Petromyzon marinus (sea lamprey): 116943965
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Entry
116943965 CDS
T09614
Name
(RefSeq) neurobeachin-like protein 1 isoform X1
KO
K23286
neurobeachin-like protein 1/2
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmrn04131
]
116943965
Membrane trafficking [BR:
pmrn04131
]
Endosome - Lysosome transport
Others
Others
116943965
BRITE hierarchy
Motif
Pfam:
Beach
DUF4800
NBCH_WD40
DUF4704
PH_BEACH
WD40
Neurobeachin
Laminin_G_3
DNA_pol3_gamma3
GRAM
Motif
Other DBs
NCBI-GeneID:
116943965
NCBI-ProteinID:
XP_032813242
EnsemblRapid:
ENSPMAG00000000006
LinkDB
All DBs
Position
19:13360928..13418348
Genome browser
AA seq
3012 aa
AA seq
DB search
MASQERLYELWMLYFTKKDLAYLRQWLEIFVVTHEASTLDQDVILMRGDPRPPDLSVLPA
SFLQVSSQQLVQCVHKLSVCLDDEHLSLALLIIKALIALCRNVQNVEDIGACSYISHVIT
LATMCIQQSKEQTKQREVSGELSLETFALHSLHLCQRLYDPYQNWARRIAGDAVSAMERS
RQRFKAAPLINEFVPFFYQCFQEYTHLPGKLTDQLLHLFGAVIAGNQRNALQAISPATLE
VLMRLLVDPAMAESSGSVARGRLGLTLKCLTEMVQALHTGSPDQRQVEVASVLDGYFKVL
NAEGVAMPGSLAWNDGLVELQMHMLRSIPEMLACSDRPVLQASFLNSNCFEHLTRLLHNS
KLLLSARAKAPGKSEKELANSKLQLEQGPGKHTDALTVLTIRVLTCVMHTSPAAKEVFKE
RIGYNHLFDLLQSLGQPSLALLYELLDMAVEGDHRQALSGASRMYGGGGGGVANVQALLM
LVRWLPMLESLSARSYLAAALHQLCCADRPSRTVCVNAGMMSCILDSLQMVDPVRHMDCA
VSLVGLLEALGSQSIRAKELFCLFRLLRIHASSPTESAFSSDVPTPDAATAAQSTSSSAA
SSDAPPAPALVPVGVSARLHVGAATALGTVLAVGGGDYLDNDGSRVDEGSAKRRWSSTDG
FPAEAAHPLTGTVTRALSAMARRDGVERAMHYFDLTHAMAGITVPAVQRWPGSGFSFHAW
FCLDATEQRLAHLAGGKRKQLYSFFTSSGTGFEAFVTGAGVLVVAVCTKKEYVTVSLPDT
CFHDSAWHCVAVVHTTARRALFSQCIVNIYVNGQLRDTAPLKFPPMGEAFTSCCIGSAGN
RTITPTPSQIPEPTSFFPGSPPHSCSSTSFSTSPSSHGVTAIPSPISASSSSVLDGSPTR
PSAFPGAGLPRLSSSSGVPRLAPGTAPCLRTIPAGTQDSEWGSPTSLRGQLGSVSVFHDA
LQPPQVKALYQAGPNNLFPFKPPECAPELTDLPAKMLLYYTPKACQKLLCLDLAPSHLFD
GRLTGQTVVNWDIKDVIHCMGGMAVLVPLLEQLVSTECPAAQQDDGGAFSSPARTSEARL
EGSHVACFLLLLRNFVRNHPANQESLAQSQGMATVGALILQSGKRHMDASVLTACQLLVE
AVIDSNALLLHQVYQALLFDFRLWSQADFPVRIGHIQYLSTIIKDNHKQFRRRYGVQFLL
DVVRTYYGSRSSELCADDLRVIRAAIFGLIKYYITKEVSSDEVQSIINFLASVGEEEQIN
ACLDMLLALLRSKGPSPSYEQLVLLLTEAGQCEGLYSLLLLQRKHSDVLREKLFRLFLRL
LRSERIGEKSKQRLRLRDGLFAGLVALQADMPVTLTVVRGMLLIIVTADTSPNYQDIMAV
VHFSRKADLSVRHAVCKKVFDLVYNSHDAIQQIARCTGWQDTLVRLLAWESNPNAQAMDT
ASPTDATPPLGAAVIPEGEVVTRADGDKGPRGHHKAKLCRQDTLSSTWFIQRNGQAEEAS
EPLSRQSGDPGEASDLPTRARCQGSFSFNNGIVLGGGDGAAGASDGESDSLASLSYQPHT
PFRDSPFDLTLDSPLPEGACAHGAPQGSRGSFGAGAPAAGGGGGSGSVPSTPSPLDTWKP
FPGSVSRQESSLSDAFDESLLNEEFFSNVEQSVPVEEDLCDLLVSVLFSAMWHGVEGSDE
TAWRERGQVFTALTKLGSRCLLLRPPSHIKRCLLELMLEACVSDVRDAALASLPGLADNA
LRLLRLVQDHLITEGQACPEFWSLKVMEGLVTLLDTLSGRQASLGTPLDLSETTHISQRL
LLGFIAHSDTQVCATAAAKLHTLLQTRPLSGREEAGYLLGRLDDALSRSAPEHGARHRAA
FDTPPPVGEEQTSPAVADHAVDLNRLTQRETGQPSSRPGTQDPDHPPNRPADRNAPDPQT
DRSAEEGTGATGSTEAPMPAQGQCGGGGGGGPMADSFVVPMLHALLERCHKLLALAQHLP
GLPVPNGSPTCLDDFQVYCRSTEWRLFVDIVVLPLMNQFEMERFAKGHDRMSCFWNSCFD
ALMGSSCRRDHLRNESQRKFQDQVVEPFRRRTRGESARFNNSLKAQAAHLTASLRQWRLT
RRYLSSERGPWADPEASPIHWRLASAETDSDMRLKLEPNLSFRTHRESSALRDNHGAQQV
SVPADSLSLVVVKEAKVDEVDEDKLEDEEEIAPVAPLGTGEGEQSQKEKLVLAEECQLIK
MVDAVPGRLELTTHHVYFYDLSGDKEEGMGLDFKCPLWQLREVHLRRYNLRRSALEIFFI
DQTSYFLNFTKEVRNRVYSRIVGLRPPNLVYYGSRSPQELLKASGITQKWVNREISNFEY
LMKLNTIAGRTYNDLAQYPVFPWVLSDYTSDELDLSNPGVFRDLSKPIGIVSERNAKEVK
DRYENFEDTTGTTGKFHYGTHYSNAAGVMHYMIRVEPLTTLHIQLQSGRFDCADRQFHSI
PATWQALMDSPNDVKELIPEFFYFPEFLENQNGFDLGTLQMSRETVNNVVLPRWAKSPDD
FIRKHRAALESEFVSAHLHEWIDLIFGYKQRGPAAVEAHNVFYYCTYEGAVDVDAIENEM
ERKAVEGMISNFGQTPCQLLKEPHPSRLSAVSALRALSRTDTFTMNLFLNTSELKTFFEE
GISDDIPIVKAVVPRNQPRSFISQGGLETLVTVSANSLVGAHGWLPYNKNISNYFTFSRD
PSVASIKTQRYITGPLAPGLEASCRLYAVSLDGKLLFSAGNWDNSVRATSLGKARPVAHY
TRHIDIVTCLALDGCGIHLVTGSRDTTCMVWQLLYQGGICVGLMPKPLQVLYGHTAEVLC
VAISTELDMAVSGAKDGMVMVHTVQHGQYMRCLRPPCESSLPLSVPALALSCEGHVVVYS
TLEAKASLKDKHTLHVYSVNGRHLASQGLYEQLADLCVAGEHVVLGSMQCNLSIRHLHSL
EEVTSLAMRVPVHCVSVTKERSHVLVGLADGKLIFVGVGRAPEIRSGQLRKLWGSTKRMS
QVSAGETRYNPS
NT seq
9039 nt
NT seq
+upstream
nt +downstream
nt
atggcctcacaggagcgactctacgagctgtggatgctgtacttcaccaagaaggacctc
gcctacctccgccagtggctggagatcttcgtggtgacacacgaggcctcgacgctcgac
caggatgtgattctcatgaggggggacccacggccccccgacctctcggtgctgccagcc
agcttcctgcaggtgtcgagccagcagctggtgcagtgcgtgcacaagctgtccgtgtgc
ctggatgacgagcacctgtcactcgcgctgctcatcatcaaggccctcatcgccctgtgc
aggaatgttcagaatgtagaagatattggagcctgttcctacatcagccatgtcatcacc
ctggcaaccatgtgcatccagcagtcgaaggagcagacgaagcagcgggaggtgagcggg
gagctgtccctcgagacgttcgctctccactcgctgcacttatgccagcgcctctacgac
ccctaccagaactgggctcggcgcatcgctggcgacgcggtctccgcgatggagcggagc
aggcagaggttcaaggcggcgccgctaatcaacgagttcgtgccattcttctaccaatgt
ttccaggagtacacgcacctgcctggcaagctgacggaccaactgctgcacctcttcggg
gccgtcatcgcgggcaaccagcgcaatgcactgcaggcgatctccccggccaccctggag
gtccttatgcggctcctggttgatccagccatggcggagtcctcggggtccgtggcccga
gggcgtctcggcctcaccctcaagtgcctgacggaaatggtgcaggcgctgcacacgggc
agcccggaccagcggcaggtggaggtggcctctgtgctggatgggtacttcaaggtgctg
aacgctgagggcgtcgcgatgcccgggtccctcgcgtggaacgatgggctggtggagctg
cagatgcacatgctgagatccatcccggaaatgttagcctgctcagaccggcctgtgctg
caggccagcttcctcaacagcaactgcttcgagcacctcacacggctactccacaacagc
aagctcttgttgagcgctagagccaaagcgccaggcaagagcgagaaagagcttgccaac
agcaaattgcagttggagcagggcccaggcaagcatacggacgccctgacggtgctcacc
atccgcgtgctgacgtgcgtgatgcacacctcgcccgctgccaaggaggtgttcaaggag
cggatcggctacaaccacctgttcgacctgctgcagtccctgggacagccgtcgcttgcg
ctgctgtacgagctgctggacatggcggtggagggagaccacaggcaggcgctgagcggc
gcctctcgcatgtacgggggcggcggcggcggcgtggccaacgtgcaggcactgctgatg
ctggtgcgctggctgcccatgctggagtcgctgtccgcccgctcctacttggccgccgcg
ctgcaccagctgtgctgcgccgaccgtcccagccgcaccgtctgcgtcaatgccggcatg
atgtcctgcatcctggactccctgcagatggtggaccccgtccggcacatggactgcgcc
gtgagcctcgtcggactcctcgaggcgctgggctcccagtccatccgagccaaggagctc
ttctgcctcttcaggctcctccgcatccacgcctcctccccaacggagtccgccttctcg
tcggacgttcccacccccgacgccgccaccgccgctcaatcaacctcctcctcggcggcg
tccagcgacgctccgccagcgccggctctggtgccggtcggcgtgagcgcgaggctgcac
gtcggcgccgccaccgccctgggcaccgtgctcgcggtcggcggcggcgattacctcgac
aacgacggcagccgggtggacgaggggagcgcgaagaggaggtggagttccacggacggt
ttccccgcggaagcggcgcacccgctcaccgggacggtgacgcgtgcgctgtcggccatg
gcgcggcgcgacggcgtggagcgcgccatgcactacttcgacctgacgcacgccatggcc
ggcatcaccgtgcccgccgtgcagcgctggcccggcagcgggttcagcttccacgcctgg
ttctgcctcgacgccaccgagcagaggctggcgcacctcgctggcggcaagcggaagcag
ctgtacagctttttcacgtcgagcggcacgggattcgaggcgtttgtgactggcgccggc
gtgctggtggtggccgtgtgcaccaagaaggagtacgtcaccgtcagcctgcccgacacc
tgcttccacgactcagcctggcactgcgtggccgtggtgcacaccaccgcccggcgcgcc
ctcttctcccagtgcattgtcaacatctacgtgaatgggcagctgcgcgatacggcacct
ctcaagttccccccaatgggcgaggcattcacgtcgtgctgcatcggctcggcgggcaac
cgcacgatcacgcctacgccgtctcagatccccgagcccacgtccttcttcccgggctcg
ccgcctcactcctgttcctccacctccttctcgacctccccgtcatcgcacggcgtgacg
gccatcccgtcgcccatctccgcgtccagctcctcggtgctggacggcagccccacccgg
ccctcggccttcccgggagccggcctgccgcgcctgtcctcgtcgtccggcgtgccgagg
ctggcgcccggcacggcgccgtgcctgcgcaccatcccggccggcacgcaggacagcgag
tggggctcgcccacatcgctgcggggccagctgggctccgtgagcgtcttccacgacgcc
ctgcagccaccgcaggtcaaggcgctgtaccaggccggcccaaacaacctgttcccattc
aagcctccggagtgtgcccccgagctgaccgacctcccagccaaaatgttgctctactac
acccccaaggcgtgtcaaaagctgctgtgcctggacctcgcccccagccacctgtttgac
ggacgactcaccgggcagacggtcgtcaactgggacatcaaggacgtgatccactgcatg
ggcggcatggccgtgctcgtgcccctgctggagcagctcgtgtccaccgagtgtcccgcg
gcgcagcaggacgatggcggcgccttctcgtctcccgcgcgcacctccgaggcgcgactg
gagggaagccacgtggcctgcttcctgctgctgctgcgcaacttcgtgcggaaccacccg
gccaatcaggagtcgctggcgcagagccagggcatggccacggtcggcgctctcatcttg
cagagcgggaagcgtcacatggatgcgagcgtgctgaccgcgtgccagctgctggtggag
gcggtcatcgatagcaacgcgctgctgctgcaccaggtgtaccaagcgctgctcttcgac
ttccgcctgtggagccaggccgacttccccgtgcgcataggacacattcaatacctgtcg
acgatcatcaaggacaaccacaagcagttccgacggcgctatggcgtgcagttcctgctg
gacgttgtgcgcacgtactacgggagccgctcgtcggagctgtgcgctgacgacctcagg
gtgatccgagccgccatcttcggcctcatcaagtactacatcactaaggaggtgtcgagc
gacgaggtgcagagcatcatcaacttcctggcctctgttggcgaagaggagcagatcaac
gcgtgcctggacatgctgctggcgctactgcgctccaagggcccgtcgcccagctacgag
cagctggtgctgctgctcacggaggccgggcagtgcgagggcctctactcgctgctgcta
ctgcagcgcaagcactcggacgtgctgcgtgagaagctcttccgcctgttcctgcgcctg
ctacgcagcgagcgcatcggggagaagagcaagcagcggttgcgtctgcgggacgggctg
ttcgcggggctggtggcactgcaggctgacatgcccgtcacgctcaccgtcgtgcgaggg
atgctgctcatcatcgtcaccgccgacacgtcacccaactaccaggacatcatggccgtg
gttcacttctcccgcaaggccgacttgtccgtcaggcatgccgtgtgcaagaaggtgttt
gacctcgtgtacaactcgcacgacgccatccagcagattgcgcgttgcacgggctggcag
gacacgctcgtccgtctcctggcctgggagtccaaccccaacgcccaggccatggacacc
gccagccccacggatgccaccccgccgctgggggccgccgtaatccccgagggagaggtc
gtgacccgggcggacggggacaagggaccccgagggcaccacaaggccaagctgtgccga
caggacacgctgtccagcacgtggttcatacagaggaacggccaggcggaggaggcatcg
gagccactgagccggcaatccggcgaccccggtgaggcctccgacttgccgacgcgcgcg
cgctgccagggctcgttcagcttcaacaacggcatcgtcctgggtggcggggacggtgcg
gcgggcgccagcgacggagagagcgacagcctcgcctcgctctcctaccagccccacacg
cccttccgcgactcgcccttcgacctgaccctcgacagccccctgcccgagggggcgtgc
gcgcacggggcccctcagggctccagggggtcctttggggcgggcgccccagccgcgggg
ggcggcggtggttcggggagcgtgccgagcaccccgtccccgctcgacacgtggaagccg
ttccccggatccgtgagccgccaggagtcatcgctgtcggacgctttcgacgagagcctc
ctcaacgaggagttcttctccaatgtggagcaatcggtccccgtggaggaggacctgtgc
gacctgctggtgagcgtgctcttctcggccatgtggcacggcgtggagggctcggacgag
acggcgtggcgcgagcgcggccaggtgttcacggcgctcaccaagctgggctcccgctgc
ctgctgctgcgtccacccagccacatcaagcgctgcctgctggaactcatgctggaggcg
tgcgtgtcggacgtgcgcgacgccgcactcgcctcgctgccggggctcgccgacaacgcc
ctgaggctgctgcgcctcgtgcaggaccacctcatcaccgagggccaggcctgccccgag
ttctggagtctcaaggtgatggaggggctggtgacgctgctggacacgctgagcggacgg
caggcctcgctgggcacgccgcttgacctctccgagacgacgcacatcagccagcgcctc
ctgctgggcttcatcgcacacagcgacacgcaggtgtgcgccactgccgctgccaagctg
cacacgctgctgcagacgcggccgctgtcaggccgcgaggaggccggctacctgctgggc
cgcctggacgacgccctgagccgctcggcgccggaacacggggcccgccaccgggcagcg
ttcgacaccccccctcccgtcggcgaggaacaaacatctcccgcggtggcagatcacgct
gttgacctcaaccggctgacgcagcgggagaccgggcagccgtcgtctcggcctggaacc
caggaccctgaccacccaccgaaccggccggcggaccgcaacgcgccggacccgcaaacg
gaccgctcggcagaggagggcaccggtgccaccggttcgacggaggcaccgatgcccgcg
cagggtcagtgcggcggcggtggcggcggcgggcccatggcagactccttcgtggtgccc
atgctgcacgctctgctggagcgttgtcacaagctgctggcactggcgcaacacctcccg
ggcctgccggtgcccaacggcagccccacgtgtctggacgacttccaggtctactgccgt
tcgaccgagtggcggctcttcgtggacatcgtggtgctgccgctgatgaaccagtttgag
atggagcgcttcgccaagggccacgaccgcatgagctgcttctggaactcgtgcttcgac
gcactcatgggctcctcgtgccggcgcgaccacctccgcaacgagagccagcgcaagttc
caggaccaggtggtggagccgttccgccggcgcacgcggggggagagcgcgcgcttcaac
aactcactcaaagcacaggcggcacacctgaccgcgtcgctgcgccagtggcgcctcacc
cggcgctacctctcgagcgagcgcggaccctgggccgacccggaggcttcccccatccac
tggagacttgcgagcgcggagaccgactctgacatgcgcctcaagctggagcccaacctc
tcgttccggacgcaccgcgagtccagcgcgctgagggataaccacggcgcccagcaggtg
tccgtgccggcagacagcctctccctcgtggtcgtgaaggaagccaaggtagacgaggtg
gacgaggacaagctggaggacgaggaggagatcgcccccgtcgccccgcttggaaccggc
gagggcgagcagagccagaaggagaagttggtgctggccgaggagtgccagctcatcaag
atggtggacgccgtgcccgggcgactggagctcacgacgcaccacgtctacttctacgac
ctgtccggtgacaaggaggaaggcatggggttggacttcaagtgcccactatggcagctg
cgggaggttcacctccgccggtacaacctgcggcgctcggcactcgagatcttcttcatc
gaccagaccagctacttcctcaacttcaccaaggaggtcaggaaccgggtgtacagccgg
atcgttggtctgcgccccccaaacctggtttactacggctcgcgctccccgcaggagctg
ctcaaggcctcggggatcacgcagaaatgggtgaaccgggagatctcgaacttcgagtac
ctgatgaagttgaacacaatcgctgggcgcacctacaacgacctggcgcagtaccccgtg
ttcccctgggtgctcagcgactacacgtccgacgagctggacctgagcaacccgggggtg
ttccgcgacctctccaagcccatcggcatcgtgagcgagcgcaacgccaaggaggtcaag
gacaggtacgagaactttgaggacacgacgggcacgacggggaagttccactacggcacc
cactactcgaacgcggcgggtgtgatgcactacatgatccgcgtggagcctctcaccacg
ctccacatccagctgcagagcggcaggttcgactgcgccgaccggcagttccactccatc
ccggcgacgtggcaggcgctcatggacagccccaatgacgtcaaggagctcatcccagag
ttcttctacttccccgagttcctggagaatcagaacggctttgacctggggacgctgcag
atgtcccgtgagacggtgaacaacgtcgtgctgccacgctgggccaagtctcccgacgac
ttcatccgcaagcaccgcgccgcgctggagtcggagtttgtgtcggcccacctgcacgag
tggatcgacctgatcttcggctataagcagcggggcccggcggccgtggaggcccacaat
gtcttctactactgcacctacgaaggcgccgtggatgtagacgccatcgagaacgagatg
gagcgcaaggcggtggaggggatgatcagcaacttcgggcagacgccatgccagctgctc
aaggagccgcacccgtcgcgtctgtcggccgtgtcggcgctccgcgccctctcacgcaca
gacaccttcaccatgaatctcttcctcaacacttccgagctcaagacgttttttgaagag
ggcataagcgatgacattcccatcgtgaaggcggtggtgccgaggaaccagcctcgctcc
ttcatctcgcagggcggcctcgagacgctggtgacggtgagtgccaacagcctggtgggc
gcgcacggctggctcccctacaacaagaacatctccaattacttcaccttctcacgggac
ccttcggtcgcaagcatcaagacccagcgctacatcacgggcccgctggcgcccggcctg
gaggcgtcgtgccggctatatgccgtctctctggacggcaagctgctgttcagcgccggc
aactgggacaacagcgtccgcgccacgtcgctgggcaaggcgcggcccgtggcgcactac
acccgccacatcgacatcgtgacgtgcctggcgctggacggttgcggcatccacctggtg
acgggctcgcgggacaccacgtgcatggtgtggcagctcctctaccagggtgggatatgc
gtggggttgatgcccaagccgctgcaggtgctgtacggccacacggcggaggtgctgtgc
gtggccatcagcaccgagctcgacatggctgtctcgggcgccaaggacggcatggtgatg
gtgcatacggtgcagcacggccagtacatgcgctgcctgcgcccgccgtgtgagagctcc
ctgccgctgtccgtgccggcgctcgcgctctcctgcgagggccatgtcgtcgtgtacagc
acgctggaggccaaggccagcctcaaggacaaacacacgctgcacgtgtactctgtgaac
gggcggcacctcgcctcccagggcctgtacgagcagctcgccgacctgtgcgtcgcaggg
gagcacgtggtgctgggcagcatgcagtgcaacctgtccatacggcacctgcacagcctg
gaggaggtgacgtcgctggcgatgcgcgtgcccgtgcactgcgtctccgtcacgaaagag
cgcagccacgtgctcgtcggcctggccgacggcaagctcatcttcgtgggcgtcgggcgg
gcacccgagatccgatcggggcagctccgcaagctgtggggcagcaccaagaggatgagt
caagtgtcggccggggagacgcggtacaacccgtcgtga
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integrated database retrieval system
