Petromyzon marinus (sea lamprey): 116944207
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Entry
116944207 CDS
T09614
Symbol
RBCK1
Name
(RefSeq) ranBP-type and C3HC4-type zinc finger-containing protein 1 isoform X1
KO
K10630
RanBP-type and C3HC4-type zinc finger-containing protein 1 [EC:
2.3.2.31
]
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn04217
Necroptosis
pmrn04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
116944207 (RBCK1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
116944207 (RBCK1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmrn04121
]
116944207 (RBCK1)
Enzymes [BR:
pmrn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
116944207 (RBCK1)
Ubiquitin system [BR:
pmrn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
116944207 (RBCK1)
Multi subunit Ring-finger type E3
LUBAC complex
116944207 (RBCK1)
BRITE hierarchy
Motif
Pfam:
zf-RING_UBOX
zf-RING_2
zf-RING_5
ubiquitin
zf-RanBP
zf-C3HC4_2
zf-RING_11
Ubiquitin_2
ChapFlgA_N
Motif
Other DBs
NCBI-GeneID:
116944207
NCBI-ProteinID:
XP_032813611
EnsemblRapid:
ENSPMAG00000007950
LinkDB
All DBs
Position
20:complement(9800871..9826097)
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AA seq
554 aa
AA seq
DB search
MEATQDLSETLVQSELLSVQLGRAIHAGDVAAAQQLAARLAECRSPLLVQLKTPGQSSSS
FRIKVQVEDTTSSVGPIYVKVSSHMTVDTLKQQIFRHYDIHPKVQRWVINQRLAEDSKSL
HSYGLQREGDEAFLYLVSAQQANLKVEEYKRAQIDLLQITATPHQSSGHPPAISHPAAPV
FYGGLGEGAPIVKMEPVNPVSAPNWPAAELIHADAPLFPPAAAAAAATTPRRPASPPPVG
WPCPVCTFVNLPLRPGCDQCGTARPADYQVPAGYQPTDRERRITDQEMDNRRKLEETRVK
KRRENFQRLMQEDEQELVPNKEAFTCPICFVDYEPGEGVTLRECLHNFCKDCLHGTIVNC
EDAEVTCPNQDGEISCEFKLHQREIKALVSEVEYCRFLGKGLAIAENRSADSYHCVTADC
LGWCFYEDMVNDFLCPICKKSNCLTCKAIHEGMDCQEYQDDLKLRSDNDQAAMQTNLMLQ
TMVQTGDAMHCPTCKVIVQKKDGCDWICCSICKTEICWVTKGARWGPNGTGDTSGGCQCR
INDRMCHPDCMNCH
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgacgcaggacctttcggagacgcttgtgcagtcggagctgctgtccgtacag
ctgggccgggccatccacgctggcgatgtggcggcggcgcaacagcttgcggcccgcctg
gccgaatgccgctcccccttgctcgtgcaactcaagacgccaggacaatcgagcagcagt
ttcaggataaaggtgcaggtggaggacaccacaagctcagtggggcccatctacgtgaag
gtttcttcccacatgactgtggacacactcaagcagcaaattttccgtcactacgacatc
cacccaaaggtgcagcgctgggtaatcaaccagcgcctggcggaggattcaaagtccctg
cacagttacgggttgcagcgtgaaggtgacgaggccttcctctacctggtctcggcccag
caggccaacctaaaagtggaagagtacaagcgcgctcagatagatcttttacagatcaca
gccaccccacaccaatcttcaggccacccacctgccatcagccacccagcagccccagta
ttctatggtgggcttggggagggtgcaccgattgtcaagatggagccagtgaacccagtt
tctgcgccaaattggcccgcggccgagctaatccacgctgatgcacccctcttcccacct
gctgctgctgctgctgctgccaccaccccgagacggcccgcctcgccacctccggtgggc
tggccgtgcccggtgtgcacgtttgtgaacctcccgttgcggccgggctgcgatcagtgc
ggcacggcgcggcctgcggattaccaagtgccggcggggtaccagcccacggaccgcgag
cgccgcatcaccgatcaggagatggacaaccggcggaagcttgaggagactcgcgtgaag
aagcggcgggaaaacttccagcgcttgatgcaggaggacgagcaggagctggtgcccaac
aaggaggcgttcacgtgccccatctgtttcgtggactatgagcccggcgagggggtcact
ctgcgcgagtgcctgcacaacttctgcaaggactgcttgcacggcaccatcgtgaactgc
gaggatgcagaggttacgtgccccaaccaggacggtgaaatcagctgcgagtttaagctg
caccagcgagagatcaaggccctggtgtcggaggtggaatattgccgcttcctggggaag
ggactggccatcgccgagaaccgcagcgctgacagctaccactgcgtgacggccgactgc
ctcggctggtgtttctacgaggacatggtgaacgatttcctgtgtcccatctgcaaaaag
tccaactgcctcacctgcaaggccatccatgagggaatggactgtcaggagtatcaggat
gatctgaagctgaggtcagacaacgaccaggcagcaatgcagaccaatctaatgctgcag
acgatggtgcagacgggtgatgccatgcactgcccgacgtgcaaggtgatcgtgcagaag
aaggacggctgcgactggatttgctgcagcatatgcaagaccgagatctgctgggtgacc
aagggggctcgctggggacctaatggcacaggggacacgagtggaggctgtcagtgtcgc
atcaatgacaggatgtgccaccctgattgtatgaactgccactga
DBGET
integrated database retrieval system
