Petromyzon marinus (sea lamprey): 116945433
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Entry
116945433 CDS
T09614
Name
(RefSeq) DENN domain-containing protein 5A-like
KO
K20164
DENN domain-containing protein 5
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmrn04131
]
116945433
Membrane trafficking [BR:
pmrn04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
116945433
BRITE hierarchy
Motif
Pfam:
DENN
RUN
dDENN
uDENN
PLAT
Motif
Other DBs
NCBI-GeneID:
116945433
NCBI-ProteinID:
XP_032815636
LinkDB
All DBs
Position
24:complement(2850277..2929969)
Genome browser
AA seq
1547 aa
AA seq
DB search
MSGMGGRLLDYLVVCGLDTNTGLEPDDLSGENFECTPLRRTFKAKVLAHYPQAVDWNPFD
GDAVGMLCMPKGLSFRTQTDDRTPHFHSFLITREDGTRTYAFALTFYEEVTCRSICHAMH
TLYAMHNAQSGDGGGGGGGGGGGGGGVRDIATFAIPESPDSPGVSAGRFPAETPPLPPAE
RRGRHGGGGGAPIGGGGGGEGRLLQRFNSYEMGCDTLYVSKALCLITPLPFAQACRKVLL
QLHRAVTSPRPPPLPLESYVYNLLYEVPLPPPGRSLRFAGVQGPLVVCQRPGAAELPLLD
HALRELVELLGLDNVLQLFTCALLEIQILLYSNDYQQLMLVAECVTALLFPFAWQHVYVP
ILPASLLYFLEAPVPYLMGLHAESHDHCCLPELPNEANLCFVDITNHRVDVPEDLPLFPH
RAELVAELAAVLVAFRVAPDPPPPPGGGGGGKPPAATAAGAAGVADPAPAPSRDSAAAPD
PADGAALRRGCAEPARRRRPRDDEANGNGPAAARDGPERLTRIQALARRAGIGLPAADPA
DGAAAPEPGDGTGRPRDAESRPGEERPAAAAAAARASGLSEREVDDLRLNAHLREAFANR
FTHMFADYEVFVIAPAGQEMEAWLGSSREQTQNFDKASFLSDQPEPYLPFLSRFLETQMF
ASFIDAKILSQWDEKDPALAVFDARVEKTRQLHVRTPTLRTSMYLRSTSGEEAELAVLSR
LARIDHTAVRPHLLDMRIGQGKYEPGFFPKLQADILATGPPGNKWVKRASKAPWLRRDHL
RQNSEHQQLDNEQVPCDCDFPKSLPLGGAQLPLENKPQTNAGSAPPAANARACRTTHTHL
RWGKQQNNPARAKPPPNPARRRPPQPPLAAAVTEMSPGLDALALPGWRVVKRPRPPRKSM
SECNLKFLADGRGLGKGGVRQPKLADLSPSVFAKTNLKFVEGLLKECRTKTKRMLVEKMG
QEAVELGHGEVTLTGVEENTLIASLCDLLERIWSHGLLAKQGKSALWSHLLSCQEKEEKK
EVAFESAVPLDATILSCDWWVFPGIAANQERRRSDGGLIMPPLKASLTQDMRHIQNIAEI
RTDVGRARAWVRLSMEKKLLSRHLKQLLSDEDLSGRLYKPYAFLHMEDEKEQFLYHLLTL
NAVDYYCFTNAFSTVVMRYRVLIVPSRKVGPSVTTANPWVCVGGDLGDTGVLLIPRSSLE
LSFECVNLGRLTTVQIGHDNAGLLTKWLVECVMVRNEITGHLYRFPCGRWIGRGVDDGSL
ERILVGEVVTAAAAAAAAAARHRASRGAAPGARSPALARRGPASSAGSAAACANAAANGA
GGAKMIPEQIQEGVGEAVNNLVKHFHKPEKERGSLTLLLCGEGGLVWALGHVFQHGLRSP
RLFQKPVFVWDFVERVASHLEENAEGTAAATALLRHGSGSERPLLAATPAPPLPAPEPDA
DLRRGEGPSREVQARRALCSLVRAINGAPRHIGKDGKFQLLVCFGAREQLLHSWLSLLVS
SPVLQQMYEEAALLRNARLVSDLERLLQALLGFPISLESSLVKGIDT
NT seq
4644 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcatgggagggcgtctgctcgattacctcgtggtgtgcggcctcgacaccaac
acggggctggagcccgacgacctctctggagagaactttgagtgcacccctctgcgtcgc
accttcaaggccaaggtgctggctcactacccccaggcggtcgactggaaccccttcgat
ggagacgccgtgggcatgctgtgcatgccgaaggggctgtcgttccggacgcagacggac
gaccgcacgccacacttccactcgttcctcatcacccgcgaggacggcacgcgcacttac
gccttcgcgctcaccttctacgaggaggtcacgtgccgctccatctgccacgccatgcac
acgctctacgccatgcacaacgcgcagagcggcgacggcggcggcggcggcggcggcggc
ggcggcggcggcggtggcgtccgcgacatcgccacgttcgcgatccccgaatcgccggac
agccccggggtctccgcgggacgcttccccgcggagacgccgccgctgccgccggcggaa
cggagggggcggcacggcggtggggggggcgctccgatcggcgggggcggcggcggggag
gggcgcctgctgcagcgcttcaactcgtacgagatgggctgcgacacgctctacgtctcc
aaagcgctgtgcctcatcacgccgctccccttcgctcaggcgtgtcgcaaggtgctgcta
cagctgcaccgcgcggtgacgtcaccgaggccgccgccgctgccgctcgagagctacgtc
tacaacctcctgtacgaggtgccgctgcctccgccgggccgctcgctgcgcttcgccggc
gtgcagggccccctggtggtgtgccagcggcccggcgccgccgagctgccgctgctggac
cacgcgctgcgcgagcttgttgagctgctgggcctggacaacgtgctgcagctgttcacg
tgcgcgctgctcgagatacagatcctgctctactccaacgactaccagcagctgatgctg
gtggcggagtgcgtgacggcgctgctcttcccgttcgcgtggcagcatgtctacgtgccc
atcctgcccgcgtcgctactctacttcctggaggcgcccgtgccctatctcatggggctg
cacgcggagagccacgaccactgctgcctcccggagctgcccaacgaggccaacctgtgt
ttcgtggacatcaccaaccaccgggtggacgtccccgaggacctgccgctcttcccgcac
agagcggagctcgtggccgagctggccgccgtcctcgtcgcgttccgcgtggcgccggat
ccgccgccgccgcccggcggcggcggcggcggcaaaccccccgcggcgaccgccgccggc
gccgccggcgtcgccgacccggccccggccccctcccgcgactccgcggcggcccccgac
cccgccgacggcgccgccctccggcgagggtgcgccgagccggcgcggcgacgtcggccg
cgcgacgacgaggccaacggcaacgggcccgcggcggcgcgggacggcccggagcggctc
acgaggatccaggccctggcgcgccgcgcgggcatcggcctgccggccgccgacccggcc
gacggcgcggccgcgccggaaccgggcgacgggacggggcgtccgcgggacgcggagagc
aggccgggagaggagcggcccgcggcggcggcggcggcggcgagggcgagcgggctgagc
gagcgggaggtggacgacctgcggctgaacgctcacctccgggaggcgttcgccaaccgc
ttcacgcacatgttcgccgactacgaggtgttcgtcatcgcgcccgccggccaggagatg
gaggcctggctaggcagcagccgcgagcagacgcagaacttcgacaaggcgtcgttcctg
tcggaccagcccgagccgtacctgcccttcctgtcgcgcttcctcgagacgcagatgttc
gcctccttcatcgacgccaagatcctgtcccagtgggacgagaaggacccggcgctggcc
gtgttcgacgctcgcgtggagaagacgcgtcagctgcacgtgcgcacgcccaccctgcgc
acctccatgtacctgcgcagcacgtccggcgaggaggccgagctggccgtgctgtcgcgc
ctggcgcggatcgaccacaccgccgtgcgcccccacctgctcgacatgcgcatcggccag
ggcaagtacgagccaggcttctttcccaagctgcaggccgacatcctggccaccgggccc
cccgggaacaagtgggtgaagagagcgagcaaagctccgtggctgaggcgggatcacctg
cggcaaaactctgagcaccagcaactggacaacgagcaggtgccgtgcgactgcgatttc
ccgaaatctctcccattgggtggcgcgcaacttcccctcgaaaacaaaccgcaaactaac
gcgggctccgccccccccgccgcgaacgcgcgtgcatgccgcacaacgcacacccatctg
cgatggggaaaacaacaaaataaccccgcgcgcgcaaaaccaccaccaaaccccgcgcga
cgacgaccgccgcagccgccgctcgctgccgccgtcacggagatgagcccgggcctggac
gcgctggcgctgcccgggtggcgcgtggtcaagcgtccgaggcccccgcgcaaatccatg
tccgagtgcaacctgaagttcttggccgacggccgaggcctgggcaagggcggcgttcgg
cagcccaagctggccgacctctccccttcggtgttcgccaagaccaaccttaagttcgtg
gagggcctgctcaaggagtgccgcaccaagaccaagcgcatgctggtggagaagatgggc
caggaggccgtggagctgggccacggcgaggtgacgctcaccggcgtcgaggagaacacg
ctcatcgccagcctctgtgacctcctcgagcgaatctggtcacacgggctcctggccaag
cagggaaagtctgcgctgtggtcccacctgctgagctgccaggagaaggaggagaagaag
gaggtcgcgtttgagagcgccgtccctctggatgccaccatcctgagctgtgattggtgg
gttttcccagggatcgcggccaatcaggagaggagacggtccgacgggggcctcattatg
cccccactcaaagcctctctaacacaagacatgaggcacattcagaacatcgcggagatt
cgcacggacgtggggcgagcgcgtgcctgggtccgcctctccatggagaagaagctgctc
tcccggcacctgaagcagctgctgtcggatgaggacctctcaggccgcctctacaagccg
tacgccttcctgcacatggaggacgagaaggagcagttcctgtaccacctgctcacgctc
aacgccgttgactactactgctttaccaacgcgttctccaccgtcgtgatgcgctaccgc
gtgctcatcgtgccgagccgcaaggtggggccctccgtgacgacggcaaacccgtgggtg
tgcgtgggcggtgacctgggcgacacgggcgtcctgctcatcccccgcagctctctggag
ctctcctttgagtgcgtgaacttaggccgcctcaccacggtgcaaatcggccacgacaac
gcggggctgctcaccaagtggctggtggagtgcgtcatggtgcggaacgagatcacgggg
cacctgtacaggttcccgtgcggccgctggattggccgcggcgtggacgacggaagcctc
gagcgcatcctggtgggcgaggtggtgacggcggccgcggctgcggccgcggcggcggcg
cggcaccgcgcgagccgcggggcggcgcccggcgctcgctcgccggcgctcgcccgccgg
ggccccgcatcgtccgctggctccgccgcagcctgcgccaacgcggccgccaacggggcc
ggcggcgccaagatgatcccagagcagatccaggaaggggtgggtgaagccgtcaacaac
ctggtgaagcatttccacaagcctgagaaagagcgtgggtccctgacgctgctgctgtgt
ggagagggaggcctggtgtgggcgctggggcacgtgttccagcacggcctacgctcccca
cgcctcttccagaagcctgtcttcgtctgggactttgtggagagggtggcctcgcacctg
gaggagaacgcggagggcacggcggccgcaacggcgctcctccggcatggcagtggctcg
gagcggccgctcctggcggcgaccccggccccgccgctgcccgcgccggagccggacgcg
gatctccggcggggagaggggccgagccgggaggtgcaggcgcgacgcgccctctgctcg
ctcgtgcgcgccatcaacggggcaccgcgacacatcggcaaggatggcaagttccagctg
ctcgtgtgcttcggagcccgggagcagctgctgcacagctggctgtctctgctcgtcagc
tccccggtgctgcagcagatgtacgaggaggccgctctgctgcgcaacgcgaggctggtg
agcgacctggagcggctcctgcaggccctgctcggcttccccatcagcctggagtcgtcg
ctcgtcaagggcatcgacacgtga
DBGET
integrated database retrieval system
