Petromyzon marinus (sea lamprey): 116946899
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Entry
116946899 CDS
T09614
Name
(RefSeq) ATP-dependent translocase ABCB1-like isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
pmrn
Petromyzon marinus (sea lamprey)
Pathway
pmrn02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
116946899
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pmrn02000
]
116946899
04147 Exosome [BR:
pmrn04147
]
116946899
04090 CD molecules [BR:
pmrn04090
]
116946899
Enzymes [BR:
pmrn01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
116946899
Transporters [BR:
pmrn02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
116946899
Exosome [BR:
pmrn04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
116946899
CD molecules [BR:
pmrn04090
]
Proteins
116946899
BRITE hierarchy
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
Zeta_toxin
Rad17
AAA_16
RsgA_GTPase
AAA_28
AAA_5
G-alpha
AAA_29
AAA_7
DUF815
AAA_14
SbcC_Walker_B
AAA_30
DEAD
DUF2207_C
Motif
Other DBs
NCBI-GeneID:
116946899
NCBI-ProteinID:
XP_032818043
EnsemblRapid:
ENSPMAG00000003363
LinkDB
All DBs
Position
2:complement(12170148..12213929)
Genome browser
AA seq
1344 aa
AA seq
DB search
MIKKYIFPQDVQPSSTVMTCDAQNCNRKMEGEEGSRYGVRVDNHAGTCTPLLFHAGKNMG
KKKAVVDVGAVENGDAAAKNLDPLYENITDGGVNTEQDAKHGKKKKEPKVKTNMVGLFGL
FRFASGLDKLMMVVGLIFAIANGAALPVMIILFGEMTDTFVNDAQNNTGTNVTESESLED
QMTRYAYYYVGIGGGAFLASYIHISFWVLSASRQARRIRETFFHAVLRQEIGWFDVNQTG
ELNTRLTDDINKVTDGMGDKVSLLAQSLATFISGFIIGFIKGWKLTLVILAISPVLAISA
GLWSKILTSFTNRELLAYSKAGAVAEEVLSAIRTVMAFGGQEKELKRYDKNLVEARNIGI
KKAITTNLSIGFTMFIVYASYSLAFWYGSRLVLEDTSYTIGNVMIVFFAVIIGAFGIGQA
APFLEAISVARGAAYTIFEIIDRQPQIDSFSEEGYKPEKITGNVEFQDVHFNYPSRADVP
VLKGVNLQVKSGQTVALVGSSGCGKSTTIQLLQRFYDPQQGTIMVDGRDVRTLNLRSLRQ
LIGVVSQEPVLFATTIAENIRFGHEKVTMEDIERAARNANAYDFISQMPERFNTLVGDRG
AQLSGGQKQRIAIARALIRNPKLLLLDEATSALDGESEAIVQEALDKAREGRTTLVIAHR
LSTIRNADIIAGFDGGVIVELGTHDELMKRNGVYHTLVSMQTFHQKDDNGIEDIKAKRLD
SPTGDKAFFRSLSQQSHAKESDLAKEDGEDNKETEEVKIPKVSFWKVLALNKKEWPYITL
GTLCAGVNGALQPAFAVIFSRIIGVFAETDLVKREEQSNLYSLLFLVLGIVSFVTFFLQG
FLFGRSGELLTMKLRSMGLRAMLRQDMMWFDDPKNSTGALTTRLATDASQVQGATGARLA
TIAQNIANMGTAIVISFVYGWELTLLILAIVPFVGAAGFLEMQALTGQANRDKKLLEEAG
KIATEAVENIRTVASLTRERTLEKIYQDSLEGPAKTAKKKSQFYGLTYGFSQGVVYLAQA
AAFRFGAFLVTAGRMEFENVFLVFSAIVFGAMAVGQTSSFAPDYAKAKTSANHLFYLFQL
IPAIDSYSDEGEKLEDCEGNVEFQSVGFNYPMRPNVEVLKGLSLKVENGQTLALVGSSGC
GKSTSVQLLERFYDTLSGNVLIDGKDVRSLHIQWLRAQMGIVSQEPVLFDCSMAENIAYG
DNSRIVPQDEIVAAARAANIHTFIDSLPEKYNTKVGDKGTQLSGGQKQRIAIARALVRQP
KILLLDEATSALDTESEKIVQEALDRAREGRTCIVIAHRLSTVQTADKIAVIQNGQVIEQ
GTHQQLLAKKGAYHLLVNAQVSQI
NT seq
4035 nt
NT seq
+upstream
nt +downstream
nt
atgataaaaaaatatatatttccacaggatgtgcagcctagcagcacggtaatgacgtgt
gacgcgcaaaactgcaacaggaagatggaaggcgaggaaggcagccggtatggggtgcgt
gtggataaccatgccggtacctgtacacctcttttgttccacgcaggtaaaaacatgggc
aagaagaaggctgtggttgacgtgggagctgttgagaatggagacgccgcggcaaagaat
cttgatcctctttatgaaaatataacggatggtggcgttaacaccgagcaagacgccaag
catggcaaaaagaaaaaagaacccaaagtgaaaaccaatatggttgggctcttcggactg
ttccgttttgcaagtgggctggacaagctgatgatggtggttggactcatctttgcaatt
gcaaacggagccgccctcccagtaatgatcatcctctttggagaaatgacagacaccttt
gtcaatgatgctcagaacaacaccgggacaaatgtaactgaatcagaaagccttgaggac
cagatgacacggtacgcgtactattatgtgggcatcggcggcggtgcgttcctggcatca
tacatccacatctccttctgggtgctgtcggcatcgcgccaggcacgcaggatccgagag
acgtttttccacgccgtgctgcggcaggagattggctggttcgatgtcaaccagacaggg
gagctgaacacgcgcctaaccgatgacatcaacaaggtcacagacggcatgggtgacaag
gtgtcactgctcgcacagtccctggcgaccttcatctcgggcttcattattggattcatc
aagggctggaagctgacgctcgttatcctggccatcagccccgtgctcgctatctccgca
gggctctggtcaaagatcctgacctcgttcacgaaccgtgagctcttggcgtactcgaag
gcaggcgccgtggcggaggaggtcctctctgccattcgcaccgtcatggcattcgggggt
caggagaaggagctcaagagatacgacaagaaccttgtggaggccagaaatattgggatt
aagaaggccatcactacaaacctgtcgattggttttaccatgttcatcgtatatgcctcg
tactcgctggcattctggtacggaagcagactggtgttggaggacacttcctacacaata
gggaacgtcatgattgtgtttttcgccgtcatcattggagcatttggaattggccaagcg
gccccattccttgaggccatctctgtcgctaggggtgctgcttataccatctttgagatc
attgaccggcaaccacagatcgacagtttttccgaagagggttacaagcctgaaaaaatc
accggcaatgtggagtttcaagacgtacacttcaactatccgtcgagagcggacgtaccg
gtgctgaagggggtcaacctgcaagtgaagagcggccagacagttgcgctggtgggcagc
agcggctgcggcaagagcacgaccatccagctgctgcagcggttttacgacccgcagcag
ggcacgatcatggtagacgggagggacgtgcgcaccctgaacctgcgctccttgcgtcag
ctgatcggtgtcgtgagccaggagcctgtgctcttcgccacaaccatcgccgagaacatc
cgcttcggtcacgagaaagtcacgatggaggacatcgagagggcggctcggaacgccaat
gcatacgacttcatcagccaaatgcccgagagattcaacacgctggttggggaccgcgga
gcgcagctcagtggcgggcagaagcagcgcatcgccatcgcgcgcgccctcatccgaaat
cccaaactcctgctcctcgacgaggccacatcggccctggacggggagagcgaggccatt
gtacaggaggccctggacaaggcaagagaaggccgaacgacgctcgtgattgcccatcgc
ctctccacaatccgcaatgccgacatcatcgcaggcttcgatggaggtgtcatcgtggag
ctgggcactcacgatgagctgatgaagcgcaacggagtctaccacacgctggtctccatg
cagacgttccaccaaaaggatgacaatgggattgaagacatcaaagccaaacgcctagac
tcgcctactggtgacaaggcctttttccgcagcctgtcccagcagtcacatgcaaaagag
tcagacttagccaaagaagatggggaagacaacaaagagacagaggaagtaaagatcccg
aaggtgtccttctggaaggtgttagcgctgaacaagaaggagtggccgtacattacccta
ggcaccttgtgtgccggagtcaacggcgcattgcagcccgcctttgccgtcatcttctct
cgcatcatcggggtgtttgcagagacagacctcgtgaaacgagaggaacagagcaacctc
tactccttgctcttccttgtccttgggatcgtctcctttgttacatttttccttcagggc
ttcttgtttggtcgttctggtgagctgctcacaatgaagttgagatcaatgggcctgagg
gccatgctcagacaggatatgatgtggttcgatgaccccaagaacagcacgggcgcgctg
accacacgccttgccactgacgcctcccaagtccaaggggcaactggtgccagactcgca
accattgcccagaacatcgccaacatgggcacggccatcgtgatctccttcgtgtacggc
tgggaactcacgcttctcatcctggccatcgtgccgttcgttggggcggctggcttcctg
gagatgcaggcccttaccggccaggccaaccgtgacaagaagctgctggaggaagctggc
aagatagcgaccgaggccgtggagaatatcaggacggtcgcctccttgacgcgggagcgc
accttggagaagatataccaggatagcctggaagggcctgccaagacagcgaagaagaag
tcgcagttctacggtttgacatacggcttctcgcagggagtcgtgtacctcgcccaagct
gccgccttccgctttggggccttcctcgtcacggcaggccgcatggagtttgaaaatgtt
ttcttggtgttttcggcgatcgtgtttggagccatggctgttgggcagacgagctccttt
gcccctgattacgccaaggccaagacatcggccaaccacctcttttacctattccagctg
attcctgcgatcgacagctacagcgatgagggggaaaagctggaggactgtgaagggaac
gttgagttccagagcgtgggcttcaactacccgatgcggcccaatgtggaggtgctcaag
ggcttgtccttgaaggtggaaaatggccaaacgctggcgcttgtgggcagcagcggctgc
ggaaagagcacaagtgtgcagctgctggagaggttctacgacacgctgagtgggaacgtg
cttatcgatggcaaagacgtgcgctcgctgcacatccagtggcttcgggcgcagatgggc
atcgtatcgcaagagccggtgctctttgactgcagcatggccgagaacattgcgtatgga
gacaactcgcgcatcgtgccacaggatgagatcgtggctgccgcccgcgccgccaacatc
cacaccttcattgacagcctccccgagaagtacaatacaaaggtcggagacaaggggaca
cagctgtcgggtggtcagaagcaaagaatagcgattgcgagggctctcgtccggcagccc
aagatcctcctgctggatgaagcaacgtcagcccttgacacggagagcgagaagattgtg
caggaagcacttgaccgggcacgggagggccgcacgtgcatcgtcattgcgcaccgcctc
tccacggtgcaaaccgccgacaagatcgctgtcattcagaacggacaggttatcgagcag
ggcacacaccagcagctgctcgccaaaaagggcgcttaccacttgctcgtcaatgcgcaa
gtctctcaaatatga
DBGET
integrated database retrieval system
