KEGG   Pseudomonas soli: O165_011905
Entry
O165_011905       CDS       T03276                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
pmos  Pseudomonas soli
Pathway
pmos02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pmos00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    O165_011905
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pmos03021]
    O165_011905
Transcription machinery [BR:pmos03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     O165_011905
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 HTH_20 Sigma70_ECF GerE HTH_23 HTH_40 HTH_Tnp_ISL3 HTH_24 HTH_10 HTH_Tnp_4 HTH_38
Other DBs
NCBI-ProteinID: AIN58936
UniProt: A0AA86KE97
LinkDB
Position
2475185..2475685
AA seq 166 aa
MSTLDRSALHQLYCENNGWLKSWLRARLGNAADASDLAHDTFLRVMTARNQGPIREARSY
LSAIARALVIDKVRRRAIEQAYLQALALRPEPVEVSPETRLSIIEMLVAVDALLDELGPR
TRDIFLAVQLEGLTYAAVAERFDVSITTVKNHLIRAMTRCLLVVDN
NT seq 501 nt   +upstreamnt  +downstreamnt
atgtcgacgctcgaccgctcggcgcttcaccagctgtactgcgaaaacaacggctggctg
aaaagctggctgcgcgcgcgcctgggcaatgccgccgatgcgtccgacctggcccacgac
accttcctgcgggtgatgactgcccgcaaccagggccccattcgcgaggcgcgcagctac
ctcagcgccattgcccgcgcgctggtgatcgacaaagtcaggcgccgcgccatcgagcag
gcctacctgcaggccctggccctgcgcccggagccggtcgaagtgtcgccggagacgcgc
ctgtcgatcatcgaaatgctggtagcggttgatgcactgctcgacgaactgggccccagg
actcgtgacatcttcctcgcggtgcaactggaagggctgacctacgcggcagtcgccgaa
cgcttcgatgtatcgataaccacagtcaagaaccacctgatccgggccatgacccgctgc
ctgctggtggtcgacaattga

DBGET integrated database retrieval system