Petromyzon marinus (sea lamprey): 116942492
Help
Entry
116942492 CDS
T09614
Name
(RefSeq) plexin-A1-like
KO
K06820
plexin A
Organism
pmrn
Petromyzon marinus (sea lamprey)
Motif
Pfam:
Plexin_cytopl
Plexin_RBD
TIG
TIG_2
PSI
Sema
TIG_plexin
RasGAP
PSI_integrin
Motif
Other DBs
NCBI-GeneID:
116942492
NCBI-ProteinID:
XP_032810383
EnsemblRapid:
ENSPMAG00000045292
LinkDB
All DBs
Position
14:14907889..15070663
Genome browser
AA seq
1987 aa
AA seq
DB search
MTPPHPLLRVSASNPALGNNRRQLCHGRRDRHSRHRRPPPLTHLLLALLPLLLLPPLAPA
SRGSRQPSGEDGGDGGGGGAARFATPNKNWPLNHLVVDGGTGKVYVGGVNRVYQLSSNLT
LLRDHETGPVMDNRECYPPPMVQQCNQESAPSDNVNRLLLVDARRSRLLACGSAFQGVCK
LLKLDDLFKLGEPAHKSEHYLSSVSERGSSVGFIVDPPRRPPRIDGGDDGDYDDKDEEDE
DDEEGSVLFVGTPVDGKVDYFPTISSRWLKRDAEDANMFAYVYHNDFESSQMKIPSDTLS
MFPNFDIFYVYGFSSGDFAYFLTVHPDTQPLSADAPAERFFTSKVVRLCLHDRHFYSYVE
LPIGCSKGGVDYLMVQAAYLARPGRRLAESLGISPNEKVLYAVFLKDQKGRRRPPGGESA
LCVFPLRAIDEAIKERVQSCYQGKGTLQLSWHINRLISCTASTINITDRFCGLNLNQPLG
GDTIITGVPLFSDDRDAMSSVTAYVYKDYAVAFVGTASGNLKKLRVDGRPEGARQYEVVP
VVPGSLVLRDMAFTVDERFIYVLSEGQVTRVPVEMCEQYTSCGSCLGSGDPHCGWCVLHS
KCSRKDRCPRSSEPRRFAVDVAQCVRLTVRPTNISVSVSSVQLTIRAENVPELLAGVNCT
FEGAAETPGEVYGSRVRCLSPSARDVTHLLRNVTGDRRVMRLGLKSLGTGVPFASTSLIF
YNCSKHVSCLACVSSSFPCHWCKFRHVCTDHPGSCSFLEGRVNVSEECPQLLAPSADVLI
PAGVVRHVTLAARNLPQPQSGQRGYECVLTLGGREERVPALRFNSSSVQCQEIAYAYDED
VGDVLVDFSVVWNGDFVIDNPADIKVHLYKCSAARDSCGLCLKADARFECGWCKGEERCT
LRRHCAAPDLHWLHRGLPLARCAHPRITEVSPLTGPREGGTLVTIRGENLGLSYSEIGRH
GMVMVAGVACQPLRDLYIPAEQIVCRMARADGRHQVRGHAHICVEECVAQYMALSKQVYT
FVQPAVRTVAPARGPVSGGTRVSVHGAHLDAGSAVRVALGNESCVLRSRSAGEIVCTSAW
APRGPDVVAVSVSLDGAELSTALRYEYTEDPVVTRIEPEWSITHGGTLLTVTGSNLGTVQ
EPKMRAKYKGVESVDTCTVFNETTLICRAPGIQFNSPGPLPAESGDGTSSSSSSSASSSS
SAASLPMLAPVRPDELGFIFDDVRSLLVFNGSEFYYHASPTFEPLGHDPLDIKPGSPIIL
KGRNLMPGPAGGRLNYTVLMGDVACAVTVSDTQLLCECPALSGHHMLTVRVGSLEQAVGR
VRLAHDSLLTLPAIVGLTAGGGLLLLVVVGVLVAYKRKSRESDLTLKRLQLQMDNLESRV
ALECKEAFAELQTDINELTSDVDGAGIPFLDYRTYALRVLFPGIDNHPVLTVLEVPGNRH
ECVEKGLRHFGTLLGSKVFLLAFVRTLESQRAFSMRDRGNVASLVATALQGKMEYATDVL
KQLLSDLITRNIESRNHPKLLLRRTESVAEKMLTNWFTFLLHKYLKECAGEPLFMLYCAI
KQQMEKGPIDAITGEARYSLSEDKLIRQQIDYRTLTLNCVTPESEKNVEVSVKVLDCDTI
TQVKEKLLDAVHKNVPYSQRPKAIDRDLEWRQGRMGRVILQDEDVTTKIENDWKQLNTLA
HYQVADASTVALVPKQTASYNAANSLLSRSVNKYESIMRHPGSPDSLRSRTPMITPDLES
GTKLWHLVKNHDHADQKEGDRGNKMVSEIYLTRLLATKGTLQKFVDDLFETIFSTAHRGS
ALPLAIKYMFDFLDEQADRHAIHDPAVRHTWKSNCLPLRFWVNVIKNPQFVFDIHKTSIT
DACLSVVAQTFMDSCSTSEHRLGKDSPSNKLLYAKDIPNYKHWVERYYTDIGKMPAISDQ
DMNAYLAEQSRMHSSDFNTMSALNELYLYVSKYKDEILAALDQDEQAKRHRLAFKLDQVI
SCMSGDS
NT seq
5964 nt
NT seq
+upstream
nt +downstream
nt
atgactcctcctcaccccctcctccgcgtctccgcctccaacccggcgctcggcaacaac
cgtcgccaactctgccacggccgccgcgatcgccacagccgccaccgccggccgccgccg
cttacgcacctgctgctcgcgctgctgccgctgctgctgctgccgccgctggcgccggca
tcgcgcggctcccgccagccctccggcgaggacggaggtgacggcggcggcggtggcgcc
gccagattcgcgacgcccaacaagaactggccgctgaaccacctggttgtcgacggcggc
acgggcaaggtgtacgtgggtggcgtcaaccgcgtgtaccagctgtcgagcaacctgacc
ctgctgcgcgaccacgaaacgggccccgtgatggacaaccgcgaatgctacccgccgccg
atggtgcagcagtgcaaccaggagtcggcgcccagcgacaacgtcaacaggctgctgctg
gtggacgcgcggcgctcgcgcctgctggcgtgcggcagcgccttccagggggtgtgcaag
ctgctcaagctggacgacctcttcaagctgggcgagccggcgcacaagtcagagcactac
ctgtcgagcgtcagcgagcgcggctcgtccgtcgggttcatcgtcgacccgccgaggcgc
ccgccccggatcgacggtggcgacgacggggactacgatgataaagacgaggaggacgag
gacgatgaggagggcagcgtgctgtttgttggcacgccggtcgacggcaaggtggactac
ttcccgacgatctcgagccgctggctgaagcgcgacgcggaggacgccaacatgttcgcg
tacgtctaccacaacgatttcgagtcgtcgcagatgaagatcccgtccgacacgctctcc
atgttccccaacttcgacatcttctacgtgtacggcttctccagcggagacttcgcctac
ttcctcaccgtgcaccccgacacgcagccgctgtccgccgacgcgccggccgaacgcttc
ttcacctccaaggtggtgcgcctgtgcctgcacgaccgccacttctactcctacgtcgag
ctgcccatcggctgctccaagggcggcgtcgactacctcatggtgcaggcggcctacctg
gcgaggccgggccgtcggctggccgagtcgctgggcatctcgccgaacgagaaggtcctc
tacgccgtcttcctcaaggaccagaagggccggcgcaggccgccgggcggcgagtcggcg
ctctgcgtcttcccgctgcgcgccatcgacgaggccatcaaggagcgcgtgcagtcgtgc
taccagggcaagggcaccctgcagctctcgtggcacatcaaccgcctcatatcctgcact
gcctcgacgatcaacatcaccgaccgcttctgcggcctcaacttgaaccagccgctggga
ggcgacacgatcatcacgggcgtgccgctcttctcggacgaccgcgacgccatgagctcc
gtcacggcctacgtctacaaggactatgccgtagcgttcgtcggcaccgcctcggggaac
ctcaagaagctgcgcgtggatgggcggcccgagggcgcacgccagtacgaggtggtgccc
gtggtgccgggcagcctggtgctgcgggacatggccttcactgtggacgagcgcttcatc
tacgtgctctccgagggccaggtgacgcgggtgccggtggagatgtgcgagcagtacacc
agctgcgggagctgcctggggtcgggggaccctcactgcgggtggtgcgtgctgcacagc
aagtgctcgaggaaggaccgctgtccccgctccagcgagccgcggcggttcgctgtggac
gtggcgcagtgcgtgcggctcaccgtgaggcccaccaacatctcggtcagcgtgtccagc
gtgcagctcacgatccgggctgagaacgtcccggagctgctggccggagtgaactgcacg
tttgagggagcggccgagacgccgggggaggtctacggctcccgcgtacgctgcttgtcg
ccctcggcacgcgacgtcacgcacctcctgcgcaacgtcacgggagatcgccgcgtcatg
agactcggactcaagtctctggggaccggagtgccgtttgccagcaccagcctcatcttc
tacaactgcagcaagcatgtgtcctgcctggcgtgcgtgagcagctccttcccgtgccac
tggtgcaagttccgccacgtgtgcacggaccacccgggcagctgctccttcctcgagggc
agagtgaacgtctccgaggagtgcccgcagctgctggcgccctccgcggacgtgctcatc
ccggccggcgtggtgcggcacgtgacgctggcggcgcggaacctgccccagccgcagtcg
ggccagcgcggctacgagtgcgtgctgacgctgggcgggcgcgaggagcgcgtgccggcg
ctgcgcttcaacagctccagcgtgcagtgccaggagatcgcgtatgcgtacgacgaggac
gtgggtgacgttctcgtcgacttctccgtcgtttggaatggagatttcgtcatcgacaac
ccggccgacatcaaggtgcacctgtacaagtgctcggccgcgcgcgacagctgcggcctg
tgcctgaaggccgacgcacgcttcgagtgcggctggtgcaagggcgaggagcgctgcacc
ctacgccggcactgcgccgcgcccgacctgcactggctgcaccgcggcctgcccctcgcg
cgctgcgcccacccgcgcatcaccgaggtgagccctctgacagggcctcgcgagggcggc
acgctggtgacgatacgcggggagaacctgggcctgagctactcggagatcggccgccac
ggcatggtgatggtggcaggggtggcctgccaaccgctgcgggacctctacatccccgca
gagcagatcgtgtgccggatggcacgcgccgacgggcggcaccaggttcgcgggcacgcg
cacatctgcgtggaggagtgcgtggcgcagtacatggctctgtccaagcaggtctacacc
ttcgtgcaacccgcggtgcgcacggtggcgccggcgcgcggccccgtgtcgggcggcacg
cgcgtctccgtgcacggagcgcacctggacgccggcagcgcggtgcgggtggcgctgggc
aacgagagctgcgtgctgcgcagtcggagcgcgggcgagatcgtgtgcacgtccgcgtgg
gcgccccgcgggcccgacgtcgtcgccgtctccgtgtctctggacggcgccgagctgagc
accgccctccgctacgagtacacggaggaccccgtggtgacgcgcatcgagcccgagtgg
agcatcacgcatggaggaacgctgctcacggtcacgggcagtaacttgggcacggtccag
gagcctaagatgagggccaagtacaagggggtggagagcgtcgacacttgcaccgtgttc
aacgagacgacgctcatttgccgcgccccgggcatccagttcaacagccctggtcccctg
ccagcggagagcggcgatggaacctcgtcgtcgtcgtcgtcgtcagcatcgtcgtcttcg
tcggctgcgtcgctacccatgctggcgcccgtgcgccccgacgagctggggttcatcttc
gacgacgtgcgctcgctgctcgtcttcaacggttccgagttctactaccacgccagcccc
accttcgaacccctgggtcacgaccccctggacatcaagcccggctcgcccatcatcctc
aagggccggaacttgatgccgggcccagccggggggcggctgaactacacggtgctcatg
ggtgacgtggcatgcgccgtcaccgtgtccgacactcagctactgtgcgagtgcccggcc
ctgtcgggccaccacatgttgactgtgcgcgtgggctcgctggagcaggcggtggggcgc
gtgaggctggcgcacgacagcctgctcacgctgcctgccatcgtggggctgacggcgggc
ggcgggttgctgctgctggtcgtggtgggcgtgctcgtggcgtacaagcgcaagtcgcgc
gagagcgacctcacgctcaagcgcctgcagctgcagatggacaacctggagtcgcgcgtg
gcgctcgagtgcaaggaggcgtttgcggagctgcagaccgacatcaacgagctgacgagc
gacgtggacggcgcggggatccccttcctggactaccgcacgtacgcgctgcgcgtgctc
ttccccggcatcgacaaccacccggtgctcaccgtgctcgaggtgcccggcaatcggcac
gagtgcgtggagaaggggctgcggcacttcggcacgctgctgggcagcaaggtgttcctg
ctggcgttcgtgcgcacgctcgagtctcagcgcgccttctcgatgcgcgaccgcggcaac
gtggcgtcgctcgtcgccacggcgctgcaaggcaagatggagtacgcgaccgacgtgctc
aagcagctgctctctgacctcatcacacgcaacatcgagagccgcaaccaccccaagctg
cttctgcgaaggaccgagtccgtcgccgagaagatgctcaccaattggttcacgttctta
ctgcacaagtacctgaaggagtgcgccggcgagcccctcttcatgctctactgcgccatc
aagcagcagatggagaaggggccgatcgacgccatcacgggcgaggcacgctactcgctc
agcgaggacaagctcatccgccagcagatcgactaccgcaccctcacgctgaactgcgtg
accccggagagcgagaagaacgtggaggtgagcgtcaaggtcctcgactgcgacaccatc
acgcaggtcaaggagaagctgcttgacgccgtccacaagaacgtgccctactcccagcgg
cccaaggccatcgaccgcgacctcgagtggcgacagggccgcatggggcgcgtgatcctg
caggacgaggacgtcaccaccaagattgagaacgactggaagcagctcaacacgctggcg
cactaccaggtggccgacgcatccacggtggcgctggtgcccaaacagacggcatcctac
aacgccgccaactcgctgctctcgcgctccgtcaacaagtatgagagcatcatgaggcac
ccgggcagcccggactcgctgcgctcgcgcacgcccatgatcacgcccgacctggagagc
ggcaccaagctgtggcacctggtgaagaaccacgaccacgccgaccagaaggagggcgac
cgcggcaacaagatggtgtcagagatctacctcacgcggctgctcgccaccaagggcacg
ctgcagaagtttgtggacgacctgttcgagacgatcttcagcacggcgcaccgcggcagc
gccctgcccctcgccatcaagtacatgttcgacttcctggacgagcaggccgatcggcac
gccatccacgacccggccgtacgccacacctggaagagcaactgcctgccgctgcgcttc
tgggtgaacgtgatcaagaacccgcagttcgtgttcgacatccacaagacgagcatcacg
gacgcgtgcctctctgtcgtggcccagaccttcatggactcgtgctccacctcggagcac
cggctgggcaaggactcgccctccaacaagctcctctacgccaaggacatccccaactac
aagcactgggtggagaggtactacacggacatcggcaagatgccggcgatcagcgaccag
gacatgaacgcctaccttgccgaacagtcgcgcatgcacagcagcgacttcaacaccatg
agtgcccttaacgagctctacctgtacgtcagcaagtacaaggacgagatcctggccgca
ctggaccaagatgagcaggccaagcggcaccgcctggccttcaagctggaccaagtgatc
tcctgcatgtccggggacagttag
DBGET
integrated database retrieval system