Petromyzon marinus (sea lamprey): 116937077 Help Entry 116937077         CDS       T09614                                  Name (RefSeq) protocadherin Fat 1-like   KO K16506   protocadherin Fat 1/2/3 Organism pmrn  Petromyzon marinus (sea lamprey) Brite KEGG Orthology (KO) [BR:pmrn00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:pmrn04147]     116937077    04515 Cell adhesion molecules [BR:pmrn04515]     116937077 Exosome [BR:pmrn04147]  Exosomal proteins   Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)    116937077 Cell adhesion molecules [BR:pmrn04515]  Cadherins   Cadherin related    116937077 BRITE hierarchy Motif Pfam:  Cadherin Cadherin_2 Cadherin_pro TerD Motif Other DBs NCBI-GeneID:  116937077 NCBI-ProteinID:  XP_032800089 EnsemblRapid:  ENSPMAG00000019710 LinkDB All DBs Position Unknown AA seq 3119 aa AA seqDB search MLQDEEDPYPIGSTERTRRLSRHPPFRPLLGVVIVVIASRVQTMTPNKMASVLLPLLLLP PCGGQPEPPLARYFYNATVYENSAPRTYVESHSRMGFYIGLWGFIPTYSIVSGDEGAGFT AEGLHLGETLILRIRTGNVPLNREERPGYVLGIRAVTWSRRCLAFITVYVRVMDRNEFSP LFSMSSYGTRDLKAPASTVGLFVTDDAPAGTVVVRVAATDADEGPNGRIRYALANRVFAV HPTSGAVMLVKRLKPDDWGIYILKVLAVDSGGLSSSAHITVSVCLTNHDSPRIAVVATRE PRASFANPAASYAELAVKDADIGPAGEISAVEIIAGDPLRAFSVTLTDGADPDSTYAVRL SGRLDWADFPFGVNLTVQARDRGRPPNYSGPVTVTVREGGAAGAFERSVYTGAVERRSPP RTVVLAVRASCGARSCRYVVRGGADGDFFAVNPATGVVSVRKSLAAVDRPRLAFDVGTDV GSGIASVTIDVVYYNDHAPVFERHNYFASLREDVPAGTFVLVVYATDKDEGYDGRVTYGL ADSDPGPFAVDPFTGIVVTTGPLDHEETAGVYWLHVRASDWGTPFRREAEVIVTVRVVNV NDNAPVFVRNCVGQIPRDLRPGEPIFTALAIDAELQPVLYGIASGNEGGFFALDDALGVV TLARSLADVAVGPVGAFHLGLTATDGELSAEMFLNISVLDASPGSGPSLRCVATGIVRRM AEILHRADQQRDRPRPVAASTVNRHAPAFATPAAAVEVREDLPVGAEVIRMEAEDSDDGF EGKLLYALTDDGASGFTVDAETGIVRVLVPLDREAAASYSMNVVVHDLGTPRRSASATLR VVVLDVNDNRPEFSRRAYAARVPERVRPGHELLRLEAADGDEGDAGSVRYRLLSDTDLFR VDAETGALEVAAPLDRERRAEHALLVEASDLAPEESRLSSVAAVIVTVDDVNDHAPTCAP NPLRLRVPEDVTVGAVLGWLDARDPDVGPAGEVHYTLVSVDGGDGTFTVHRTSGAVRLAR PLDFERRRRYDLKVAAHDSDPRGPPSTICRATVEVTDVDENNHAPRFADSMDSTRVPEDV PMETAIFTATATDHDEGLDGEVRYSLVGGSDLGVFNIHVETGVIVTTRPLDRETVRSYWL EVRATDRGVFQRFSTLHIYVEVQTWYQADAMENSHSVIFQVKAWDPDKDSVPRGKGLTFN IVSGDPQGMFTINKTSGAISNVPNKSLDRETQAEYELEVSIVDTGVPPRETRVALSVNVL DRNDHTPRFPRDLQHVYVVVADDETEVEIARFYATDADSGDNARIAYDISPQIKYRVDSY QGIGILFTRRNLHRAGTSDTMELTAMNMDLDARKVSTKLRVNWVATPLPPETPPAFAQSR HVVTVAETATVGSVVIALPTQSTAGSLLWFNITGGNVEDRFYVTQHGGVVELAQPLDAEQ RTSYELTIRLTDGTNAATTLVEVTVLDVNDNRPRFSRGRYNATVAEDSPGAVVSLRMEAT DADAGDAGQLSFSLVGLGGNNAAESVRLFRINPVTGKVTAAVALDREAKQSHVLTVMCYI FTQRSSQSCDIRRQLVSARGALCSPSSSAGHTALSSVHCSMKAGTAWIGHTLAPTSTIDA RAAGRTTFLTLYMPSLVQDARIPVRRAYTTVVVSVIDGNDNWPLFNSYPYEAYVAESAAV GSAVIRVVAFDCDDGPNANFSYSFKSGNVGNSFAVHHTLGVVSVARKLDGSVVESYELMV RAKDHGRPQRSTVATVRIVVNAYGVPPKFAFGDGGGSAEVAEWAAPGSFVLAVSASSWST VTYEIREGDSEGAFDIHPTSGVVATKRPLDRERTPSYRLTVRATDAAGLSTDTSVSIRVL DENENAPVFDRPRYRGAVSEEASAGTLVLDPDGVPLVIRAADADDGEGPATVAYQIVERE ARKYFSVDPRTGAVRTAGALDRETTAEFRFRVAASDGGSPRLSAETPAEVTVTVLDANDC PPAFSTAAYETALIVPTLAGVRLLTLAASDLDVGAVLTYRVASGNVGGAFAVDARTGNVV VRNASLLAAGYDLRVEVSDGRFSSAARVKVSVLEAVDGRLRVPPKYSARVPENSTAIVVV AVVVATGGDLNEPLVFGLLDPSGAFRMRPTAGVLETAGVALDREERDRYELLVDVRDGSR ARPSVAHTVVEVDVEDVNDNAPAFVGLPYRAVVRVAAAWGSAVLTVAALDRDVGENARVR YSLRDGHDGRFVIDRSGGNVSLRRRFAPDASGKDFVVTVVATDCGVPPLSSAVDVTVTVL DEDAPAFESLSHVAWVPEDVVPPAPIAHVRATAPGGPPLVFSIVDGDPFDQFSVDFGTGV VSVVGPLDRETRANYRLAVRAASPATGLYADTSLDVVVGDVNDNRPLFARGAYAATLSEF APPGTSVVQARAADADSGSNRALRYEIVDDGEKGGEGFHVDPDGGLVVTTAPLDHERSRL HRFSVRATDGGSPPLAAYVPVTVTVEDENDNAPVFERPLYEASVNRLVLAGHFVAAPRAF DADASDAHRLRYAIVSPSRDDIRESYRDIETSFAIDVETGVVSVIGDSLRLGLGKLPALY RFRVSVTDGTFVSVATVAVDLLPAFEWPKYAMEIPENSEAGTPVVLRRAMDADASGRILG RAPPAEVIFATGYANDRPPRFLDSVVYVRVPEDAEPGLALAVIRADDADATSEHLRLTYH LTGGDPLGHFSLGPVNMGGEWTLRLERPLDREEKEYHILQVTATDCTYARTVVVVVIVLD VNDNDPVCDKLWYNVTVLEDVAPGFFMLSVSARDSDLGPNGTVRYSLHDAGATPFRLHLV SGKLFTRAPLDHEAAPVHALTVVANDRGGRSCRAEVLVRVEDMDDSAPRFLAGSPPRAVA LRWRHAGVGTAVTSARAVDSELGRRRRVTHFLLDSAGYRFAIDVRSGLIVVKRPLERRAL YNLTVLARAGGGGSAPSATAAISVSLRDDDDVATPAFRRPAYRVTVPEDAAPGTTVVTVA ATFGGAGAPSYGIASGNELGAFGIDRRLGVISVVARALDYDKRRHHYLTVWAAAASDGDG DDAGGAATSPSAVTVVTVDVTDEPRFAAKSAVVGEEDALPGDAIVTSGAAGDASSEEEE NT seq 9360 nt NT seq  +upstreamnt  +downstreamnt atgttacaggatgaggaggacccataccctattgggagcaccgaacggacccggagactt tcgcggcacccgcctttccgaccgctgctcggtgtcgtcattgtcgtcattgcctctcga gtgcagaccatgacgcccaacaagatggcttcggtgctcctcccgctgctgctgctgccg ccgtgcggcggccagccggagccgcccttagccagatatttctacaatgccaccgtctac gaaaactccgcgcccaggacgtatgtggagagccacagcagaatggggttctacatcggc ctctggggcttcatacccacgtactccatcgtatccggggatgagggggccgggttcacg gcagaggggttgcacttgggtgagactttaatcttgcgcatccgcacggggaatgtgccg ttgaaccgcgaggagcgccccggctacgtactggggataagggcggtcacctggagccgc cgttgtctggcgttcatcacggtctacgtccgggtgatggaccgcaacgaattcagcccg ctgttctcgatgtcatcgtacggcacgagagacttaaaagcgccggcgagcaccgtcggc ctcttcgtcaccgacgacgcgccggcgggcaccgtcgtcgttcgcgtcgccgccacggac gctgacgagggccccaacgggcgcatccgttacgccctggcaaatcgcgtgttcgccgtg cacccgacgagcggcgctgtgatgctcgtcaagaggctgaagcccgatgattgggggata tacatattgaaggtgcttgctgtcgacagcggtggcctgtccagctcggcgcacatcacg gtgtccgtgtgcttgacaaaccacgactccccgcgtattgccgtcgtcgcgacccgcgag ccgcgggcgtcatttgctaaccccgccgcctcgtacgccgagctcgccgtgaaggacgcc gatatcggccccgcgggggagatcagcgccgtggagatcatcgccggcgaccccctccgg gcgttctccgtcaccctgacggacggagccgaccccgactcgacctacgcggtgaggctc tcggggcggctagactgggcggacttccccttcggggtgaacctcaccgtgcaagctcgc gacagggggaggccgcccaattactcggggcccgtcacggtcacggtccgggagggcggc gccgccggcgcgttcgagcggagcgtctacacaggtgccgtcgagcggcggtctccgccc cgcaccgtcgtgctcgcggtcagagcctcttgcggcgcgcggagctgccggtacgttgtc cgaggtggcgccgacggcgacttcttcgccgtgaaccccgccaccggggtcgtctccgtc cgcaagtctctggcggcggtcgacagaccccgcctcgcgttcgacgtcggtaccgacgtc ggctcgggcatcgccagcgtcacgattgacgtcgtgtactacaacgaccacgccccggtc ttcgagcggcacaactacttcgcctcgttgagggaggacgtcccggcgggcacctttgtg ctcgtcgtgtacgccacggacaaggacgaggggtacgacggccgcgtgacgtatggcctg gcggactctgaccccggcccattcgccgttgaccccttcacgggcatcgtcgtcacgacg gggccgctggaccacgaggagacggcgggggtctactggctgcacgtgcgagcctcggac tgggggactccgttccgccgggaggcggaggtgatcgtgactgtccgcgtcgtcaacgtg aacgacaatgcgcccgtctttgtgaggaactgcgtgggtcagatcccccgggacctccgg cctggcgagccgatcttcaccgcattggccatcgacgccgagctccagccggtgctctac ggcatcgcgtccgggaacgagggcggcttcttcgcgctcgacgacgccctcggcgtcgtg acgctcgcgcgttccctcgccgacgtcgccgtcgggccggtgggggcctttcacctcggc ctcacggccaccgacggggagctctcggcagagatgttcctgaacatctcggtcctggac gccagtcccggttcggggccgtcattgcggtgcgtggcgacggggattgtccggaggatg gccgagattctccaccgggcggaccaacagcgagaccgcccgcggcctgtcgccgccagc accgtcaatcggcacgcgccggcgttcgccaccccggcggccgccgtggaagtccgcgag gacctgcccgtcggggcagaggtcatccgaatggaggccgaggattcggacgacggcttc gaggggaagctgctatacgccctgacggacgacggggcgagcggcttcaccgtggacgca gagactggcatcgtgagggtcctggtgccgcttgaccgcgaggccgccgcctcctactcc atgaacgtcgtcgtccacgacctggggacgccgcggcgttctgcgagcgccaccctccgg gtcgtcgtcttggacgtcaacgacaaccggccggagttctcgcggcgcgcctacgcagcc cgggtgccggagagagtgcggccgggccacgagctgctccggctggaggccgccgacggc gacgagggcgacgcgggctccgtgcgctaccgcctgctgtccgacaccgacctcttccgc gtggacgccgagacaggcgccttggaggtggcggcgccgctggaccgcgagcggcgcgcc gagcacgcgctgctggtggaggcgtcggacctggcgccggaagagagccgcctctcttcc gtcgccgcggtgatcgtgacggtggatgatgtgaacgaccacgcgcccacgtgcgcgccg aaccccctccgcctccgtgtgcccgaagacgtcacggtgggggccgtcctcggctggctg gacgctcgagaccccgacgtggggccggccggggaggtgcactacacgctggttagcgtg gacgggggggacggcacgttcacggtgcacaggacgagcggggcagtgcggctggcgcgg ccgctcgacttcgagagacgacgccgctacgacctaaaggtggccgcgcacgacagcgac cccagggggccaccgtcgaccatctgccgggcgacggtggaagtgacggacgtggacgag aacaaccacgccccgcggttcgcggattccatggacagcacacgcgtgccggaggacgtc cccatggagaccgccatcttcaccgccacggccacggaccacgatgagggtctggacggg gaggtgcggtactccctcgtgggcggatccgacctgggggtcttcaacattcatgtggag accggggtgattgtcacgacgcggccgctggatcgcgagacggtgaggagctactggctc gaagtgcgcgctacggatcgcggagtcttccaacgcttctccacactgcacatctacgtg gaggtgcagacgtggtaccaggccgacgctatggagaactctcattccgttatattccaa gtgaaagcctgggacccagacaaggacagcgtgccccggggcaagggcctcacgttcaac atcgttagtggagacccacagggaatgttcaccataaacaaaacgtcaggcgccatatct aacgtccccaacaagtcgctggacagagagacgcaggcggagtacgagctggaggtgtcc atcgtggataccggcgtgcccccgcgtgaaacgagggtggcgttgtcggtgaacgtcttg gacagaaacgaccacaccccacgcttccccagggacctccagcacgtctacgtggtggtg gcggatgacgaaacggaggtggaaatcgcacgtttctatgccaccgatgccgactcgggc gacaacgccaggatagcgtacgacatatcgccacaaataaaatatcgcgtggacagctat caaggaatcggaatcctcttcacccggagaaacttgcaccgtgcggggacatccgacacc atggagctcaccgccatgaacatggatttggacgcaagaaaggtgtctaccaaactgcgt gtgaattgggtcgccactcctctgccgccggagacgcccccggccttcgcccagagtcgg cacgtggtcaccgtggcggagacggccaccgtgggctccgtggtgatcgccctgcccacg cagagcacggcggggagcctcctctggttcaacatcacaggcggtaacgtggaggaccgc ttctatgtgacgcaacatggcggtgttgtggagttggcccagccgctggatgccgagcag cgcacctcctacgagctcaccatcaggctcaccgacgggaccaacgctgcaaccaccctg gtggaggtgacggtgctggacgtgaacgacaaccggccccgtttctcccgtggccgctac aatgcgaccgtcgccgaggactctcctggcgccgtcgtcagcctccggatggaggcgacc gacgccgacgccggcgacgccggccagttatccttctcgctcgttggcttaggcggcaat aacgccgccgagagcgtgcgtctgttccgcattaaccccgtcaccggcaaggtcacagct gccgtggcgctggaccgagaggccaagcagagccacgtactcaccgtcatgtgctacatc ttcacccagcgctcctcgcagtcctgtgacatccgacggcagctcgtatctgcacgcgga gctctctgctctccgtcttcttccgccggtcacacggccttgtccagcgtccactgctcc atgaaggccggcacggcgtggatcggccacaccctggcaccgaccagcacgatagatgct cgggctgctggccggaccaccttcctcaccctgtatatgccgagcttggtgcaggatgcc aggatccccgtgaggcgagcgtacaccacggtggtggtgagcgtcatcgatggcaacgac aactggcccctcttcaacagctacccctacgaggcctacgtggcggagtcggcggccgtg ggctccgccgtgatacgcgtcgtggcgttcgactgcgacgacggccccaacgccaacttc agctacagcttcaaatccggaaacgtggggaattcctttgccgtccaccacacgctgggc gtcgtctccgtggcgcggaagctggacggttccgtggtggagagctacgagctgatggtg agggcgaaggaccacgggcgcccgcaacgctccacggtcgccaccgtccgcatcgtcgtc aacgcgtacggcgttccccccaaattcgccttcggagacggcggcggctcggcggaggtc gccgaatgggccgcgcccgggagcttcgtgctcgcggtgagcgcctccagctggtcgacg gtcacctatgaaatacgggagggcgattccgaaggcgccttcgacatccacccgacgtcc ggggtcgttgccaccaaacggccgctggaccgcgagcggacgccgtcgtaccggctgacg gtgcgggccacggacgcggcgggcctctcgacggacacgtcggtgtcgatccgcgtgctc gacgagaacgagaacgcgcccgtcttcgaccgcccgcgctatcgcggggccgtcagcgag gaggcgtcggcgggaaccctggtactggaccccgacggcgtcccgctcgtcatacgagcc gccgacgcggacgacggcgaggggcccgcgacggtcgcctatcagatcgtcgagcgcgaa gccagaaagtacttctccgtcgacccgcgcacgggggccgtcaggacggccggggccctc gaccgcgagacgacggccgagttccgcttccgggtggccgcatcggacggcggcagcccg aggctgtccgccgaaacgccggccgaggtgaccgtcaccgtgctggacgccaacgactgc ccgccggcgttctcgacggccgcgtatgagacggcgctgatcgtgccgaccctcgccggc gtccgcctgctgaccctggcggcctccgacctggacgtcggcgccgtgttgacctaccgc gtcgcctcgggaaacgtcggcggtgcgttcgccgtcgacgcgcgcaccgggaacgtcgtg gtgcggaacgcctccctcctcgccgccggctacgacctgcgggtcgaggtgtccgacggg aggttctcgagcgccgcgcgggtgaaggtctccgtgctggaggcggtcgacggcaggctg cgggttccgccaaagtactcggcgcgcgtccccgagaacagcacggcgatcgtcgtagtc gccgtggtcgtcgcgacggggggagatctcaacgagccgctcgtcttcggcttgctcgac ccgagcggcgcgttccggatgaggccgacggcgggcgtcctggagacggccggcgtcgcg ttagacagggaggagcgcgatcgctacgagctgctggtggatgtgagggacggctcccgg gcgcgcccgagcgtcgctcacaccgtggtcgaggtggacgtcgaagacgtcaatgacaac gccccggcgttcgtcggcctgccgtaccgcgccgtcgttagggtggcggcggcttggggg agcgccgtgctcaccgtggcggccctcgaccgggacgtcggcgagaacgccagggtgagg tactccttgagggatggccacgatggccgcttcgtcatcgatcgctccggcggcaacgtc tcgctaaggaggagattcgccccggacgcgtcgggcaaggacttcgtcgtgaccgtggtg gcgacggattgcggggttcctccgctgtcgtccgcggtcgacgtcacggtcacggtgctc gacgaggacgcgccggcgttcgagagcctctcccacgtcgcgtgggtgcccgaggacgtc gtgccgcccgcgccgatcgctcacgtccgcgcaacggctccggggggcccgcctctcgtt ttctccattgtcgacggcgaccccttcgaccagttctccgtcgacttcggcacgggcgtc gtgagcgtcgtcggccctctggaccgcgagacgcgggccaactaccgcctcgcggtgcgg gccgcatccccggcgacgggcctgtacgccgacacgagcctggacgtcgtcgtcggggac gtcaacgacaaccggccgctcttcgcgcggggcgcttacgccgccacgctgtccgaattc gcgcccccggggacctccgtcgtccaggcgagagccgccgacgccgactcgggctccaac cgggcgctccgctacgagatcgtggacgacggggagaagggcggcgagggattccacgtg gacccggacggcgggctggtcgtgacaacggcgcccctggatcacgagcgaagccggctt catcgtttctcggtgcgggcgacggacggcggctcccctcccctcgccgcctacgttccg gtgaccgtcaccgtcgaggacgagaacgacaacgccccggtgttcgagcggccgctgtac gaggcgtccgtgaaccggctggtcttggccgggcacttcgtggccgcgccgagggcgttt gacgccgacgcgtcggacgcccaccggctccgatacgccattgtctccccctccagggac gacattcgtgaatcatatcgcgacatcgagaccagcttcgcgatcgacgtcgagacaggc gtcgtctccgtcatcggcgacagcctgcgattaggcctcggcaagctgcccgccctctac cgcttccgggtctcggtcacggacggaacgttcgtcagcgtagccacggtggcggtcgac ttgctgcccgccttcgagtggcccaagtacgcgatggagatccccgaaaactcagaggca gggaccccggtggtcttgcggcgggccatggacgccgacgcgagcgggcgcatcttaggg agggcgccccccgccgaggtgatcttcgccacgggctacgccaacgaccgccccccgcgg ttcttggactcggtggtctacgtccgcgtgccggaggacgcggagcccggcctggcgttg gccgtcatccgggcggacgacgcggacgccacgtcagaacacctgcggcttacgtaccac ctgacgggcggcgacccgctgggccacttctccctcggccccgtcaacatggggggcgag tggacgctgcgcctggagcggccgctcgaccgcgaggagaaggagtaccacatcttgcag gtgacagccacggactgcacctacgcgaggacggtcgtcgtggtcgtcattgtgctggac gtcaatgacaatgaccccgtgtgtgacaagctgtggtacaacgtcaccgtgctggaggat gtcgcgccaggattcttcatgctgagcgtttccgcccgtgactccgacctcggccctaac ggcaccgtcagatactcgctgcacgacgccggagcaacgcccttccgcttgcacctcgtc agcgggaagctctttacgcgggcgccgctggaccacgaggccgccccggtccacgcgctc accgtggtcgcgaacgaccggggcggccgctcctgccgggcggaggtcctcgtgagggtg gaggacatggacgactcggccccgcgcttcctcgcggggtcgcccccccgtgccgtcgcc ctgcgttggcgccacgccggcgtggggacggcggtgacgagcgcgcgcgccgtcgactcc gaactgggccgccgccgcagggtgactcactttctgctggactcggccggctaccgcttc gccatcgatgtccgttcgggcctcatcgtcgtcaagcgtccgctggagcgccgtgccctc tacaacctcacggtgctcgcccgcgccgggggggggggctcggcgccttccgccaccgcg gcgatttccgtgtccctccgtgacgacgatgacgtcgccaccccggcgttccggcggccg gcttaccgcgtcaccgtgccggaggacgcggcgccgggcaccacggtcgtcaccgtggcg gccaccttcggcggggcgggcgcgccgagctatggcatcgccagcggcaacgagctcggg gcgttcgggatcgaccggaggctcggcgtcataagcgtcgtggcgagggccctggactac gacaagcgccgccaccactacctgacggtgtgggccgccgccgccagcgacggcgacggc gacgacgccggaggggcggcgacctcgccgagcgccgttaccgtggtgaccgtggacgtc accgacgaaccgcggttcgccgcgaagagcgccgtcgtcggggaggaggacgccctgcct ggtgacgccatcgtcacgagcggagcagccggcgacgccagcagcgaggaggaggagtag

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