Pseudomonas soli: O165_011905
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Entry
O165_011905 CDS
T03276
Name
(GenBank) RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pmos
Pseudomonas soli
Pathway
pmos02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pmos00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
O165_011905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmos03021
]
O165_011905
Transcription machinery [BR:
pmos03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
O165_011905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_20
Sigma70_ECF
GerE
HTH_23
HTH_40
HTH_Tnp_ISL3
HTH_24
HTH_10
HTH_Tnp_4
HTH_38
Motif
Other DBs
NCBI-ProteinID:
AIN58936
UniProt:
A0AA86KE97
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Position
2475185..2475685
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AA seq
166 aa
AA seq
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MSTLDRSALHQLYCENNGWLKSWLRARLGNAADASDLAHDTFLRVMTARNQGPIREARSY
LSAIARALVIDKVRRRAIEQAYLQALALRPEPVEVSPETRLSIIEMLVAVDALLDELGPR
TRDIFLAVQLEGLTYAAVAERFDVSITTVKNHLIRAMTRCLLVVDN
NT seq
501 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgctcgaccgctcggcgcttcaccagctgtactgcgaaaacaacggctggctg
aaaagctggctgcgcgcgcgcctgggcaatgccgccgatgcgtccgacctggcccacgac
accttcctgcgggtgatgactgcccgcaaccagggccccattcgcgaggcgcgcagctac
ctcagcgccattgcccgcgcgctggtgatcgacaaagtcaggcgccgcgccatcgagcag
gcctacctgcaggccctggccctgcgcccggagccggtcgaagtgtcgccggagacgcgc
ctgtcgatcatcgaaatgctggtagcggttgatgcactgctcgacgaactgggccccagg
actcgtgacatcttcctcgcggtgcaactggaagggctgacctacgcggcagtcgccgaa
cgcttcgatgtatcgataaccacagtcaagaaccacctgatccgggccatgacccgctgc
ctgctggtggtcgacaattga
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