Petromyzon marinus (sea lamprey): 116947477
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Entry
116947477 CDS
T09614
Symbol
TBC1D25
Name
(RefSeq) TBC1 domain family member 25 isoform X1
KO
K24799
TBC1 domain family member 25
Organism
pmrn
Petromyzon marinus (sea lamprey)
Brite
KEGG Orthology (KO) [BR:
pmrn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmrn04131
]
116947477 (TBC1D25)
Membrane trafficking [BR:
pmrn04131
]
Others
Rab GTPases of specific organelles
Auto phagosome
116947477 (TBC1D25)
BRITE hierarchy
Motif
Pfam:
RabGAP-TBC
Motif
Other DBs
NCBI-GeneID:
116947477
NCBI-ProteinID:
XP_032819166
EnsemblRapid:
ENSPMAG00000028604
LinkDB
All DBs
Position
30:3714150..3725061
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AA seq
712 aa
AA seq
DB search
MAGINLNDEYDVVRVKVKKFDGLMQPEFRTFSVDPQITSLDVLHHILVRAFELSGKKNFV
LSYLCQEPGGEEMYLSMFSDWDLKSAFGSASKPFLQLRIDVKPFEESPVLEDWDIISPKE
LPGSEVTLWERKSLNVGPIPLLTQSLISQVGRTLSKVQQVLSWSYTEDVARPLKPPLGDA
EFHSFLSRDGQLVRPEELRLRVYHGGLEPSLRKVVWRHLLNVYPEGLTAQERLDYMKKKS
KEYEALKSQWSMQANKEELEFTVGMVLKDVLRTDRTLPYYAGSDDNLHVRALHDLLITYA
VNHPRVSYCQGMSDIASPILFIMDNEAHAYVCFCGIMKRLRGNFLPDGEVMSTKFRHLAL
LLRFYDPEFHNYLVSCGASDLLFCYRWLLLDLKREFAFEDALRMLEIMWSSLPPDPPQVE
LELKGAPLDGTECSQQAPHRRMVRPQMTSTACRTAGAAPGTFPAQPRAALAKSQPENYQT
PTLTPTGAGAAIASVGAVPNGNVFQMAPCPVGNLNVAARDERCLGLVAGRRPSLRKSSGS
AASEISEEDEDEEKPLMSPKMLEPDPDTSALEQMRRSASSLSLSFKASLLSVAGHKLSNA
PPALINAKAIEPGSPVVQPAQSLPPPPEFGKGNPFVLFMCLAILLEHRDHIMRNALDYND
LAMHFDRLVRKHNVGKILHRAKELFADYLRGETWCSEEGAEVQAADVEQASR
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atggcgggaatcaacctcaacgacgagtacgacgtggtgagggtcaaagtgaagaaattt
gacggactgatgcaacccgagttcaggaccttctctgtggaccctcagatcacatccttg
gacgtcctgcatcacattttagtccgagccttcgaactaagcggaaagaagaactttgtg
ctgagttacctgtgccaggagccgggcggtgaggagatgtatttgtccatgttctccgac
tgggatttaaagtctgcatttggcagcgcgtccaagcccttcctgcagctccgcatcgac
gtgaagccttttgaagagagtcccgtgctagaagactgggacatcatcagccccaaggag
ctgccgggcagcgaagtgaccctctgggagcgaaagagcctcaacgtcgggcccatcccc
ctgctgacacagtccctcatctcacaggtggggcgcacgctctccaaggtgcagcaggtg
ctaagctggtcgtacacggaggacgtggcgcgacccctaaagccgccgctgggcgacgcg
gagttccactcgttcctgagccgcgacgggcagcttgtgcggcccgaggagctgcgtctg
cgcgtctaccatggcggcctggagccatccctgcgcaaggtcgtgtggaggcacctgctc
aacgtgtacccggagggcctgacggcgcaggagaggctggactacatgaagaagaagtcc
aaggagtacgaggcgctcaagagccagtggagcatgcaggccaacaaggaggagctggag
ttcaccgttggcatggtcctcaaggacgtgctcaggactgaccggacgctgccgtactac
gccggctccgacgacaacctgcacgtgcgtgcgctgcacgacctgctcattacgtacgcc
gtcaaccacccgcgcgtctcctactgccagggcatgagcgacatcgcctcgcccatcctc
ttcatcatggacaacgaggcgcacgcgtacgtgtgcttctgcggcatcatgaagcgcctg
cggggaaacttcctgcccgacggcgaggtcatgtccaccaagttccggcacctggcgcta
ctgctgcgcttctacgaccccgagttccacaactacctggtgtcgtgtggcgcgagcgac
ctcctcttctgctaccgctggctgctgctcgacctgaaacgcgagttcgccttcgaggac
gcgctgcgcatgctggagatcatgtggagctcgcttccgcccgatcctccgcaggtggag
ctcgagctgaagggcgcccccctcgatggcacggagtgcagccagcaggcgccgcaccgc
cgcatggtgcggccacagatgacctccaccgcttgcaggactgctggtgctgcccccggc
acgttccccgctcagccccgcgccgcccttgccaagtcccagccggagaactaccagacg
cccacgctgacgcccacgggagccggcgccgccatcgcctccgtcggcgcggtgccgaac
ggaaacgtgttccagatggcgccttgcccggtgggaaacctgaacgtggccgcccgcgac
gagcggtgccttggcctcgtagcgggcaggcggccctcgctgaggaagtcgtccgggagc
gccgcgtcggagatatcggaggaagacgaggacgaggagaagccgctgatgagccccaag
atgttggagcccgaccccgacacgagcgcgctggagcaaatgaggcgttcggcgagcagc
ctgtcgttgtcgttcaaggcgtcgctcctctcggtggccgggcacaagctcagcaacgcg
ccgcccgccctgatcaacgccaaggcgatagagccgggctcgcctgtggtgcaacccgcg
cagtcgctgcctccgccgccggagtttggcaagggcaacccgtttgtgctcttcatgtgc
ctggccatcttgctcgagcacagggaccacataatgcgcaacgcactcgactacaacgac
ctggccatgcacttcgaccggcttgtgcgcaagcacaacgtcggcaagatcctgcaccgc
gccaaggagctgttcgccgactacctccgtggggagacgtggtgctcggaggagggcgca
gaggtgcaggcggccgatgtagagcaggcgtctcggtag
DBGET
integrated database retrieval system
