVCLPTILYRINALLLADQLRLSVA
SEVGLGLQTLLPDFSWPPLDFGWSLADVLRKNQENQEQDDKSNIASEATNSKQKATKAEN
SECESPTLAAKKKAPKKGNDMEIGTWSNDMAVDPPTPPFDMDTMNGPDEFEIDTFDPNVA
LPDNLTLLNGFSGADDDVEGELGADWGTGITERRTKSSCNKDSKGGMFRVGSPSNFESDG
WDMFGSSGYNGGYGGYGSYDAYSGYGDFQGLADDLEGCESDVSSDMDDDDKSQTEKLWDE
EGTKRRSSMAADEGSSDEEIDLNWPDEDEEVRNEKEKEFQSFLEDKQKIIKESSCYLAES
ESLLIEKAHRKLQNESKSSPEKVSHRTESSTTEGCEQLSSKGCDNAQQSTSNIIRTVNRD
ETLALTRPDSEVQCSSWYSICEEMSFSFDFQPDLLNHPGPSPSVILQALTMSNANDGVNL
ERLETIGDSFLKYAITTFLYCTYPQRHEGKLSYLRSKQVSNLNLYRLGKRKGLGECMVAT
KFEPHDNWLPPGYFVPRELEEALIDSGVPAGHWNMADLPGLHDLASDEIRRLVQERSEQI
KRSKSEQATSELMATQNPHDLPIFIPYNLLTQHSIPDKSIADCVEALIGAYLTTCGPRGA
LLFMSWLGIKVLPCTLESSPEASELITYGHLESPQSPLYHCPLTDTRKELDLLLSGYQVF
EEKIGYTFRDRSYLLQAFTHASYYKNRLTDCYQRLEFLGDAVLDYLITRHLYEDKRQHSP
GALTDLRSALVNNTIFASLAVKYDYHKYFRHFSPGLDRVIRDFVKMQEENGHKINEEYYF
MEEDECEAAEDIEVPKALGDVFESVAGAIFLDSGSSLDAVWSVYYTMMCREIEQFSGVVP
KSPIRELLEMEPETAKFGKPERLVDGKVRVSVEIFGKGSFSGVGRNYRIAKSTAAKRALR
HLKKLQMMANQGI
NT seq
7422 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaccgggtacaaccagaaaatgttcactccaccatatttactccacgagaatat
caggtggagttggtagatgcctgcctcaaagggaacaccctttcagtgctggcctcccgc
tccacaaggacattcctcatcacaatggtcacacgagaaatggcccatctcacccggagc
aaggagcagggaggcaagggacagcgaacattactcactggttggtcggggccagggctg
gtgcgtgcaggcgaggctattcaacaaaataccaacttagctgtgaccacttacactcgc
cttgagcaggtggaaggctggctaccttcacgatggagtcagacttttacagaggcccag
gtgataattatgactgtggatgtacttgaaaaagggcttgaaacaggattattacagcta
gacatgttgaacctacttgtaattaccgatgcacatcgtgtagcaactttccctccttta
attaaggttttaaatttatgtcgtggatgtaggatccttggcatgacatcaccagtccta
agtcatgcctgttcgccaccacaattagaatccttccttacacaccttcaggatgctaca
tcttgcgtggtagacacttcatcagaaattgtcactgtccttaggtatgtgaataaacca
gttgagaagattgtgatgtgccgtgacccagaccctgatgaacgttcagaagtagaacta
gaagtgcgtaggcttgtgggagaagctcttagttttcttgataatcatcgctatgatttg
gtggaagtctatggtccagaataccaagaattttgtgatgatctgcctgaccccaacaaa
gagccaaggcagatattgatggatttccttgatgtgctcaataatttaggattgtggtgt
gctgaccgtgcagcattgtacgcactagtggaagttgagaagcttaagaaaaaaacagct
tatgacaggcattatcttctgttgtgtatgatcttcactgtcatggcacgtataagagct
gttgttgagcaaacatttgataaatattctgaattagatcagatcttgaaattctcaact
ccaaaggtattgcgcttggtagagatcctccggcaggtccgacctcttaacttcgtagat
ccacggaagagaagagatagattagaagcgtttgagaatgggaaatcagctgctgctctt
gaaggtagtgaggacacacaggaaaacaaaacttcagcagaagataagaatgtacatgaa
gatcctacaaaacttgcaactgatggaggaaacacagaaaatctacaaggatctgcctcc
aaatcggaaactgaaatgagctgtgaaggttcagaagagccaagtgatacaacattatgt
gttcaaggaagcatttatggaatttcagaaattccacttgtaagctcaggagatggtgct
aatgatccaaataatgagtgtgaagtaaacagtggaaatgccatgccagacctcaaagct
atggaagagctgagtgaaggccattctcagatccatggtacagagccagcatcagaagat
cccttcttagctgatgaaaattccacagaagataaatcagaattgtctcatggagctcca
tctaacatgttttgtggatcgtccgttgaagattctagtgaagttgttgacatatccact
gatggaggatattttactgctgtctctgatgtttctccaaaatgtacaagtaaggctgtg
tctgattcgtatacaaatgatatagaagactgtatgattaaagcaaattgtaataaccat
gaagtgaatgtgtcaagaatgactgaagtaaatactgaaaacttctgtgctgaagtaatt
gacaaacatagttgtttacaagatagcttggaagatggagtagacttcactaagcacagt
atgaaagaaagatctgctgatgatatgcacattacagtacaaacttgcccagaaactaca
caatattgttcaaatgcctgtgaagatgtagttgctaagactaatgatgaggatgggtca
gcattagaggacagtttatgtaggcttaatattaaggaatcatcttgcacagatggctgt
gatacagaaagcattaagagctgtgatctacataatggagttctgagtgccaaaaatgat
ttgctagacactgccatgatacaaaatgtgaaaaatatgactctatgcaatggatttgag
catggcagtaaagatgatataatggattctgaaaaagacattacaagtaaaatgaatggc
catgttgatccaagtgaatatgattcagaaagtgaagacattagtgatagatataaaagc
tgtgaatcagtacaaagccaggctagtgtggaaacttccagtaaagaaggctccatatca
gacacatttgttccctctgctacctcttatctgccttgcaaggcagatgctacttctgct
gttgatgaaactgcaactccatctgattctgcaccaaatgaacaggagttacctacttgt
accagtggtgtggaaaacactgaagatcctgctttagtttctacttcagggacaacacag
aacacaaccatttgttctgattctgctgccttttccaataatagtaatggtactcaaccc
gcaacacaaacagtgtcatcagaggcagctgccatggctgatactttggccatgctatta
ccaaatagtggtaaaggacgcaaaagacgagatgatgttaaagaaaaagtaaaggtccac
aatccagaagatcctgattctgtttgtggcctcatttttgtacatcatcgaagcatggcc
aagattatatacaggctattaaaggaactgagcgacattgggggagattttgcttggatt
ttcccccagtacacagtagaagccaaggaaagtgtaaaggaagatcccagggctgcagag
gcagaacacaagaagcaagaggaagtactcaggagattccgacatcacgagtgcaatata
cttgtctcaacacgtgtgttagaagaaggaattgatgttccacagtgtaatctggtacta
aggtttgatcctcccaccgattatcgctcgtatgtccatagctgtggtcgagcaagaggc
catgacactttctattttcacttgattacgaagaaccaggagatcagctttcttcatgac
atggctacctattctgcatttcaacaggtgcttgtaagtcattgtggcagtgttgaagtg
ggcacagacagagaggttctgtcatcagaagccaatgcagctcatgccccttatttaact
ccagctgaagcagctgttacaatggcttcagctatagggctcttaaacaaatactgtgct
aagttaccaagtgacactttcactcgtctaactgctatgtgggatgtagaagaaatagaa
gaggcagaagttgaaataccaaaatacaagtgtaagatcatgttgcccatcaactcacca
ttgaaaggaactattgagggtccatggcaaagcaaagtttcactagctaagatggctgca
gctctagagtgttgtcgaagacttcatcagatgggagagttagacgatcagcttcaacca
gtaggaaaggaaagcatgaagttagatgatcacctgtgtgctccacctgctgatgaccag
gtgccagaggggatgcctcggccaggaacaacaaagaggagacagtattattataaaaag
gttgctgtttgtctgactggggaacaaccaaaacaaggactagatttgtttgtttataaa
ctagatatggtgctaacttgccccatccctgatgaacaaaacactcgtggtcgtaagatt
taccgtccagagcagtcctcacgttcatttggaatcatcacaacaaagccaatctcacag
gtcagtggatttccagtattcactcgttcaggggaagttgttgtccatgttcaagaaatt
gaaagaaaggttaatgtcactcaagatcagttgtcagccttacagtacttccataagttc
accttcacacatgtgctacggctggaaaaatatccaatcaagtttgatcctacaaatgca
agaacagctttttacattgtacctctaaacaagtttaatggaagtgaaggcattgattgg
gagtttgtaaaggagatccaatctgaaggagaccccagaccagtccctccacaggatgat
gcaaggaaaaagtttcagttccagcatgatctctatgaggatgcagtagttatgccttgg
tacagaaatcaagatcagcctcagtatttttatgtagctgaaatttgcactcatctcaat
ccacaaagtgattttccggatgcagggtttgagaccttcgaaaaatactacctaactaaa
tatggccttcaaatatgtaaccttgctcagcctttgcttgatgttgaccacacatctgga
agactgaatctgctcacgccacgtcatgttaataggaaaggagtggcactgcctaccacc
tcagaagaaactaaacgtgccaaacgagagaaccttcaacaaaagcagatcttagtacct
gaattgtgcaccattcatcccttcccagcctccctgtggcgaaaagcagtatgtttgcca
accatcctctatcgtattaatgctttacttcttgctgatcaactaaggctctcagtggca
agtgaagttggattaggactccagactcttctaccagatttctcctggccacctttggac
tttggttggagtttagctgatgttctcaggaaaaaccaggaaaatcaagagcaagatgac
aaatcaaacattgcttcagaagccaccaacagcaagcagaaagctaccaaagctgagaat
tcagaatgtgaatctccaactcttgcagcaaaaaagaaggctcctaagaagggaaatgac
atggaaattggcacatggtcaaatgatatggcagttgatcctccaacacctccatttgat
atggacacaatgaatggaccagatgaatttgaaattgatacattcgatcccaatgtagcc
ctgcctgacaacctgactttactgaatggcttttcaggtgctgatgatgatgtagaaggt
gaattaggggctgactggggcactggcattactgaacgccggaccaagagcagttgcaac
aaagacagcaaaggagggatgtttagagtgggttcaccttcaaattttgagagtgatggc
tgggacatgtttggtagttcaggttataatggtgggtatggaggatatggttcctatgat
gcttatagtggttatggagattttcagggtctggcagatgatcttgaaggctgtgagtct
gatgtttcatctgacatggatgatgatgataaaagtcagacagaaaaactgtgggatgag
gaggggaccaaaaggcggtctagtatggcagctgatgaggggtcatcggatgaagagatt
gacttgaattggccagatgaagatgaagaagtacgaaatgaaaaggaaaaagaatttcag
tcatttttagaggataaacagaagattataaaggaaagttcctgctatctggcagaaagt
gaatcactactaattgaaaaggcacacaggaaactgcagaatgaaagcaagtcatcccca
gagaaggtttctcatcgtactgaaagttctactactgaaggctgtgaacaattatcttca
aaaggctgtgataatgctcaacaatctacctcaaacataattagaactgtgaacagagat
gaaactcttgcacttacaaggccagactctgaggtacagtgttcttcatggtacagcatt
tgtgaggaaatgtcattcagttttgatttccaacctgatcttcttaaccatccaggacca
tcaccaagtgtcatactccaggcactaacaatgtctaatgctaatgatggagtcaattta
gagcggcttgaaaccataggggattcttttctgaaatatgccatcacaaccttcctctat
tgtacttatccacaacgtcatgaaggaaagcttagttacctacgttcaaagcaagtcagt
aacctgaatctctatcgtttaggcaagcgaaaagggcttggagagtgtatggttgccaca
aaatttgagccccatgataactggctgccacccggctactttgttccaagggaattagag
gaagctttgattgactctggggtacctgcaggtcattggaatatggctgacttacctgga
cttcatgacttggcaagtgatgaaattagacggctagttcaggagcgctcagagcagatc
aagcgcagtaagagtgagcaggcaactagtgaactcatggctacacagaatccacatgac
ctgccaatatttatcccatacaatttgctcacacagcacagcatcccagacaaaagtatt
gccgattgtgtagaagccttgattggtgcttacttgactacatgtgggcctcggggtgct
ttactatttatgtcttggcttggaatcaaagtgctaccatgtacattagaaagttctcca
gaagctagtgagcttattacatatgggcacttggaatctcctcagtctccactatatcat
tgccctctcactgacaccagaaaggaactggatttgcttcttagcggataccaagtgttt
gaagaaaagattgggtacacattccgtgatcgttcatacttgttgcaggccttcacacat
gcctcttactacaaaaatcggttgactgactgctatcagaggcttgaatttctaggagat
gctgttcttgattacctgataactcgtcatttgtatgaggacaagaggcaacattcacca
ggtgcactaactgaccttcggtcagcattagtcaataatacaatatttgcatcccttgct
gtcaaatatgactaccataaatacttccgccatttttcacctggtttagaccgagttatc
agggactttgtgaagatgcaagaggaaaatggccataaaatcaatgaggagtactacttc
atggaagaagatgaatgtgaagcagcagaagacatcgaagttcctaaagcccttggtgat
gtatttgagagtgtagcaggtgcaatctttcttgactctggtagctccttggatgcagtg
tggtctgtgtattatactatgatgtgtcgggagatagaacagttcagtggagtggtacca
aagtcacccattagggagttgctagaaatggaaccagaaacagccaaattcggaaagcct
gaacgtcttgttgatgggaaggttagagtgtcagttgaaatatttggaaaagggtcattt
tcaggagttgggaggaattatcgtattgcaaaatcaacagctgctaagagggctctgaga
cacttgaaaaagttacaaatgatggctaatcagggtatctga
DBGET
integrated database retrieval system